Methylorubrum extorquens DM4: METDI3174
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Entry
METDI3174 CDS
T00947
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00521
Streptomycin biosynthesis
mdi00523
Polyketide sugar unit biosynthesis
mdi00541
O-Antigen nucleotide sugar biosynthesis
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01250
Biosynthesis of nucleotide sugars
Module
mdi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
METDI3174 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
METDI3174 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
METDI3174 (rfbC)
Enzymes [BR:
mdi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
METDI3174 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAX24826
UniProt:
C7CM50
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All DBs
Position
3091731..3092282
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AA seq
183 aa
AA seq
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MQVIDTEIPAVKRVIPKRHGDDRGWFSEIYRADILSEHGIANAFVQDNQSFSAPAGTIRG
LHFQVAPNAQAKLIRVLAGAILDVAVDLRSGSPSYGRHVAVRLDATGGEQLFVPAGFAHG
FCTLEPDTMVAYKVDAYYSPADDRNLRWNDPAIGIAWPVAEADAILSGKDKAAPLLADLG
RVF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcatcgatactgagattccggcggtcaaacgggtgatcccgaagcgccacggc
gacgaccgcggctggttctccgagatctaccgggccgatatcctgtccgagcacgggatc
gccaatgccttcgtgcaagacaaccaatccttctccgcgcccgccggcacgatccggggt
ctgcacttccaggtggcgcccaacgcccaggccaagctgatccgggtgctcgccggcgcg
atcctcgatgtcgccgtcgatctgcgctccggctccccgagctacggccgccacgtcgcc
gtgcggctcgatgcgaccggcggcgagcagcttttcgtgcccgccggctttgcccatggc
ttctgcaccctggagccggacaccatggtcgcctacaaggtcgacgcctattacagcccg
gccgacgaccggaacctgcgctggaacgatccggcgatcggcatcgcgtggccggtggct
gaagcggatgcgatcctctcgggcaaggacaaggctgcgccgcttctggccgatctcggg
cgggtgttctga
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