Malus domestica (apple): 103428004
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Entry
103428004 CDS
T03194
Name
(RefSeq) structural maintenance of chromosomes protein 1-like
KO
K06636
structural maintenance of chromosome 1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103428004
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103428004
Meiosis-specific proteins
Cohesin complex and associated proteins
103428004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
TMF_TATA_bd
Laminin_II
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
103428004
NCBI-ProteinID:
XP_008364317
LinkDB
All DBs
Position
5:32480159..32489441
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSLVSQGKILRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
HLRGAQLKDLIYAFDDREKDQKGRRAFVRLVYQLASGSELQFTRAITGGAGSEYRIDGAS
VTWEEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEKY
EEEKSEAEQKASLVYQRKRTIVLERRQKKEQKEEAEKHLRLQDQLKSLKKEHSLWQLFNI
EKDIAKMTEELEAEKKSREQVMQEIDEFQLEANNKKKEQAKYLKEIAQCEKKISDRNSKL
DKSQPDLLKLKEEMSRINAKIKKSEKELAKKEQERKRHKEDIKQLQKGIQDLTAKLEDLH
EQGRDSGDKLKLDDTELREYFRIKEDAGMKTGRLRDEKEVLDRQQHADLEAQKNLEENLQ
QLRSREAELEEQEEQMQTRQKKIKENSARHRDEAKNLDNELHAMQSKNSQARTKYENLKS
KIDEIDKQLRELKADRYENERDSRLSQAVETLKRLFHGVHGRMTELCRPTQKKYNLAVTV
AMGKFMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRVKPVMERLRNLGGTAKLIF
DVVQFDPALEKAILFAVGNTLVCDELDEAKRLSWTGERFKVVTVDGILLAKSGTMTGGTS
GGMEARSKQWDDKKVEGLKKKKEQFESELEELGSIREMQIKESETTGRISGLQKKIQYAE
IEKKSIKDKLATLAREKQNIKEEIDRSSPELLKLKQAVDKRSKEINKLEKRINEIVDRIY
KDFSKSVGVANIREYEENQLKASQYMAEERLSLSSQLSKLKYQLEYEQNRDMESRINELQ
DSISKFKKALERVQKEEAAAKSAAEKASGEIDQWKKEIQEWKSKSEGCEKEIQEWNKRGS
TATTSLSKLNRQIHAKESQIEQLMSQKQEIVEKCELEQINLPIISDPMEIDSSPMGPVFD
FSQLNKSHMRDRRPSEREKLEVEFKQKMDAVISEIEKTAPNLKALDQYEAIKEKERAVTE
EFEVARIEEKEKADMFNSVKQKRYELFMDAFQHISSNIDKIYKQLTKSNTHPLGGTAYLN
LENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKAREGARANQDDEGGNGFQSIVISLKDSFYDKADALVGVYRDC
ERSCSETLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctggtctctcagggcaaaatcctccgcctggagctcgagaacttcaagtcc
tacaagggcttccagaccatcggccccttctacgacttcactgcgattattgggcccaat
ggcgccggaaagtccaacctcatggacgccataagcttcgttctcggcgtgcggacgggc
cacctccgtggggcccagctcaaggacctgatctatgccttcgacgacagggagaaggac
cagaagggccgcagggcctttgtccgcttggtttaccagctggccagcgggtcggagctc
cagttcacccgagccattaccggcggagcgggcagcgagtaccgtatcgatggggcgtct
gtgacgtgggaagagtacaatgcgaagctcaggtctcttgggattcttgtcaaggcccgg
aatttcctcgtctttcagggcgatgtggagtctattgcctccaaaaatcccaaggaactt
actgcacttcttgagcagatctctgggtctgatgaactcaagagagactatgaaaaatat
gaagaagaaaaatccgaagctgaacaaaaagcaagtcttgtttatcagagaaagagaaca
atagtattggagaggaggcaaaagaaagaacagaaagaagaagctgagaaacacctccgt
ctgcaagatcaactgaaatctttgaagaaagaacattctttatggcaattgttcaacata
gaaaaggatattgcaaaaatgactgaggagcttgaagctgaaaagaaaagccgcgaacaa
gttatgcaagaaattgatgagtttcagctagaagcaaacaataagaagaaagaacaagca
aaatatctgaaagaaattgcacaatgtgaaaagaagatttcagatagaaatagtaaactt
