Mastomys coucha (southern multimammate mouse): 116102832
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Entry
116102832 CDS
T07224
Symbol
Sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116102832 (Sox6)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116102832 (Sox6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116102832
NCBI-ProteinID:
XP_031243837
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MQSCWNKGNVEMKERGRERLADVMRRGEGVRRRALPRLLPSALTAALGNSQANTNSFSPA
ACPLSLRMSSKQATSPFACTADGEETMTQDLTSREKEEGSDQHPASHLPLHPIMHNKPHS
EELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSREREIMN
SVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSEL
LGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQ
QEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPP
GITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINPRLKGISDRFGRNLDPY
EHGGGHSYNHKQTEQLYAAQLASMQVSPGAKMPSTPQPQNSAGAVSPTGIKNEKRGTSPV
TQVKDETTAQPLNLSSRPKTAEPVKSPTSPTQSLFPASKTSPVNLPNKSSIPSPIGGSLG
RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHGADGKLSSMNNMAL
SNCRNEKERTRFENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYC
WPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI
LGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLM
RSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLP
VIQSTYGMKMDGTSLAGNDMINGEDEMEAYDDYEDDPKSDYSSENEAPEPVSAN
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgctggaacaaagggaatgtggaaatgaaagagagagggagagagaggctg
gcagatgtaatgagacgcggtgaaggtgtacgcagacgggcactcccacgcctcctccct
tcggctctcactgcagccctgggtaactcgcaggctaacacaaacagcttttctcccgca
gcctgccctctgtcactaagaatgtcttccaagcaagccacctctccatttgcctgtaca
gcggatggagaggaaacaatgacccaggatttgacctcaagggaaaaggaagagggcagt
gatcaacacccggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctgccgacacttgtcagtaccattcaacaagatgctgactgggacagcgttctg
tcatctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacgtctacctcaccacataagcctgacgaagggagtcgggagcgcgaaataatgaac
agtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtggtggatacg
ctgaagcagaagaagctggaggagatgactcggacggaacaagaggattcctcctgcatg
gaaaagctactttcaaaagattggaaggaaaaaatggaaagactaaatacaagtgaactt
cttggagaaatcaaaggtacacctgagagccttgcagagaaagaacggcaactctccacc
atgattacccagctgatcagcttgcgggagcagctcctggcagcgcatgatgaacagaaa
aagctggcagcatcgcagatcgagaaacagcggcagcaaatggaccttgctcgccaacaa
caagagcagatcgcaagacaacagcaacaacttctacagcagcagcacaagattaatctc
ctgcagcaacagatccaggttcaggggcacatgcctccgctcatgatcccaatttttcca
catgaccagcggaccttggcagcagctgctgccgcccaacagggattcctcttcccccct
ggaataacatacaagccaggtgataactaccccgtacagttcattccgtcaacaatggca
gctgctgctgcttctggactcagccctttacagcttcagaagggtcatgtctcccaccca
caaattaatccaaggctaaagggcataagtgaccgctttggcaggaatttggacccctat
gaacatggtggtggccactcttacaaccacaaacagactgagcagctctatgccgctcag
ctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccacaaaac
tcggcaggggcagtctcacctactgggataaaaaatgaaaagagagggaccagccctgta
actcaagttaaggatgaaacaacagctcagccgctgaatctctcatcccggcctaagaca
gcagagcctgtgaagtccccaacgtctcccacccagagcctctttccagccagcaaaacc
agccctgtcaacctgccaaacaaaagtagcatccccagccccattggaggaagcctgggg
agaggatcctctttagatatactatccagtctcaactctcctgccctatttggggaccag
gacacagtgatgaaagccattcaggaggctcggaagatgcgagaacagatccagcgggag
cagcagcagcagccacatggagctgatgggaagctgtcctccatgaacaacatggcgctg
agcaactgcaggaacgagaaggaaagaacccgctttgagaacctgggtccccaattaaca
ggaaagtcaagtgaagatggaaaactgggcccaggtgtcatcgatctcactcgaccggag
gatgcagagggaagcaaagcaatgaatggctctgcagctaaactacagcagtattattgt
tggccaacaggaggcgccactgtggctgaagcccgcgtctacagggatgcccgcggccgt
gccagcagtgaaccccacatcaagcgaccaatgaatgcgttcatggtttgggcaaaggac
gaaaggaggaaaattcttcaggccttccctgacatgcataactccaacattagcaaaatc
ttaggatctcgctggaaatccatgtccaaccaggagaagcaaccttactatgaagagcag
gcccggctaagcaagatccacctagagaagtacccaaactacaagtacaaaccccggccg
aagcgcacatgcattgtggatggcaagaagctccggattggggagtacaagcaactgatg
cgctctcgacggcaggagatgcgacagttcttcactgtggggcaacagcctcagattccc
atcaccacaggaacaggtgttgtgtatcctggtgctattactatggcaacaaccacacca
tcacctcagatgacatctgactgctctagcacctctgccagcccagagcccagccttcct
gtcatccagagcacgtatggtatgaagatggacggcacaagcctggctgggaacgacatg
attaatggagaggatgaaatggaagcctatgatgactacgaagatgatcccaaatcagac
tatagcagtgagaacgaggccccggagcctgtcagtgccaactga
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