Mastomys coucha (southern multimammate mouse): 116091326
Help
Entry
116091326 CDS
T07224
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116091326 (Chd6)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116091326 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
116091326
NCBI-ProteinID:
XP_031228483
LinkDB
All DBs
Position
Unknown
AA seq
2704 aa
AA seq
DB search
MFYLPGIYPKLSKLRALNHSPMSDASVNFDYKSPSPFGDCSPDQGENIEETANHCLPQKD
LYTTEEEADTLFSRKLTSQNGMEDSGGRGTGVKKKRKKKEPGEQEGTKGSKDREPKPKRK
REPKEPKEPRRAKEAKRAKEPKETKQKDGVKKPRKPREASGTKEGKEKRNCTDYGSRTKS
KKASKEQGPTPVERKKKGKRKNETTVESLELDQSLPNSSLQSLEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQVLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRSSEMDL
INKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRVISRLDKKSDESLEHYFYS
FVAMCRNVCRLPTWKDDGPPDASIYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DSQAPGSVCCLYQSNSKLYESLTYTPMSRTSESLESEPENLIKMESRNDHLCLPEGGLPD
ITCENFVSKVQEVISLDHDESLLPESLENMIYGKTGLSQEPRSFQEAPSTNTQSRKNTIT
ISASRDERCQPPGTEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISKEGEPCCSETGR
SPESIGRLEAKCLASPPLDTGHESGFVDLCSLSVYDSKRNFSSDQQLIDLLENKSLESKL
ILNQSDEEEEENEDEALAIVAGTTEKLEVLDFTKPTANIPRGKNLGFHQDEVKKGRLEVV
SKTPGPQRVFPPSANQCHCKHMERWTHGLGSEESAVEKPKAYQPDLYRNKANNPTVEGEP
AVIPTEPFKLKHELLKEPWKESSEGGKSFSMYVPEGSEPKPEDMDFENKDDYEKDGPCHS
QDYPGRYSEEESKSSASGITGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRL
DNICHVVLKGKWPCSHQYEPSGALPTPVLSSSAGSRSSLSEPEATEHSFSNGAALAAQIQ
KESFLAPVFTKDDQKHRRPYEFEVERDAKARSLEEYSAAHGRPPIVLNGWHGESAVDLSC
SSEGSPGSASTPKIGTISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRR
GRRKHIEGGMDLIFLKEQTLQAGILEVHEDAGQTTLSTTHPEGPGAVSSAPEPAAAASSQ
AEKAVPSKSLLDWLRQQADYSLDVPAFGASFSDKPKQRRPRCKEPGKLDISSLGGEERVP
AVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAIVADSPSGMGPLF
MNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPMMLPGMAAV
PQMFGVGGLLNTPMATTCTTAASASLASTKSGTSATEKTTEDKLSGHDVNADTLVEDKPG
PSPFSDQSEPTITTSGPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPTMQQARHSEMVG
LETQKRKKKKTKGDNPTPEPASACEKEPGSDQNCTESSATVSPEREHVAQAREEGLKDSN
NDTK
NT seq
8115 nt
NT seq
+upstream
nt +downstream
nt
atgttttacctgccaggaatttatcctaagttgtccaagttaagagctttgaaccactcc
ccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccatttggcgattgc
agtcctgatcagggagagaatatcgaagaaactgccaatcattgtctgccccagaaagac
ctctatactactgaagaggaagctgacacccttttctctaggaaattgacatcccagaat
gggatggaggacagtggaggcagaggtactggagtaaagaagaaacggaagaaaaaagag
ccaggggagcaagagggaacaaagggaagcaaggacagggagcctaagccaaagaggaaa
cgagaacctaaagagcctaaagaacccagaagggccaaggaagccaagagagccaaggag
cccaaggagacaaagcagaaagatggtgtgaagaagccccgcaagccccgggaggcctcc
ggtaccaaggaaggtaaagagaagaggaactgcactgattatggatccaggacaaagtcc
aaaaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaacgaaaccaccgtggagagtttagagctggaccagagtcttccaaactcatctctg
cagagtcttgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgatgatggggag
acaatcgctgttttgggagctggccggacatctgcactctcagcttccactctggcctgg
caggctgaggagcctccagaagatgatgcaaacataattgagaagatcctggcatccaag
actgtccaggaggttcacccaggagaacctccattcgacctagagcttttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagagctggaaaaggat
ccccgcatcgcacagaagatcaaacgatttaggaacaaacaggcccagatgaagcacatt
tttaccgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatctta
gaggtggcccacaccaaggatgcagaaacaggggaggaagtaacacattacctggtaaaa
tggtgctccctaccatatgaagaaagcacctgggagctggaagaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccctgaagttaagcacgtggaacgacct
