Mobiluncus curtisii: HMPREF0573_10969
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Entry
HMPREF0573_10969 CDS
T01257
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcu
Mobiluncus curtisii
Pathway
mcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0573_10969 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcu03021
]
HMPREF0573_10969 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcu03400
]
HMPREF0573_10969 (rpoC)
Enzymes [BR:
mcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0573_10969 (rpoC)
Transcription machinery [BR:
mcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0573_10969 (rpoC)
DNA repair and recombination proteins [BR:
mcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0573_10969 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADI67288
UniProt:
D6ZKN9
LinkDB
All DBs
Position
1124735..1128628
Genome browser
AA seq
1297 aa
AA seq
DB search
MLDANKFDKLHIGLATEDDINSWSHGEVKKPETINYRTLKPEKEGLFDERIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVTRSKVRRERMGHIKLAAPVTHIWYFKGVPSRLGYLLNI
APKDLEKVIYFAAYMITDVDEERRHKDLADMQKESDLAREQIEKNRDLDIEKRAQKMEQD
MAALEKEGAEKSEIDKVKRNGEKEMRALRHQAESDLKLHDEVWDRFKSLKVGDLEGNELV
YREMYALYGTYFKGGMGAQAVKDRLESFDLEAEAEALKEVVESKTGQQKTRALKRLKVIN
AFLQTGKPASAMVLDSIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLNRLQEL
KAPDIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKTMALELFKPFVMKVLVENGEAKNVKAAKRMVERQN
AQVWDVLDEVITNHPVLLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHVPLSAEAQAEARVLMLSSNNILKPSDGRPVTMPSQDMIIGIYHLTSEEDPEMVHAP
RFDPDGNRVLKYYTSPAEARLAYDNGDLALQETCVIRMEPGDLPPEDMEMPEGWQPGERF
ELKTSLGRVIFNDSLPRDYPFVNYVVEKKKLGKIVNDLAELYKKADIEVSLDALKSFGFH
WSTWSGITISFTDVVPPSTKPAILEKYENLASDVQADYDLGAITEDERYSALIDLWRACT
NEVAEEMRENFPERNNVYRMVKSGARGNWSQIQQIAGMRGLVSDPKQRLIERPIKSNYRE
GLSVLEYFIATHGARKGLADTALRTAESGYLTRRLVDVSQDVIIREEDCGTRKGLNITIG
FVNEDGQIEPDELVETTAFARTLAVDAVDEAGNVVLEAGQDVGDVAIKKLLKAGITQIKV
RSVLTCDAPVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAAS
AADITQGLPRVQELFEARTPKGEATITEAAGRVKINDDPSGPREVIITRDDGKEDLVIEV
SRRQALLVSDGDHLEVGDRLTQGPIDPKKLLRVKGQAETQRSLVNEVQQVYHSQGVDIHA
KHIEVIVRQMLRRVTVLESGDTMLLPGQLIDQAKFREENKRVVTQGKQPASARSELMGIT
KASLATDSWLSAASFQETTKVLTNAAMEGIDDPLSGLKENVILGKLIPAGTGLSRYRRVE
IKPSAGGHEVLMSQLPYSDTTGFGLFDDDVDLEHPWG
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgcaaacaagtttgacaagttgcacatcggtctggcgaccgaggacgacatt
aacagctggtcccacggcgaagtcaagaagccggaaaccatcaactaccggacgctgaag
cctgagaaagaaggcttgttcgacgaacgaatcttcggaccgacccgtgactgggaatgt
gcctgcgggaagtacaagcgcgtccgctacaagggtattgtctgcgaacgctgcggggtg
gaagtcacccgttccaaggtgcgtcgcgagcggatgggtcacattaaactcgctgctccc
gtcacgcatatttggtacttcaagggcgtgccttctcggcttggttacctgctgaatatc
gctccgaaagacctggaaaaggtcatctacttcgcggcgtacatgattaccgacgttgac
gaggaacgccgccacaaggaccttgccgatatgcaaaaggaatccgacctggctcgtgaa
caaatcgaaaagaaccgtgacctggacatcgaaaagcgtgcccaaaagatggaacaggat
atggcggcgctggaaaaggaaggcgccgagaaatccgaaatcgacaaggtcaagcgcaac
ggtgaaaaggaaatgcgcgcgctgcgccaccaggctgagtctgacttgaaactgcatgac
gaagtttgggaccggtttaagagcctgaaggtcggcgacctggagggtaacgagctggtc
tatcgcgaaatgtacgccctgtacggcacctatttcaagggcggtatgggcgcgcaggcg
gtaaaggatcgcttggagtctttcgacctggaagcggaagccgaagcgctgaaagaggtc