gacaaaagtcaaccagaccttctgaaactgaaagaggaaatgtctcgtataaatgcaaaa
atcaagaaaagtgagaaggagcttgctaagaaagaacaagaaaggaaaagacataaagag
gatataaaacagctgcagaagggaatacaggatctgactgcaaaactagaagatttacat
gaacaaggccgagatagtggcgacaaactgaagttagacgatactgaattaagggaatac
tttcgaatcaaggaagatgctgggatgaaaactggaaggctaagagatgagaaagaggtc
ctggataggcaacaacatgctgatcttgaagctcaaaagaatttggaagaaaatcttcaa
cagttgagaagtcgggaggctgaattagaggaacaagaggaacaaatgcaaacaaggcag
aaaaaaattaaagaaaattctgcgagacatagggatgaagctaaaaatctggataatgaa
ctgcatgccatgcaatctaaaaattcacaggccagaacgaaatatgaaaatctgaagtca
aaaattgatgaaatagataagcaactacgggaattgaaggctgacagatatgagaatgag
agggattccaggttgtctcaggcagtcgagactctcaaacgcctgtttcacggtgtccac
ggtcgtatgactgaactctgtaggccaacacagaaaaagtataacctcgctgttactgtt
gccatgggtaaatttatggatgcagttgtagttgaggacgaacaaacgggaaaggaatgc
atcaagtatttgaaagaacaaaggcttccccctcagacattcatacctcttcagtctgtc
cgtgtgaagcccgtaatggagagattgcgcaacttaggtggtactgcaaagctgatcttt
gatgtagttcaattcgatcctgccttggagaaggcaattctttttgcggttggcaatact
cttgtctgtgatgaacttgatgaggctaagcgtctcagctggactggtgagaggttcaaa
gttgtaactgttgatggaattctgcttgccaaatctggcacaatgactggcggtacaagt
ggtggaatggaagcaaggtcaaaacagtgggacgataaaaaagttgaaggactaaagaag
aagaaagaacaatttgagtcagagttggaagagctagggtcaattagagagatgcagata
aaagagtctgagacaactggtagaattagtggactccaaaaaaaaatccagtatgcagag
attgagaagaaaagcatcaaggacaaacttgcaaccttggcacgggaaaagcagaatata
aaagaagagattgatcgcagcagtcctgaacttcttaagttaaagcaagctgtagataag
cggagcaaggaaatcaataagcttgagaagaggataaatgaaattgttgacagaatctac
aaagattttagtaaatctgttggggtggcaaacatccgtgagtatgaggaaaatcaactc
aaggcttcccaatatatggctgaagagaggcttagtttgagtagccagctgtcaaagttg
aaataccagttagagtatgagcaaaaccgggacatggaatcacgaattaacgaactccaa
gattctattagtaaatttaaaaaagctttagaacgggttcagaaggaagaggctgcagcc
aagtcagcagcagaaaaagcttctggtgagattgatcagtggaagaaagaaatacaagaa
tggaaatccaagtcagaagggtgtgagaaggaaatccaagaatggaacaagcggggttct
acagctacaacaagtttatccaaacttaatcgacagatacacgctaaggagtcacagatt
gagcagctgatgtcacagaagcaggaaatagtagagaaatgtgaattagaacaaataaac
cttcccatcatctcagacccaatggagattgattcctccccaatgggcccagtcttcgat
tttagtcagttaaacaagtctcatatgcgggacagaaggccctctgaacgggagaagctt
gaggtggaatttaagcaaaaaatggatgccgtaatttcagaaattgaaaaaacagctcca
aatttgaaggccctggaccaatatgaggcaataaaagaaaaggaaagagctgtaactgaa
gagtttgaagtggctagaatagaagagaaggaaaaagctgatatgtttaactcagttaag
cagaagaggtacgagttgtttatggatgccttccaacatatttccagtaacattgataag
atatacaaacaactgacaaagagcaacacacatccactgggtgggacggcatatttaaat
ttggaaaatgaagatgatccatttttacatggcattaagtacactgctatgcccccaaca
aagcgctttcgtgatatggaacaactatctggcggcgagaaaactgttgcagcattggca
ttactcttttccatacacagttttaggccttcaccgtttttcatactggatgaagtcgat
gctgcactagataacttgaatgttgctaaggttgctggattcatccgttcaaaggcacgt
gaaggagccagggctaaccaagatgatgagggaggcaatggttttcagagcattgtaata
tctctaaaagatagcttctacgacaaggctgatgctttagttggggtttacagggactgc
gaaaggagctgttcggaaactctgacatttgacctgaccaagtatcgggagtcgtga
DBGET
integrated database retrieval system
