Micromonospora craniellae: ID554_13265
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Entry
ID554_13265 CDS
T06957
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcra
Micromonospora craniellae
Pathway
mcra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ID554_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcra03400
]
ID554_13265
Enzymes [BR:
mcra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ID554_13265
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ID554_13265
DNA repair and recombination proteins [BR:
mcra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ID554_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
zf-RRN7
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QOC94448
LinkDB
All DBs
Position
2983876..2984736
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRQRAVGRRVDRLEVAAISALKTYDPAPTAVVGRTVTDARRHGKFLD
VVFDGGLHLVVHLARAGWLHYREAFASTVPLRPGKGPIALRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPQAVPGVAKLGPDAIAADLSTFAGALRSRRGQVKGVLTDQSVLAGVGNAYSD
EILHAAKLSPFALTDRLSDDQMAALHAATRRVLGDAVTRSLGQRAAELKGEKRSGLKVHA
RTGLPCPVCGDAVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactaccggaggtggaggcgctcgcaggctacctgcggcagcgcgcggtgggc
cggcgtgtcgaccggctggaggtcgccgcgatcagcgccctgaagacgtacgacccggca
ccgaccgcggtcgtcggccggacggtgaccgacgcccggcggcacggcaagttcctcgac
gtcgtcttcgacggtggcctgcacctggtggtccacctggcccgcgccggctggctgcac
taccgggaggcgttcgcttcgaccgtcccgctccgtcccggaaagggaccgatcgcgctc
cgggtacgcctcgacgacggttccggtttcgacctgaccgaggccggtacccagaagaaa
ctcgccgcttatctggtcaccgacccacaggcggtccccggggtggccaagctcggtccg
gacgcgatcgccgccgacctgagcaccttcgccggggcgttgcgcagccgccggggccag
gtcaagggggtgctcaccgaccagtccgtgctggccggggtgggcaacgcgtactcggac
gagatcctgcacgccgcgaagctgtcgccgttcgcgctgaccgaccggctcagcgacgac
cagatggccgcgctgcacgcggcgacccggcgggtgctcggcgacgcggtgacccgctcg
ctgggacagcgcgctgcggagctcaagggcgagaagcggtccgggctgaaggtgcacgcc
cgcaccggcctgccctgcccggtctgtggggacgccgtccgggaggtctcgttcgccgat
tcgagcctccagtactgcccgacctgccagaccggcggcaagccgctggctgaccgacgg
ttgtctcgacttgtacggtga
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