gtggagagcaagactggccaacagaaaactcgcgccctgaagcgcctgaaagtcattaat
gcgttcctccagaccggcaagccggcgtcggcgatggtgctggattcaattccggtcatt
cccccggacctgcgccccatggtgcagctggacggtggacgcttcgcgacttctgaccta
aatgatctgtaccgccgcgtcatcaaccgcaacaaccgtttgaatcgtttgcaggaattg
aaggccccggacatcatcgtcaacaacgagaagcggatgttgcaagaggccgtggacgcc
ctgtttgacaacggtcggcgtggacgtccggtgaccggaccgggtaaccgtccgttgaag
tccctgtccgatatgctcaagggtaagcaggggcggttccgtcagaacctgctgggtaag
cgcgtggactattccggacgttccgttatcgtggttggtccgcagttgaagttgcaccag
tgtggcttgcccaagacgatggctctggagctgttcaagcctttcgtgatgaaagtcttg
gtggaaaacggcgaagccaagaacgtgaaggctgccaagcggatggtggagcggcaaaac
gcccaggtttgggacgttttggacgaggttattaccaaccacccggtgctgttgaaccgt
gctcctaccctgcaccgtttgggtatccaggccttcgagccgctgctggtggaaggtaag
gctattcagctgcacccgctggtctgtggcgcgttcaacgcggactttgacggcgaccaa
atggcagttcacgttccgctatcggcagaagcccaggctgaggcgcgcgtgctgatgctg
tcgtcgaacaacatcttgaagccttcggacggtcgtccggtgaccatgccctcccaggac
atgattatcggtatttaccacctgacctcggaagaagatccggaaatggttcatgctccg
cggtttgaccccgacggcaaccgggtgctgaagtactacacaagccctgccgaagcccgc
ctggcttatgacaatggcgacctggctttgcaggaaacctgcgtgatccgcatggaaccg
ggcgacttgcctccggaggatatggaaatgccggagggctggcagccgggagaacgcttc
gagctgaagacctccctggggcgcgtcatctttaatgactcgctgccgcgcgattacccg
ttcgtcaactacgtggtagagaaaaagaaactcggcaaaatcgtcaacgatttggcggag
ctgtataaaaaggccgatattgaggtgtccctggatgccctcaagtccttcggtttccac
tggtcgacctggtccggaatcacgatttccttcacggacgtggtgccgccttcgaccaag
cccgccattttggaaaagtacgaaaacctcgcttctgatgtccaagccgactacgacctg
ggtgccatcaccgaggacgaacgctacagcgccttgattgacctgtggcgagcctgcacg
aatgaagtggcagaggaaatgcgcgagaacttccccgaacgcaacaatgtgtaccgcatg
gtgaagtccggggctcgtggtaactggtctcagattcaacagattgccggtatgcgcggt
ctggtgtccgacccgaagcagcgcctgattgagcgcccgattaagtcgaactaccgcgaa
ggtctgtccgtgttggagtacttcatcgcgacccacggtgcgcgtaagggtctggcggat
acggctttgcgtactgccgaatccgggtacctgacccgtcgtctggtggacgtgtctcag
gacgtcatcatccgtgaggaagactgcgggactcgcaagggcttgaacattaccatcggt
ttcgtcaacgaggatggtcagattgaacccgacgagctggtcgagaccaccgcttttgcg
cggactttggcagttgacgcggtagacgaagctggaaacgtcgtgctggaagccgggcag
gatgtcggtgacgtggcgattaagaagctgctcaaggccggcatcacccagattaaggta
cgttctgtgctgacttgtgacgcaccggtggggacctgcgcggcttgctacgggcggtct
ctggctaccggcaagcgcgtggacattggcgaggccgtcggtattattgccgcgcagtcc
attggtgagcccggtacgcagctgacgatgcgtaccttccacaccggtggtgcggcttcg
gctgccgatattacccagggtctgccgcgtgtgcaggagctgtttgaagcgcggaccccc
aagggtgaagccaccatcaccgaggcagccggtcgggtaaagataaacgacgacccgtcc
ggtccgcgtgaggtcatcatcactcgtgacgacggcaaggaagacctggtcatcgaggtg
tctcgccgccaggcactgctggtctccgacggcgatcacctggaggtgggcgaccgcctg
acccagggtcccatcgacccgaagaagctgctgcgcgtgaaaggccaagctgaaacccag
cgttccctggtcaacgaagtacagcaggtctaccacagccagggcgtagacattcacgcc
aagcacatcgaggtcatcgtgcgacagatgctgcgccgcgtgaccgtgctggaatccggc
gacaccatgctgctgcccggtcagctcatcgaccaggcgaagttccgcgaggaaaacaag
cgggtcgtgacacagggcaaacagccggcttcggcgcgttccgaactgatgggtatcacc
aaggcgtccttggctaccgattcctggctgtccgcggcttctttccaggaaaccacgaag
gttctgaccaacgcggcaatggaaggcatcgacgatccgctgtcgggtctgaaggaaaac
gtcatcctgggcaagctgattccggctggtaccggtctgagccgttaccgtcgcgtggaa
atcaagccttccgcgggcggtcacgaagtgttgatgtcgcagttgccttacagcgacacg
accggattcggactgttcgatgacgatgtcgacctggaacacccgtggggatag
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