Methylorubrum extorquens DM4: METDI5242
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Entry
METDI5242 CDS
T00947
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00860
Porphyrin metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01120
Microbial metabolism in diverse environments
mdi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
METDI5242 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdi04147
]
METDI5242 (hemB)
Enzymes [BR:
mdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
METDI5242 (hemB)
Exosome [BR:
mdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
METDI5242 (hemB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CAX26855
UniProt:
C7CLK6
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All DBs
Position
5168985..5170040
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AA seq
351 aa
AA seq
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MSDATPRPLAIETAREAAPGAGPLSLTQRPRRNRKADWSRRLVREHSLTVDDLIWPLFVI
EGEKRREPIASMPGVERLSVDEIVREAERAARLGIPAISFFPYTEPSLRDPTGSEALNRE
NLVCRAVRAVKRAVPEIGVMTDVALDPYTSHGHDGLIEAGAILNDETVAVLVEQSLIQAE
AGTDIIAPSDMMDGRVGAIRTGLDRAGFRDVQIMAYAAKYASAFYGPFRDAIGTSAALVG
DKRTYQMDPGNAAEALREVALDLAEGADSVMVKPGLPYLDIITRVKTEFGVPTFAYQVSG
EYAMIEAAARNGWLDGDRAMTESLLAFKRAGADGVLTYYAPRVAERLRAGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccaccccgcgcccgctcgccatcgagaccgcgcgcgaagccgcccccggt
gcggggccgctgagcctgacccagcgcccgcgccgcaaccgcaaggcggattggtcgcgc
cgcctcgtgcgcgagcatagcctcaccgtcgatgacctgatctggccgctcttcgtgatc
gagggcgagaagcgccgcgagccgatcgcctccatgcccggcgtcgagcgcctgagcgtg
gacgagatcgtgcgcgaggccgagcgcgccgcgcggctcggcatcccggcgatctcgttc
ttcccctacaccgagccgtccctgcgcgatccgaccggctccgaggcgctgaaccgcgaa
aacctcgtctgccgggcggtgcgggcggtgaagcgggccgtccccgagatcggcgtgatg
accgatgtcgcgctcgacccctataccagccacggccatgacggcttgatcgaagccggc
gccatcctcaacgacgagaccgtcgcggtgctggtcgagcagagcctgatccaggccgag
gccggcaccgacatcatcgccccctccgacatgatggacgggcgcgtcggcgcgatccgt
accggtctcgaccgggccggctttcgcgatgttcagatcatggcctacgccgcgaaatac
gccagcgcgttctacgggccgttccgcgacgccatcggcaccagcgcggcgctggtcggc
gacaagcgcacctaccagatggatcccggcaacgcggccgaggccctgcgcgaggtggct
ctcgacctcgccgagggcgccgactcggtgatggtcaagcccggcctgccctatctcgac
atcatcacccgcgtgaagacggagttcggcgtgccgaccttcgcctatcaggtgtcgggc
gagtacgcgatgatcgaggctgccgcccgcaacggctggctcgacggcgaccgcgccatg
acggagagcctgctcgccttcaagcgcgcgggcgccgacggggtgctgacctactacgcc
ccccgcgtcgccgagcgcctgcgcgcgggcgcctaa
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