Malus domestica (apple): 103405032
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Entry
103405032 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103405032
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103405032
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
HJURP_C
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
103405032
NCBI-ProteinID:
XP_008342227
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Position
17:complement(9623975..9625712)
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AA seq
400 aa
AA seq
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MGSKFVLRATFFLFLVALFIKAKAADIDIKKFGAKADGKTDDSQAINSAWKEACTSATPS
TVVIAKGNYMVGPVKFQGPCKAPVSLRVEGTLQAPAEPEKLKSQDGWVIFQNIDALSVSG
GGTFDGQGSIAWSKNDCAXTGKCNSLPISLRLTGLTNAHIQDITSTNSKLFHMNILNCKN
VTLQHVTINAPGESLNTDGIHIGRSTNINITGAEIQTGDDCVSIGDGSQQINIEKVTCGP
GHGISIGSLGRYHDEQPVRGVTVRNCTIKNTSNGVRVKTWPASPNGVASDLHFEDIIMEN
VTTSPVLIDQEYCPNGQCQAKMPSRVKISNVSFKNIRGTSADPVAVKLACSKGIPCQNVE
ISDINLTCNGKNGTCTSVCSNVNPTVTGKVIPPACSAKTS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaagtttgttcttagagctacattctttttgttcttggtagcactcttcata
aaagccaaggctgcagatattgatatcaagaagtttggagccaaggctgatggaaagaca
gatgacagccaggctattaatagtgcttggaaagaagcctgtacatctgctacgccaagc
acggttgtgatagcaaagggaaactacatggttggtccagtgaagtttcaaggaccctgc
aaagcaccggttagccttcgggttgaaggaaccctacaggctccggcagaacccgaaaag
ctcaagtcacaagatgggtgggttattttccaaaacattgatgcgttatcagtctcagga
ggtggcacttttgatggccaaggttcaattgcttggtccaaaaatgattgtgccnaaact
ggcaaatgcaactcgcttcctattagtttaagattaactgggctgaccaatgcacacatt
caagacataacatctacgaacagcaagttgttccacatgaatatcttgaactgcaaaaac
gtgactcttcaacatgtgaccatcaacgcccctggcgaaagcctaaataccgacggaatc
cacattggtaggtcaacgaacatcaacatcaccggcgcagaaattcaaaccggtgatgat
tgtgtctccattggtgatggaagccagcaaattaacatcgagaaggtgacgtgcgggcca
ggccacggcattagcattggtagcctaggcaggtaccacgatgagcaacctgtaagaggg
gtcacagtgagaaattgcaccataaaaaacacttccaatggtgttagggttaagacatgg
cctgcttcacctaatggtgtggcctcggatttgcatttcgaggacataattatggaaaac
gtgactacttccccggtccttatagaccaagaatactgcccgaatggccaatgccaagcg
aaaatgccgtcgcgggttaaaatcagcaatgtgagcttcaagaacattaggggcacctct
gctgatcctgttgctgtcaagcttgcttgcagcaaaggcattccatgtcagaatgtggaa
attagtgacattaatttgacatgcaatgggaaaaatggcacctgtacatcggtatgttct
aatgtgaaccctactgtgactggcaaagttattccacctgcttgttctgcaaagacttct
taa
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