Mastomys coucha (southern multimammate mouse): 116095070
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Entry
116095070 CDS
T07224
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116095070 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116095070 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116095070 (Usp13)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116095070 (Usp13)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116095070 (Usp13)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116095070 (Usp13)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116095070 (Usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
116095070
NCBI-ProteinID:
XP_031232442
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MQRRGALFSVPGGGGGKMAAGDLGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGG
LYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKIRGASGGALPKRRNSKIFLDLD
MDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDT
WENEVPVSKYANNLVQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGG
NGHALEHYKDMGYPLAVKLGTITPDGADVYSFQEEGPVSDPHLAKHLAHFGIDMLHTQGT
ENGLRDNDVKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQ
RAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQ
NGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERI
QCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELMRREAEANRRPLPELVRAKIPF
SACLQAFAEPDNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPRKFDV
SIDMPDLLDISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQL
AEMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLAIPGYGGAGASVFGATGL
DNQPPEEIVAIITSMGFQRNQAVQALQATSHNLERALDWIFSHPEFEEDSDFVIEMENNA
NANIMSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHKVCA
SERPPKDLGYMYFYRRIPS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcgtaccgggcggcggcggcgggaagatggctgca
ggggacctgggcgagctactggtgcctcatatgcccacgatccgcgtgcccaggtcgggg
gaccgcgtctacaagaacgagtgcgccttctcctacgactccccgaactctgaaggtgga
ctctatgtatgcatgaatacatttttggcctttggaagggaacacgttgaaagacatttt
cgaaaaactgggcagagcgtatacatgcatctgaagaggcacatgcgagagaagataaga
ggagcctctggtggagctttacccaaaaggaggaattccaaaatatttttagatctagat
atggatgacgatttaaatagtgatgattacgaatatgaagacgaagccaaacttgttata
ttcccagaccactatgaaatagcccttcctaacattgaagagttaccagccctggtaaca
attgcttgcgacgcagtgctcagctcaaagtccccgtacaggaagcaggatccagacacg
tgggaaaatgaagtgccggtatcaaagtatgccaacaacctcgtgcagctggacaacggg
gtcaggattcctcccagtggctggaagtgtgcccgatgtgacctgcgggagaacctctgg
ttgaatctgactgacggctctgttctgtgtgggaagtggttttttgacagctcagggggc
aatggccatgcactggagcattacaaggacatgggctatcctctggctgtgaagctgggc
accatcacacctgatggggcagatgtttattcttttcaagaagagggacctgtttcagat
cctcatttggccaaacacttagcacattttgggatcgacatgcttcacacgcaagggaca
gagaacgggctccgggacaatgatgtcaagcccagagtcagcgagtgggaagtgatccag
gaatcagggactaagctgaagccgatgtacggcccagggtacacgggcctgaaaaacctg
ggcaacagttgctacctcagttctgtcatgcaggccatcttcagcatcccagaattccag
agagcgtatgtaggaaacctcccaaggatatttgactactcgccattagatccaacgcag
gacttcaacacacagatgactaagttgggacatggcctcctctctggtcagtactcgaag
cctccagtgaaatctgagctcattgaacaggtgatgaaggaggagcacaagcctcagcag
aatgggatctcgccacgaatgttcaaggcctttgttagcaagagccacccagaattctcc
tccaacagacaacaggatgcccaggagtttttcttacatttggtcaatctggtagagagg
aatcgcattggctcagaaaacccaagtgatgttttccggtttttggtggaggaacgaatt
caatgctgtcagaccagaaaggtccgctacacggagagggtggactaccttatgcagtta
cccgtggccatggaggcagcaaccaacaaagatgagctgatcgcctatgaactaatgcgg
agggaagcagaagccaacaggagaccccttcctgagctggtgcgagccaagatcccattc
agtgcctgccttcaggcctttgctgaaccagacaatgtggatgatttctggagcagtgct
ctgcaggccaagtctgcaggggtcaaaacttctcgctttgcctcattccctgaatacttg
gtagtgcagataaagaagttcacttttggtcttgactgggttcccagaaaatttgatgtg
tctattgatatgccagacctactagatatcagccacctcagagccaggggcttgcagcca
ggggaagaggagcttcctgacatcagtccccccatagtcattcctgatgactcaaaagac
cgcttgatgaaccagttgatagacccctcagacattgatgagtcctcagtgatgcagctg
gctgagatgggcttccctttggaagcctgcaggaaggctgtgtacttcactgggaacact
ggagctgaggtggccttcaactggatcatcgtgcacatggaggagcctgattttgctgaa
ccactggccatacctgggtatggaggggctggggcctctgtctttggtgctactggattg
gacaaccaacctcctgaggaaatcgtagctattatcacctccatgggattccagcgcaat
caggcagtacaggctctacaagcaacgagtcataacttggaaagagcgttggactggatc
ttcagccaccccgagtttgaagaggacagtgactttgtgattgagatggagaacaatgcg
aatgcaaacatcatgtctgaggccaagccagagggacctagagtcaaggatgggtctgga
atgtacgagttgtttgcattcatcagtcacatgggaacatctacaatgagtggccattat
gtttgccatatcaaaaaggagggacgatgggtgatctacaatgaccataaagtttgtgcc
tcagaaaggccccctaaagacctgggttatatgtacttttaccgcaggataccaagctaa
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