Mastomys coucha (southern multimammate mouse): 116102807
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Entry
116102807 CDS
T07224
Symbol
Usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116102807 (Usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116102807 (Usp47)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116102807 (Usp47)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116102807 (Usp47)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116102807 (Usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Sad1_UNC
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
116102807
NCBI-ProteinID:
XP_031243747
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKAVSERI
TLNLPASTPVRKLFEDVANKVGYINGTFDLTWGNGVNTADTAPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEQPQMLLEDSSNVDDGVHDRFIGPLPREGSVASTSDYVSQSYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTF
IDIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDTVDEGICLESSSGSEKISKPGL
EKVEMAETDQRKDSIQFQLGEPNSLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFN
DQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVDEYPE
HIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEM
AYKMMDLEDVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETR
KPDQIFQSYKPGEVMVKVHVVDLKAETVAAPVTVRAYLNQTVTEFKQLISKATHLPADSM
RIVLERCYNDLRLLNVPSKTLKAEGFFRSNKVFVESSETVDHQAAFTDSHLWKLLDRHAN
TIRLFVLLPEQSPGSYSKRTAYQKAGGDSGNVDDDCERVKGPAGNLKSVDAILEESTEKL
KSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERGSSTSVDNRELEQHIQTSDPEHFQS
EERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSTQIPLANGLDSHSITSSRRTKANE
GKKETWDTAEEDSGTDSEYDESGKSRGDMQYMYFKADPYTADEGSGEGHKWLMVHVDKRI
TLAAFKQHLEPFVGVLSSHFKVFRVYTSNQEFETVRLNETLSSFSDDNKITIRLGRALKK
GEYRVKVCQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLDLSIDRFRLRK
KTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAILTRRWRPAEMKLD
PFQELVLESNSVDELREKLSEISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVST
LNVWPLYICDDGAVIFYRDKTEEVMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKAL
KIYLDGAPNKDVAQD
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaagacactactaactcaaaggcagtgagtgaacggatc
acattaaatttaccagcatctaccccagtcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttgacatggggaaatggagtcaatactgctgat
acggcaccactggatcataccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacagcctcagatgttgttggag
gactccagtaatgtggacgacggcgtgcatgacaggttcataggtccacttccaagagaa
ggttctgtggcctctaccagtgattatgtcagccagagctactcctattcatcaattttg
aacaagtcagaaactggttatgtgggactagtaaaccaggcgatgacgtgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataaatgggaa
tttgaagaatctgaagaagatcctgtgacgagtatcccataccagcttcaaaggcttttt
gttttgttgcaaaccagtaaaaagagagcaattgagaccacagacgttacaaggagcttt
ggatgggatagcagtgaagcttggcaacagcatgatgtacaggaactgtgccgtgttatg
tttgatgctttggagcagaaatggaagcaaacagaacaggctgatcttataaatgagctg
taccaaggcaagctgaaagactatgtgaggtgtctggaatgcggttatgaaggctggaga
attgacacgtatcttgatattccactggtcatccgaccttatgggtccagccaagcgttt
gctagtgtggaagaagcactacatgcatttattcagccagagatcttggatggcccaaat
caatatttttgtgaacgttgtaagaagaagtgtgatgctcgtaaaggccttcggtttttg
catttcccctatctgctgaccttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaactgaatgatcgaatgtcatttccagaggagctggatatgagcacattt
attgatattgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcagaa
aatgaaggcagttgccacagcgaccagatgagcaatgatttctccacggatgatactgtt
gatgaagggatatgtctggagagcagtagtgggagcgagaagatttcaaaacctggcctg
gaaaaggtagaaatggcggagacagaccagagaaaggattccatccaattccagcttggt
gaaccaaactccctgatgtatgagctcttctcagtgatggtgcattcagggagtgctgct
ggaggacactattatgcttgcataaagtctttcagtgacgatcagtggtacagtttcaat
gaccaacatgtgagcaggataacacaagaagacattaagaagacacatggtgggtcttca
ggaagcagaggctactactccagtgcttttgcaagctcaacaaatgcatatatgctgata
tacagactaaaggatccaacaagaaatgcaaaatttctagaagtggacgagtacccagaa
cacattaagaacctggtgcagaaggagagagaattagaagaacaggaaaagaggcaacga
gaaattgaacgcaacacatgcaagataaaattattttgtttacatcctgtgaagcaagta
atgatggaaaacaagttggaggttcataaggataagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagatgtgattcccctggattgctgtcgcctggtaaaa
tatgatgagtttcatgattacctggaacgatcgtatgagggagaagaagacacgccaatg
gggctgcttctaggaggagtcaagtccacttacatgtttgatctgctgttggagacaaga
aagcctgatcaaatttttcagtcttacaaacctggagaagtgatggtgaaagttcatgtt
gtcgatctgaaggcagagactgtcgctgctcctgtaacagtgcgtgcgtatttaaatcag
acagttacagagttcaaacagctgatctcaaaggccacgcacttacctgcagactccatg
agaatagtgctggagcgctgctacaatgacctgcgccttctcaacgtgcccagcaagacc
ctgaaggctgagggcttcttcagaagtaacaaggtgtttgttgaaagctctgagacagtg
gatcaccaggcagccttcacagactcccacttgtggaaactcctggatcgacatgcaaat
acaatccggttatttgttttgctgcctgaacaatctccaggatcttattcgaaaaggaca
gcataccagaaagctggaggtgattctggtaatgtggacgatgattgtgaaagagtcaaa
ggacctgcagggaatttaaagtctgtggatgctattctagaagaaagcactgaaaaactc
aaaagcttgtcattgcagcagcagcaggatggggacaacggagacagcagcaaaagcact
gagacaagtgactttgaaaatattgaatcccctctcaatgagaggggctcttccacctct
gtggataatcgagaacttgaacagcacattcagacttctgacccagaacactttcagtct
gaagaacgctcagactcagatgtgaataatgaccggagtacaagttcagtagacagtgat
attcttagctccagtcacagcagcgacactttgtgcaatgcagacagcactcagattcct
ctggccaatggactcgactctcacagtatcacaagtagtagaagaactaaggcaaacgaa
gggaaaaaagagacatgggacacagctgaagaagactctgggactgacagtgaatatgac
gagagtggcaagagcaggggggacatgcagtacatgtacttcaaagctgacccctacact
gcggacgaaggctctggggaaggacacaaatggttgatggtgcatgttgataagagaatc
accctggcagctttcaaacagcatttagagccctttgttggagtcctctcctctcacttc
aaggtttttcgagtgtacaccagcaatcaagagtttgagaccgtccggttgaatgagacc
ctttcatcattttcagatgacaataagatcacaatccgactggggagagcactgaagaag
ggagagtacagagttaaagtgtgccagctcttagtcaatgagcaagagccatgcaagttt
ctgctagacgctgtatttgctaaaggcatgactgtgcggcaatcgaaagaggagctgatt
cctcaactcagggagcagtgtggcttagacctcagcatcgacaggtttcgtctaaggaag
aaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaagatatt
aatatttccagtaactgggaagttttcctggaagttcttgatggtgtggagaaaatgaag
tccatgtcacagctggccatcttaacaagacgttggaggcctgcagaaatgaaattggat
cccttccaggagcttgtgttggagagcaatagtgttgatgaacttcgagagaagctaagt
gaaatcagtgggattcctttggaagacattgaatttgccaagggtaggggaaccttcccc
tgtgatatttctgtccttgatattcatcaagatttggactggaatcctaaagtctctacc
ctgaacgtttggcctctttatatttgtgatgatggtgccgtcatattttatagggataaa
acagaagaagtaatggaattgacagatgagcaaagaaatgaattgatgaaaaaggaaagc
agccgactgcagaagacgggacatcgtgtgacatactcccctcgaaaagagaaagcactc
aagatctacctggatggggcgccaaataaagatgtggctcaagactga
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integrated database retrieval system
