Mesoplasma coleopterae: MCOLE_v1c05480
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Entry
MCOLE_v1c05480 CDS
T05286
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcol
Mesoplasma coleopterae
Pathway
mcol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCOLE_v1c05480 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcol03019
]
MCOLE_v1c05480 (deaD)
03009 Ribosome biogenesis [BR:
mcol03009
]
MCOLE_v1c05480 (deaD)
Enzymes [BR:
mcol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCOLE_v1c05480 (deaD)
Messenger RNA biogenesis [BR:
mcol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCOLE_v1c05480 (deaD)
Ribosome biogenesis [BR:
mcol03009
]
Prokaryotic type
rRNA helicases
MCOLE_v1c05480 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
AAA_19
ERCC3_RAD25_C
ARMH2
Flavi_DEAD
DUF2608
Motif
Other DBs
NCBI-ProteinID:
ATZ21059
UniProt:
A0A2K8P2V1
LinkDB
All DBs
Position
complement(628099..630030)
Genome browser
AA seq
643 aa
AA seq
DB search
MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL
EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS
QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF
SATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPK
RAIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVA
RGIDITGVDYVINYDVSMEDEHFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFN
LIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRRDSNRGDRRDSGRGDRRDSNR
GRDDRRNAGHNDRKDFAHGERKRTSERLDSRSSAWTSQSWEERMLSLSPEEKEFAKKALS
LVDDYSSNGNSSNNSENSGRRGSNRGRDDRRSSNRGRDDRRSSGRDDRRSSGRGDKRDSN
RGDRKNNNFEGTRHSSWDVKTDYSKQDSGRWERVTGKDKRPASFNDKKGGSDSNRGGDER
RNRRSSGRGEWVHSGPRENKGSGTRNRRNSSSNSSSKKSRNKW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattacaattaagcgacaaagtattagtcgcactggaaaaagctaat
tttaacgaagctacagaaattcaagctagagcaataccacttttcctagaaggaaaaaac
atttttggtaaatcaagcactggtacaggtaaaacagcctcattcgtattaccaatctta
gaaaaaatagaaccaaacaaaagaagagttcaagccgttataatggcaccaacaagagaa
ttagcaatgcaaattgttaaccaaattagaatatttggatcaagaatagaaaatctagta
atagcaccattaataggtggagctgatatgcgagatcaaattaaaagactgaaagactca
caaatagttgtgggaactccaggaagggttaatgaccacttaaatagaaaaactttaaaa
ttagatgatgttagaacaatcattttagatgaagctgatgaaatgctaaaaatgggattt
aaaaacgaaattgatgcattatttgaaagagtttcaccagatgttcaaattggtttattt
tcagctacaacatcaccaaaagtaatgcaaattgctaatgattatatgaatgaatatgac
gttattgaaattgaaaatcaaatagaagttaatgctaatattacaaatacctttattttc
acaaaaggttttagcaaagaagatttaattgttaaagtatttaaaaaacacaaacctaaa
agagctattgttttttcaaacacaaaaaaccatacagataaaattgcagacaatttagaa
gcagcaggaattagagctatagttattaatggtgataaaagacaatcacaaagatcaaga
gctattgcaaaatttagaaacaatgaaatatcagttttagttgcaactgatgttgttgct
cgtggaattgatattacaggtgttgactacgtaattaactatgatgtatcaatggaagac
gaacattttgttcatagaattggtagaacaggaagaaataatacaaaaggtgattcaatt
acttttgtacaaaatcaaaatgttttaagacaaataaaaggaatagaaaaaaactttaat
ttaattattgatgaaatgcaaatttctgaatatggtgaagtagacaagcaagaaggaaga
ggaaactcaaatagaagttcacgcggagatagaagagattcaggtcgtggagatagaaga
gattcaaatcgtggagacagaagagattcaggtcgcggagacagaagagattcaaatcgt
ggtcgtgatgacagaagaaatgctggacacaatgatagaaaagactttgctcatggcgaa
agaaaaagaacaagtgaaagactagatagcagaagtagcgcttgaacttcacaatcatga
gaagaaagaatgttatctttatcacctgaagaaaaagaatttgctaaaaaagctttatct
ctagttgatgattattcaagtaatggaaactcatctaataactctgaaaattcaggcaga
agaggttcaaatcgtgggcgtgatgacagaagaagttcaaaccgtggtcgtgatgacaga
agaagttcaggacgcgatgatagaagaagctcaggccgtggagacaaaagagattcaaat
cgtggagacagaaaaaataataattttgaaggaactagacattcttcatgagatgttaaa
acagattactcaaaacaagattcaggtcgttgagaaagagtaacaggaaaagacaaaaga
cctgcatcatttaatgataaaaaaggtggatctgattcaaaccgtggtggagacgaaaga
agaaatagaagaagttcaggtagaggtgaatgagttcactcaggtccgagagaaaataaa
ggttcaggaacacgtaacagaagaaattcttcatcaaatagttcatctaaaaaatcaaga
aataaatgataa
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