gcctctgacgcgtggcagaaactggagacatctcgtgagtataagaacagtaaccgactg
cgggagtaccagctcgaggggatgaactggcttcttttcaactggtacaacagaaaaaac
tgtatattggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccatggcccctttctcatcattgcgccactttccaccatc
actaactgggagcgagaattccggacgtggacagagatgaatgctattgtgtaccacggc
agccagatcagcaggcagatgatccagcagtatgaaatggtgtaccgagatgcacaggga
aaccccctttcaggagtcttcaagttccatgttgtcatcacaacatttgagatgatcctg
gcagattgcccagagctgaagaaaattcactggagctgtgtgataattgatgaggcccac
aggttgaagaataggaactgcaaacttctggaagggttaaagctcatggccctggaacac
aaagtgctgctcacaggaacaccgttacagaactctgtggaagagctcttcagtttgctt
aactttctggagccctcacagtttccttcagagactgctttcttagaggagtttggcgat
ctcaaaacagaagaacaggtaaagaaattgcaatctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtagaaaagaaccttgctcctaagcaagagaccatcattgaagta
gaactgaccaatatccagaaaaagtactatcgtgctatcctagagaaaaacttctccttc
ctgaccaaaggtgcaaatcagcacaacatgcccaatcttatcaatactatgatggagctg
agaaaatgctgtaatcacccctacctgatcaatggagcagaggaaaagattctggaagat
ttcaggaaagcccacagctccgaagcctctgactttcagctgcaggccatgatccaggcc
gcggggaagctggtgctgatcgacaagcttctccccaagctcattgcagggggccacaaa
gtgctcatcttctctcagatggtgcgctgtctcgacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtcttccttctgtgcaccagagca
ggaggcctgggaatcaatctcacagctgctgacacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccggtgtcatcgtataggccagagcaaagcc
gtgaaagtgtatcgtctaatcactcgaaactcctatgagcgggagatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggagtacagcagctctcaaagatggaagtggaggatttgctccggaaaggtgcatat
ggagctttaatggacgaggaggacgaaggctccaagttctgtgaagaagacatagaccag
attctacagagaagaacccacaccatcaccatccagtcagaagggaaggggtccactttt
gccaaggctagttttgtggcttcaggaaacagaaccgatatttccttggatgatcctaat
ttttggcagaaatgggctaaaatcgctgaattagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccggccacgtgtgaggaagcagaccaaacactacaactcttttgag
gaggatgagcttatggagttctcagagttagacagtgactctgatgaaaggcccacaagg
tccaggcgccttagtgacaaagccagacgctacctccgcgctgagtgcttccgagtagaa
aagaacctgctcatctttggctggggccggtggaaggacatcctgactcatgggcgattt
aagtggcccctgaatgagaaggatatggaaatgatttgccgggccctgctggtatactgt
gtcaagcattacaaaggggatgaaaaaatcaagagttttatttgggagctaatcacacct
tccaaagacgggcaagttcaggtcctccagaaccactcaggcctgtctgccccagtcccc
agaggaaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgca
gactggctggccacctgcaatcctgaggtggtcctacacgatgatggctacaagaaacac
ctcaagcagcactgtaacaaggtgcttctgagagtccggatgctatactacctaaaagct
gagatactgggagaagcagccgataaggcatttgagggaactcctgccagagagctggat
gtgcttctgccagacattgactatgtggagatcccagtggactggtgggatgccgaagca
gataagtcccttctcattggcgtgttcaagcacggttatgagaggtacaatgccatgcgg
gctgacccagcgctctgcttcctggagaaagtcggcatgcctgatgagaagtccctttct
gcagagcagggtgttacagatggaacttcggacattcctgaaagaggcaacatcgataag
gaagacagtgctgaggacaagttagatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctcc
gacccagacaaatcaccctggccagtttcctctgcccttactgctcgacttaggcgtctg
gtcactatttaccagcgctgcaaccgcaaggagctgtgcagacctgaaatcttaggccca
ggtaaccaaggttactgggttcaggaggaagtgttcaggagatcttcagaaatggacctc
atcaacaaggaagctcaaaagaggtggactagaagagagcaagccgacttctatagaaca
gtatcttcctttggtgttgtgtatgaccaagaaaagaaagcctttgactggacacagttc
cgcgtcatttctcgtttggacaagaagtcagatgagagcctggagcactatttttatagt
tttgtagccatgtgtcggaatgtgtgtcgtctccccacgtggaaagatgatggtccccct
gatgccagcatctatgttgaacccatcactgaggagcgggcagcaaagactctgtaccgc
attgaactgctgaggaaagtccgtgagcaggtgctcacttgtcctcaactacatgagcgc
ctccagctttgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgat
cgagacctgctcattggcaccgccaaacatgggctcaaccgcactgactattacatcatg
