Malus domestica (apple): 103420478
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Entry
103420478 CDS
T03194
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103420478
03015 mRNA surveillance pathway
103420478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103420478
03041 Spliceosome [BR:
mdm03041
]
103420478
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103420478
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103420478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
103420478
NCBI-ProteinID:
XP_008356765
LinkDB
All DBs
Position
3:complement(7056284..7061961)
Genome browser
AA seq
830 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMSKVSMDVMRPWIANRATELL
GFEDEVLINFIYGLLEGKVNGKEIQISLTGFMEKNTVKFMKELWTLLISAQNNASGVPQQ
FLDAKQEEARKKKEEADRFANEIQKKKEKERIDQQEMLKMEGGAGKKANNAALEPNTKHM
SPRDSNDRYEDERGAEKRNGVKARNKVSRSPNSENSSLSPRERHRSRSISKSPKASRRSI
SSESDRSPPRRPITTVRRHSPEGSISPRRRSPYSRQRSRSNSQQRSPSPYRRRVRSPYWR
RPSLVRHRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVR
RRRSPSPVRRPRSPSPVRRRRSPSPLRRCRSRSPVRRRSPSPVRRSYRRSPLNTRDRYVS
PLQHRSPVRSRRSPTPPHRSPSPHDQSSSPIQHDSPSPIRRTSKLQRSPSQSPQERTRSL
EKTSSVPHRSSSHGSLQRELKNGNDSRKRETDFLPSPERSRILSESPPGVRSSSEERRRS
LSSPDESPVRRPREQMTRNVSSSPPRKLREQQLRRGSPDTSEDKPKVSPAKVRNKEEYSK
NRLGNKDSRNKEQEMKSGKSSGRGVPESPDQQQSPTIYKDSLHGETQNPDDGRKSDEKNR
SHSKNSKDSDRHRKPGSVHSSVEKVDHGNRSGTVESGSEESEKRRGGDKGKRKNKRSERQ
EVTSEDDYSNDSEIDERKDAKRRRKEEKRSRKEKKRRRREERRHRKEERRAEKLKGKNYS
GASASDCEHVGRRELHSSDNEETEAIQKKLEIELRKKALESLKAKKGISH
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgggttcttcaggggtacgtccgccgatcaggacactaggttttccaataag
caagccaagctaatgaaatctcagaaatttgcacctgaattggaacatttggtcgatatg
tcgaaggtgagtatggatgttatgcgcccgtggattgctaatcgggcaacggagcttctt
gggtttgaagatgaagttcttatcaactttatttatggtcttttggaaggaaaggtgaat
gggaaggaaattcaaatatcgcttactggatttatggagaaaaatactgtgaagtttatg
aaagagctttggacgctgcttatcagtgcgcaaaacaatgctagcggtgtacctcaacaa
tttttggatgccaaacaagaagaagcacggaaaaagaaggaggaggcagacaggtttgca
aacgaaattcagaaaaagaaagagaaggagaggatagatcaacaagagatgttgaagatg
gaaggaggggctggtaagaaagctaacaatgctgcattggagccaaacacaaagcatatg
tcaccaagggattcaaatgatcgttatgaggatgaaagaggagctgaaaagaggaatggt
gtgaaggcaaggaacaaggtttccagatctccaaattcagaaaattcatctttgtctcct
cgtgaaagacaccgatcacgaagtatttccaagtcgccaaaagcatcgagacgatccatt
tcttctgaaagtgatcgctctccaccaagacggcctattacaactgttcggaggcattca
cctgagggttcaatctccccaagaagaagatcaccttattccaggcaaagatctagatca
aattcccaacaaagatcaccctctccgtatcggcgtagagtacgttctccatattggcgt
agaccctcacttgtcaggcaccgcagatcaccctcacctgtccggcgccgcagatcaccc
tcaccagtcaggcgccgcagatcaccctcccctgtgcggcgccgcagatcaccctcccct
gtccggcgtcgcagatcaccctcccctgtccgacgccgcagatcaccctcccctgtccgg
cgccgcagatcaccctcgcctgtccggcgtcccagatcaccctcacctgtgcggcgtcgc
aggtcgccctctcctttgcgacgttgcagatctcgctcacctgtgcgtcgcagatcaccc
tcacctgtacgacggtcgtatcgaagatccccattgaatacacgggatcggtatgtgtct
cccttgcagcataggtcaccagttcgtagcaggaggtcaccaactcctccgcataggtct
ccgtctccacatgatcaaagttcatctcctattcagcatgattccccttcgccaatcagg
agaacatcaaagcttcaaagatctccctcacaatctcctcaagaaagaaccaggtccctt
gaaaaaacttcttccgtgccacaccggtctagctcacatgggtcattgcagagggaatta
aagaatgggaatgattcgcgtaaaagagaaacagatttcttgccatcaccagagaggtct
cgcatactctcagaatctccaccaggcgtaagaagttctagtgaagaaaggagaagaagt
ttgtctagcccagatgagagtccagttagacgaccaagggagcaaatgacacgtaatgtt
agctcaagtcctccaaggaaactaagagaacaacaacttcgtcgtggaagtccagacaca
agtgaagataagccgaaagtttctcctgctaaggttcgtaacaaggaagagtactctaag
aatcgcctgggtaataaggactccagaaacaaagagcaggagatgaagagtgggaaatct
tctgggaggggggttcctgaaagtcctgatcaacaacagtctccgaccatatataaggac
tctctacatggtgagacgcaaaatcccgatgatggtagaaagtctgatgaaaagaaccgc
tctcattcaaaaaattccaaggacagtgataggcatcgtaaacctggatctgtgcactca
tcagttgaaaaggttgatcatggtaatcgaagtggtactgttgaatctggttccgaggaa
agtgaaaaacgcagaggtggggataagggaaaaagaaagaataagagatcagagaggcaa
gaagttacttcagaggatgattacagcaatgattctgaaatagacgagaggaaggatgct
aaaaggagaaggaaagaggaaaagagatcaaggaaggagaagaagcgccgaagacgcgag
gagagacgtcacagaaaagaagaacgtcgtgcagagaagctgaaagggaagaattacagt
ggtgcttctgcttcagattgtgaacatgtaggcaggagggagcttcattcaagtgacaat
gaagagacggaggctattcagaagaaacttgagattgagttacgaaagaaggctctcgaa
tcacttaaagcaaaaaagggcattagtcattaa
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