Malus domestica (apple): 103406181
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Entry
103406181 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103406181
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103406181
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103406181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
zf-RING_16
BORCS6
zf-UDP
RINGv
PHD
zf-C3HC4_3
zf-RING_15
Motif
Other DBs
NCBI-GeneID:
103406181
NCBI-ProteinID:
XP_008343411
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All DBs
Position
1:complement(17572982..17576815)
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AA seq
572 aa
AA seq
DB search
MANADSHNFTKTICSICYEDLKPTSEDLQSISICGHVFHELCLQQWFEYSARTKKYTCPV
CKQNCKQKDAGRLYFQSVGDAADATQRPISKCEEDPQVLRREVKRLEVAELGIRLAFDLQ
GKELKELKEELCQCKEVAQKEVVLKNEALKQQAYMQLQLTMKTEALDKSTMERLRLQERN
MALAKELAAFKLVSDLDLDEDEVSKLSTLGNGANTKDTIDILRKSLEMSKRNYKELINKY
NGLAREARESKKLEQEAKEKIKKMKTRVQEMETVVEVKDNEVLRALKASKTTRGEGIMQN
GERCTTNSVSVNNSSEVQRKHPYAPIRKLDRIEKWENDLLCHRKTENSNFTDDMDLSCTK
DGTSTTVHDKVRDAYSLGDKGASKLSTAKRGLSNPKLKEPTYEDVVNQKCTRLRSDAVSD
TRKETPTCNNTARTPAADVVILDDVEQDQPMFNIRKESPVPQPLPGTGDVCFSGGLLGPD
GTNRFLGKWCKRGLNKGSESRQNPSADSGNLIAVGADGRGGRIKVLRSLNHSTVDNKENA
PATKRFKSGSKANSVQSQGCLQIEHFFGRVGR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcagattcccacaattttaccaaaacaatctgctcaatctgctacgaagac
ctcaagcccacttctgaggatctccaatccatctccatctgcggccatgtcttccacgag
ctctgtctgcaacagtggttcgagtactctgcgaggacgaagaagtacacttgcccggtg
tgcaaacaaaattgcaagcaaaaggatgccggccggctttattttcagtcggtgggggac
gcggcggatgcgactcagaggccgattagcaaatgcgaggaagatccccaggtgttgcgt
cgagaggtgaaaaggttggaggtggcggagctgggaattcgtttggctttcgatcttcag
gggaaggagcttaaggagctcaaagaggagctttgtcaatgtaaggaggtggcacagaaa
gaagttgtcttgaaaaatgaagccttgaaacaacaagcatacatgcagctacagcttacg
atgaaaactgaggctcttgataaatcgaccatggagcgtttgaggttgcaagaaagaaac
atggcattggccaaagagcttgcagcattcaaactggtatctgatctagatctggatgaa
gatgaggtttcaaagctttccactcttggtaatggtgccaacaccaaagacacgatagat
attcttagaaagtccttggagatgagtaaaaggaattacaaagaattgataaacaaatac
aatggtcttgcacgagaagctcgtgagagcaaaaaactggagcaggaggctaaagaaaag
attaaaaaaatgaagacaagggtacaagaaatggagacggttgtcgaagtaaaagataat
gaagttttgagggctttaaaagcttcaaagacaactcggggtgaaggaattatgcagaat
ggtgaaagatgtaccactaattcagtgtctgtcaacaattcatcagaagttcaaagaaaa
catccgtatgcacccattcgtaagttggatagaattgaaaaatgggaaaatgatttactg
tgtcataggaaaacagaaaactcaaacttcactgacgatatggatttaagctgtactaaa
gatggtacaagcaccactgttcatgataaagtaagagatgcctactctttaggagataaa
ggtgcttcaaaactttctacagctaagcgtggactttcaaatcccaaattgaaagaacca
acctatgaggatgttgttaaccagaagtgcactcggttgaggtcagatgcagtttctgat
actaggaaagaaactcctacttgtaacaatactgccaggactcctgctgccgatgttgtg
attcttgatgatgttgaacaagatcaacccatgtttaacattagaaaggagtctcctgtc
ccacaaccacttcccggaacaggggatgtatgtttttctggtggcttgcttgggcctgat
ggaacaaacaggtttttaggtaaatggtgcaagcggggtctgaacaagggatcagaatca
agacaaaacccaagtgcggattctggtaatttgattgctgtaggagctgacggaagaggt
ggaagaatcaaagttcttagatcactgaatcattcaacagtggataataaggagaatgca
ccggcgacaaagcgcttcaagtcggggtctaaagcaaatagtgtgcagtcccaagggtgc
ttgcaaatagaacacttctttgggagggttggtagatga
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