Musca domestica (house fly): 101895061
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Entry
101895061 CDS
T03448
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mde
Musca domestica (house fly)
Pathway
mde03022
Basal transcription factors
mde03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101895061
09124 Replication and repair
03420 Nucleotide excision repair
101895061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mde03021
]
101895061
03400 DNA repair and recombination proteins [BR:
mde03400
]
101895061
Transcription machinery [BR:
mde03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101895061
DNA repair and recombination proteins [BR:
mde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101895061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
101895061
NCBI-ProteinID:
XP_005176744
UniProt:
A0A1I8MA08
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MTDYKASSSSSKHGSVSSSMPSSLLVAKPANLQCKDFQEYLRTRSPDTLEKLYNYPTICL
AVYRELPEIARQFVIRILFVEQPVPQAVVASWGSQYYAKEQASSTNILTELNVWRTTTIP
GGLSAWELCPTFKKNLKIALLGGGKPWSMSHTLEKDSKPRDIAFLDQYAMSRWRCVLHYM
VGTGGANKGQGSEVISPDAVRILLHANLMKRDETGITITRQGFQFLLLDTQSQVWHFMLM
YLDTCEERGLSLPECLSMLFQLSFSTLGRDYSSEGMNPKMLAFLQHLREFGLVFQRKRKE
GRFYPTRLALNVTNKAATVPAVVLEDEKSQESGYIVVETNYRVYAYTDSPLQVAVLGLFT
ELLYRFPNLVVGVLTRDSVRQALRGGITADQIISYLEQYSHPNMKLTESAIKSKSPLPPT
VVDQIKLWELERNRFTYTEGVVYNQFLSQADFITLRDYAQSINVLVWQNERTRTMVVTKN
GHDDVKRFWKKFSKNAS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattacaaggcatcctcctcatcgtcgaaacacggttcagtatcttcatcaatg
ccaagttcattgttggtagcaaaaccggcaaatttacaatgcaaagatttccaggaatac
ctgcgaactcgaagtcccgatacattggaaaagctttataattatcccacaatttgtttg
gctgtctatcgggagctgccggaaattgccaggcaatttgtaatacgtatattgtttgtg
gagcaaccggtaccacaggccgttgttgcctcatggggttcacagtattatgccaaagaa
caggcttcgtccacaaatattttgacagaattgaatgtttggcgcaccaccacaataccg
ggaggtttgtcggcctgggagctgtgtcccacctttaagaagaatttaaaaatagcttta
ctgggtggtggtaaaccctggtctatgtctcatacattggaaaaggattccaagccacga
gatatagcctttttggatcaatatgccatgtcaagatggcgttgtgtattgcattatatg
gtgggcacgggtggtgccaacaagggtcaaggcagcgaggtgataagccctgatgctgtg
agaattctcctgcatgccaatctaatgaaacgtgatgagactggtataaccataacgcgg
cagggtttccaatttcttttgttggacacccaatcccaggtttggcactttatgctcatg
tatttggatacatgtgaggaacgtggtttatctttgcccgaatgcctgagtatgttgttc
caattgagtttttccacattgggtcgtgactatagttcggagggtatgaatcccaaaatg
ttggcatttctacagcacttgcgtgagtttggtttggtatttcaacgtaaacgtaaagag
ggaagattttatcccacccgtttggctttgaatgtcaccaataaggcagccaccgtgccg
gctgtggttttggaagatgaaaaatcccaggaaagtggttacattgttgtggaaaccaat
tatcgtgtatatgcctacacggattctccgctgcaggtggcagttttgggtttattcacc
gagttgctgtatcgtttccccaacttagtggttggtgtgctgacccgtgattcggtgcgc
caggctctacgtggtggcataacagcagatcaaataatcagctatttggaacaatattcc
catccgaatatgaagttaaccgaatcggctatcaaatcaaaatctccactgccacccaca
gttgtggatcaaattaagctatgggaattggaaagaaatcgtttcacctataccgaggga
gtggtgtacaatcaatttctgtcacaggctgattttataacgctgcgagactatgcccag
tccattaatgtgctggtatggcagaatgaacgcacacgcaccatggtggtgacgaaaaat
ggccacgatgatgtcaaacgattttggaagaaattctccaaaaatgccagttga
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