Microplitis demolitor: 103577648
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Entry
103577648 CDS
T05600
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mdl
Microplitis demolitor
Pathway
mdl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103577648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdl03400
]
103577648
Enzymes [BR:
mdl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103577648
DNA repair and recombination proteins [BR:
mdl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103577648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
PilZN3
Motif
Other DBs
NCBI-GeneID:
103577648
NCBI-ProteinID:
XP_008556611
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
IGKKLKDENPDADISLFPIMRLLLINKDHERGPYGLKEKSLGNLYVRIFCLGNSDDAKKI
INYRIPTEQKAQTNDFAEKVYWILKRRLRNACNLSIEQINFVLDKIAENNRQNKSKDSEF
IYLVQQCGALEVKWLTRIILKSIRIGLGEKQILNAYHEDAESLFGEQSNLREVCDVLHNL
KYRIKKSSNISVLSPFKPMLLERLTLDRLSELFVHCPEYVVQTKFDGERSQLHMINNKYK
YYTRHGYDVTNHSSYGESPASGHLTSKISALLSPSCSSIILDGELMGWHKEKSCFGSKAM
SFDVKKLTFKSVFQPCLMVFDIILYNDQLVVNLPLKERLKIIETAFTPKDGVLMRSKNTF
VTRVEEILEIFNHSLDNADEGIVIKDSSGVYKPNSREGNKCYKLKAEYSSNLVEDIDLLI
VGGYYGQGKHSGMYSSFLVALVVPGVDEASQIFKSVVSVSTGITGDKLKELNNRFADHWT
SERPANVVGPKKDPPDSWLPPEKSLVLQIRATELIRCDTQPTGYTLRFPRVKLIRDDKPW
YDACTITEFKSLIKNWGSVNKLTKRHANEEDLKSLGSSKRRETESKFIKPVRMDEKHFGV
RAADVERQTRLMEGKEFCVINGELDNHADDVVLTKENIEIILLQHSAKVVQNPGKNTFCV
IVGNSETMKAVNLINSGKYDIVKTCWLKRATVEENWGNLVDWFPWEMLAMRKETKERLGK
DYDIYWDSYYMDADDESLKRSLDRVDKFAEEKVFEKEDYEDLDKEFCNLEVRLFERVVGH
FVDDDWLKSPFLFMKGTISENVDEFTTHVFVGDVFDRINIYKKINDSGKTFIKLLNRMWV
KDCFDRGCLLPEIDYIVQ
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
ataggaaaaaaattaaaagatgaaaatcctgatgctgacatttcattatttccaataatg
agattattattaataaataaagatcatgaacgaggaccgtatggtttaaaagaaaaatct
ttaggaaatttgtatgttagaattttttgtctaggtaattctgatgatgcaaaaaaaatt
attaactacagaataccaacggaacaaaaagcacaaactaatgattttgctgaaaaggtt
tactggatattgaaacgcaggcttaggaatgcctgcaacttatcaattgaacagatcaat
tttgtactagacaaaatagctgaaaataatagacagaataagagcaaagatagcgaattt
atatacttggtacagcaatgtggtgctttggaagttaaatggttgacgaggatcatattg
aagagtatcagaatcgggctcggtgaaaaacaaattctcaatgcgtaccacgaggacgca
gaatcattatttggtgagcaatcaaacttgcgcgaagtctgtgatgttcttcacaaccta
aaatatcggattaaaaaaagttcaaacatatcagttctttcgccttttaagcccatgctt
ctcgagcgcctcactctcgacagactttctgagctctttgtccattgccccgagtacgtg
gtccaaacaaagtttgacggtgagcgcagccagctacacatgatcaacaacaagtacaag
tactacacgcgccatggttatgacgtaaccaaccactcgagctatggtgagtctcccgct
tctggtcatctaacctctaaaatatctgccctcttaagcccgtcatgcagctcaataatc
ctcgatggcgagctcatgggctggcacaaagaaaaatcttgtttcggatcaaaagccatg
tcctttgatgttaaaaaattgactttcaaaagtgtcttccagccttgtttgatggtcttc
gatataattctatacaatgaccaacttgttgtgaacttgcctttaaaagagcgcctgaaa
attatagaaaccgctttcactcccaaagatggcgttctgatgcgcagtaaaaatactttc
gtaacccgcgtagaagaaattcttgaaattttcaaccatagcctagacaacgctgacgaa
ggaattgtcataaaagattcttcaggagtttacaaaccaaattcacgtgaagggaacaaa
tgttacaaactaaaagccgagtattcaagtaatttagtagaggacattgatcttctgata
gttggaggttattacggccaaggaaaacattctggaatgtacagcagcttcttagtagcg
ctggtagttcctggagtcgatgaagcctcgcagatttttaaatcagtcgtcagtgtcagc
accgggattactggagacaaattgaaggaactgaacaaccgattcgcggatcactggacc
tccgaacggcccgctaatgtcgttggcccgaaaaaagatccaccggactcctggttaccg
ccagaaaaatcactggtgctgcagatcagggctactgagctcattagatgcgacacccag
cctactggctacaccttgaggtttcccagagttaaattaattcgtgatgacaaaccctgg
tacgacgcatgcacgatcacggaattcaagagcttgattaagaattgggggtcggttaat
aagttaactaaacggcatgccaatgaagaagatttaaaatctttgggaagttccaagcgc
agggaaacggaaagtaaatttattaagcctgtgagaatggacgagaaacattttggggtc
agagctgctgacgttgaacgtcagacccgattaatggagggtaaagagttctgtgtgatt
aatggagagcttgataatcatgcagatgacgttgttttaactaaagaaaatattgaaatt
attttactacagcattcggcgaaagttgttcagaatccgggaaaaaatactttctgcgta
atcgtaggaaattcagaaacaatgaaagccgttaatttaattaattcaggtaagtatgat
attgtgaaaacatgctggttaaaaagagcgacggttgaagaaaattggggtaacttggtt
gattggtttccttgggaaatgctggcgatgcgcaaagaaactaaggaacgattagggaaa
gattatgatatttattgggacagttattatatggacgctgatgatgaaagtttgaaaaga
tctttagatagagttgataaatttgctgaagaaaaagtattcgagaaagaagactacgag
gatttggataaagagttttgtaatttggaggttagactctttgagcgcgtggtcggccat
tttgttgacgatgactggcttaaaagcccttttttgtttatgaaaggaacaattagtgag
aatgttgatgagtttactactcatgtttttgtgggagacgtttttgatagaattaatatt
tataaaaaaataaatgactcaggtaaaacttttattaaacttctcaacaggatgtgggtc
aaagattgttttgatagaggatgtttgttaccagaaatagattatattgttcaataa
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