aatgacccccagctatccttccttgatgcctatagaaactatgcccaacacaaaagaact
gactcccaggcacctggaagtgtctgttgcctttaccagagcaattctaaactatatgag
tctcttacttataccccaatgagtaggacttcagagtctcttgaaagtgagccagagaat
ctgataaaaatggaaagcaggaatgatcatctctgcctgcctgagggtggtttgcctgac
ataacatgtgagaattttgtttccaaagttcaagaggtcatttctcttgaccatgatgag
agcttgctgcctgagtctttggagaacatgatatatggtaagacaggactcagccaagag
ccgcgttcttttcaggaggccccaagtaccaacacacagtccaggaaaaatactatcacc
atctcagccagcagagatgagagatgccagcctcctggtactgaggcagaaattacttca
gcttcctctctcatgagcagcttagaagcaggagtagctaaaatgaatattaaaaatgga
aaacatttgttggtatctatctcaaaagaaggggagccctgctgcagtgagacagggcgg
agccctgaaagcataggccgcctggaagccaaatgcttagcatcccctcccttagataca
ggacatgaaagtgggtttgtagatctgtgcagtcttagtgtctatgactccaaaagaaac
ttctcatcagatcagcaactaatagacttattagaaaacaagagtttagaaagtaaattg
attttgaatcagagtgatgaagaagaggaagaaaatgaggacgaagccttagccatagta
gcaggcaccacagaaaagctagaggtcttagatttcaccaagcccactgcaaacatccca
aggggaaagaacctcggcttccaccaggatgaagtcaagaaaggaaggctggaggtggta
agcaagactcctggaccacagagggtctttcctccctcagccaatcagtgccactgcaaa
cacatggaaaggtggacacatggcctggggagcgaggaatctgcagtagagaaacccaag
gcttatcagccagacctgtacagaaacaaagccaataatcccacagtggaaggtgagcct
gctgttattccaacagagccatttaaactgaagcatgagcttttaaaagaaccatggaaa
gaaagttcagagggggggaagagcttctccatgtatgttcctgagggaagtgaacccaag
ccagaagacatggattttgagaataaagatgattatgagaaagatggaccctgccacagt
caagactacccaggcagatactctgaggaagagagtaagagttcggcgtcaggcattaca
ggagaccttggggaagaggcgcaggaagtgcgggctcccaccattgctcagctactgcag
gagaaaaccctgtattccttctcagaatggccaaaggatcgtgtgataattaaccgccta
gataatatttgccatgtggtattaaaggggaagtggccctgcagtcaccagtatgagccc
tcgggtgcactgcccacgccagtgttgtccagcagtgcaggttctcggagcagcctctca
gagccagaagcaacagaacacagcttcagcaatggtgcagcattggcagcccagatccag
aaggagagcttcttagctccagtattcacaaaagatgaccaaaagcacagacgcccctat
gagtttgaggtggaaagggacgccaaagctcggagtctagaagagtactctgccgcccat
ggacgtccacccattgtcctcaatggctggcatggggagtcagctgtagacctctcctgc
tcatcagaggggtctccagggagtgccagcacccctaagattggtactatcagttcactt
caaggagccctcggtatggacttgtctggaattctgcaagctggtctaatccacccagtg
actggacagattgtcaatggaagcctcaggagggatgatgctgccatgagaaggcggaga
gggaggcggaaacatattgaaggagggatggatctcatctttctgaaggagcaaacactt
caggctggaatcttggaagtccatgaagatgcagggcagactaccctgagcaccacacac
cctgaagggccaggagctgtctcctcagctcctgagccagcagcagcagccagcagccag
gctgagaaagctgttcccagcaagagcctacttgactggctgcggcagcaggctgactac
tctttggatgttccggcctttggggcaagtttttcagacaaacccaagcagaggagacca
cgctgcaaagaacctggaaaattagacatcagctctctaggtggagaagagagggttcct
gctgtccccaaggagccaggactgagggggtttctcccagaaagcaaattcaatcacacc
ctagctgagcctgtgcttcgagatgcaggcccccgcagaagggggaggcggcctcggaat
gaactcctaaaagctccagccattgtagcggactccccttctggaatgggaccactgttc
atgaatgggctgattgcagggatggacctggtaggattgcagaatgtgagaaatattcca
ggcattcctctcactgggctagtgggcttcccagctggttttgctaccatgcctactggt
gaagaggttaaaaacaccctgagcatgctgcccatgatgctgccaggcatggccgcagtg
ccccagatgtttggtgttggcggactcctcaacacacccatggcaaccacctgcacgacc
gctgcatcagcgtctctcgcaagcacaaaaagtggtacctcagccactgaaaaaactaca
gaggacaagctgagtggccatgatgtgaatgcagacactctagtagaagataagcctggc
cctagtccgttttctgatcagtctgaacccacaataactactagtggtcctgtggctttc
aacccatttctcatcccaggagtgtctcctggactcatctacccttcaatgtttctttcc
cctggcatgggcatggctctgccaaccatgcagcaggccagacactcagagatggtcggg
cttgagacccagaagaggaaaaagaagaaaacaaagggggacaaccccaccccagagcct
gcttctgcgtgtgagaaggagccaggcagtgatcagaactgcaccgagtccagtgccact
gtgtccccagagagagaacacgtggcacaggccagggaagaggggctcaaagactccaac
aatgataccaagtag
DBGET
integrated database retrieval system
