Methanobacterium congolense: MCBB_0472
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Entry
MCBB_0472 CDS
T04503
Symbol
rrp41
Name
(GenBank) Exosome complex component Rrp41 {ECO:0000255|HAMAP-Rule:MF_00591}
KO
K11600
exosome complex component RRP41
Organism
mcub
Methanobacterium congolense
Pathway
mcub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCBB_0472 (rrp41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcub03019
]
MCBB_0472 (rrp41)
Messenger RNA biogenesis [BR:
mcub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MCBB_0472 (rrp41)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MCBB_0472 (rrp41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
SCG85048
UniProt:
A0A1D3L0H4
LinkDB
All DBs
Position
I:482348..483064
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AA seq
238 aa
AA seq
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MADSNLSTGTETSARADGRAFDELRPFKIEAGVLERADGSAYLEIGGNKVLVAVYGPREL
HIRRLMQPNKAVLRCKYNMAPFSVDDRKRPGPDRRSVEISKITSEALTPAVFLEKFPRST
IDVFIEVIEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKSNGQVVLDLSELEDKE
GEADLPVAMMPRTGDITLLQMDGHLTGDEFEKAIDLAMDGCKKLGEAQKQAIINRYGD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagtaatttaagcacaggtacagaaaccagtgcaagggctgatggaagagct
tttgatgaattaagaccattcaaaatagaagcaggagtacttgaaagggctgatggttca
gcttaccttgaaattggaggtaacaaagtccttgtggctgtatatgggccaagagaactc
cacataaggagattgatgcagccaaacaaggcggttttaaggtgtaaatacaacatggct
cccttttcagtggacgaccgtaaaagacccggaccagatcgcagatcagttgagatatca
aagataacctctgaagcactaacacctgcagtttttcttgagaagtttccaagatcaacc
atagatgtcttcatcgaggtgatagaggctgaaggaggaacaagatgtgctggtataact
gctgcgtcagttgcacttgcagatgcaggtatacccatgagggacatggttgtggcatgt
gcagctggaaaatccaatggtcaggttgtattggatctttcagagcttgaggataaagaa
ggtgaggcagaccttccagtagctatgatgccaagaaccggtgatattacacttcttcag
atggatggccatctcacaggtgatgaatttgaaaaggccattgatcttgcaatggatgga
tgcaaaaaattaggtgaggcacagaagcaggccataataaacaggtatggtgattaa
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