Mycoplasmopsis columbina: NCTC10178_00445
Help
Entry
NCTC10178_00445 CDS
T06777
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mcom
Mycoplasmopsis columbina
Pathway
mcom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10178_00445 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcom03400
]
NCTC10178_00445 (uvrB)
DNA repair and recombination proteins [BR:
mcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10178_00445 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10178_00445 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA
Kinesin
UB2H
DPPIV_rep
Motif
Other DBs
NCBI-ProteinID:
VEU77022
UniProt:
A0A449B8V7
LinkDB
All DBs
Position
1:544125..546113
Genome browser
AA seq
662 aa
AA seq
DB search
MNKYELVSKYQPAGDQPQAIAELIANIENGEKFQVLKGITGSGKTFTIANVIKHFNRPVL
VLSHNKTLASQLYSELKGFFPNNKVEYFVSYFDYYRPEYYHVASDSYSEKVSQTNAELDA
MRMSSVNSVLTRNDTIVVASVSAIYGALNPQEYKDNFWDIHVGMQISRQEFLRKLVILQY
QRNEVDQPLGSFSSKGDIVFIRPADDENYLIRIEFFGDEIDGIAIIHPTTKDILEKVKQR
TIFPAQAYTVSKDIIQEACQKIYHEMVERVKYFESNNKLLEAQRIEERTKKDIDSLDQFG
VCPGIENYALYMDRRNPGERPYTLLDYFKGKNPLVIIDESHMMLPQLAAMYRGDRARKET
LVEFGFRLPSALDNRPLRFEEFEECFDFQTIYISATPAQYELDKTYGVITPLYIRPTGLL
DPKIEVKPTKGQVEDIYDELQKQKTKGEKTLILTTTKRLAEELTRYFLQKNEKIAYIHSE
HKTFERNNILRKLRSGIYDTVIGINLLREGIDLPEVSLIIVLDADKEGFLRSTSSLIQIA
GRAARNANGRVIFYADKITKSMQETIEDNEYKRKIQIAYNEKHGIIPQTIQKPIPEPIQG
SDQLINDIQLFLNAKDKKEKTSLSKEEILAELRKQMNQASKELDYERAIELRDMIFDLEA
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatgaattagtttcgaaatatcaaccagcaggagatcaaccacaagctatt
gctgagttgattgcaaatatagaaaatggtgaaaaattccaagttttaaaaggaattact
gggtctggtaaaacttttacaattgctaatgttataaaacattttaatagaccggtttta
gttctttcgcacaataaaactttagcttcacaactttatagtgaactgaaaggttttttt
cctaataacaaagttgaatattttgtttcctacttcgattactatcgtcctgagtactat
catgttgctagcgattcatacagtgaaaaagtttcacaaactaatgcagaattagatgca
atgagaatgtcgtccgtcaattcagttttaacaagaaatgacactattgttgttgcttca
gtttcagctatttatggtgctttaaatcctcaagaatataaagacaatttttgagatatt
catgttggaatgcaaattagtagacaagaatttttgagaaaacttgttattttacaatat
caaagaaatgaagtagatcaacctttaggatcttttagttctaaaggagacattgttttt
attagaccggcggatgatgaaaattatttgattagaattgaattttttggagatgaaatt
gatggcattgcaatcattcatccaacaactaaagatattttagaaaaagttaaacaacga
acaatttttcctgctcaagcttatactgtttcaaaagatattattcaagaagcatgtcaa
aaaatttatcatgaaatggttgaaagagttaaatattttgaaagtaataacaaacttctt
gaagcacaaagaattgaagaaagaacaaaaaaagatattgactctttagatcaatttgga
gtttgtccaggaattgaaaattacgctttatatatggatagaagaaatccaggcgaaaga
ccttacaccttattagactattttaaaggtaaaaatccacttgtcattattgatgaatct
cacatgatgcttccacagttagctgcaatgtatcgtggagatagagcaagaaaagaaaca
ctcgtagaatttggttttaggttacctagtgctctagataatagaccattacgttttgaa
gaatttgaagaatgttttgattttcaaactatctatatttcagcaacaccagcacaatat
gaactagataaaacttatggagtaattacacctctttatattcgtcccactggtctttta
gatccaaaaattgaagttaaaccaactaaaggtcaagttgaagacatctatgatgaatta
caaaagcaaaaaacaaaaggcgaaaaaactttaattttaactaccacaaaacgtttagca
gaagaactaactcgttatttcttacaaaaaaatgaaaaaattgcctacattcattcagaa
cacaaaacatttgaaagaaataatattttaagaaaactaagaagcggtatttatgataca
gtcattggaattaacttgctaagagaaggtattgatttacccgaagtaagcttaattata
gtattagatgcagataaagaaggatttttaagatctacaagcagtttaattcaaattgct
ggacgggcagcaagaaatgcgaatggaagagtaattttttacgctgataaaattaccaaa
agtatgcaagaaacaattgaagacaacgaatacaaaagaaaaattcaaattgcttataat
gaaaaacacggaattattccgcaaacaattcaaaaaccaattcccgaaccaattcaggga
agtgatcaattaattaatgacattcaattatttttaaatgccaaggacaaaaaagaaaaa
acgtcactctcaaaagaagaaattttagctgaattaagaaaacaaatgaatcaggcttca
aaagaactagattatgaaagagcaattgaattaagagatatgatctttgatttagaagct
ggaaactag
DBGET
integrated database retrieval system
