Malus domestica (apple): 103434833
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Entry
103434833 CDS
T03194
Name
(RefSeq) homeobox-DDT domain protein RLT1-like
Organism
mdm
Malus domestica (apple)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDT
WSD
HARE-HTH
Homeodomain
WHIM1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103434833
NCBI-ProteinID:
XP_028959006
LinkDB
All DBs
Position
5:44202621..44213509
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AA seq
1759 aa
AA seq
DB search
MEAASEGENQNKNHESNSKLNNSSEGQSKPKRQMKTPFQLETLEKAYALETYPSEAIRAE
LSEKLGLSDRQLQMWFCHRRLKDKKEGGPPKKQRKLVAALPEPPIDDLAHGSEPGSDYGS
GSGSGSSPFGHAELRNVVARGVADDIPMRGRRYYESPQSILELRAIACVEAQLGEPLRED
GPLLGIEFDPLPPDAFGAPLAVAEQHKRSAHALEGKYERHDAKPIKATPRAIHEYPFLQD
HSSIRSDAYGQVSQSHFHDSAIDGPTARTSSFAVGNEPLSRVHGVHGHASRVRLLSQQER
QVVPYSSPVDDGSVAQRDSFTNVRVNTQFSDPPVVAPALENSNVLSEGQINDSILRMERK
RKSEEARIAKEVEAHELRIRKELEKQDILRRKNEERMRKEMEKQDRERRKEEERLMRERQ
REEERLKREQKREIERREKFLQKEYIRAEKRRQKEELRKEREVVKRKAALEKATARRLAK
ESMELIEDEQLELMELAATSKGLSSIICIDLDTLQNLDAFRDSLVAFPPRSVQLKRPFTI
QPWINSEANIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLRLI
IKDIEDVARTPTGLGINQNGAANPGGGHPQIVEGAYAWGFDIRNWQQHLSLLTWPEIFRQ
LALSAGFGPQLKKRSIAWSYTPDNHEGKGCQDAISNLRNGSAAVNAFAVMQEKGLLAPRR
SRHRLTPGTVKFAAFHVLSLEGNKGLTVLDLADKIQKSGLRDLTTSKTPEASISVALTRD
TKLFERIAPSTYRVRAAYRKDPDDAEAILSAARKKIQIFENGILAAEDVDDVERDDVEND
EVERDEDSECEVDEDPEVDDLATPSVAKKSPDDYNEVISFSENGKDSLSNDVGLAVKNEF
DKDVLCSSLTGSKDAFCPSASSKQCVLGADISTSHLDQENMEIDESKSGESWVQGLTEGE
YSDLSVEERLSGLVALIGVANEGNTIRVVLEDRLEAANALKKQMWAEAQLDKSRLKEENV
GRLDFPSLMGGKAEVQATGVEDGLSPLRDVDNRNIDASPVTAENEKSIHGSQGVQNQLNG
VHGERTSAAQDISMGSDNFLTQQLAYASKRSRSQLKSYIAHRAEEMFAYRSCLCQDRRHN
RYWQFVASASRHDPGSGRIFIELNNGSWRLIDTEEAFDALVTSLDARGIRESHLRLMLQK
IEASFKENVQKNTHRPNNAGPSKNHVKDEADEMDSSPDFPSHFDSPESAVCALNSDTAQT
SSSFRIELDRSETEKRAALRRYQDFQKWMWKECSNSSTLCATKYGKERCRPLFDVCDVCL
NCYYFEDSHCYTCHQTFDAFNRNFDFGEHVMQCKEKRMLEPWNFDIPCTSLPLARRLLKT
LIALVEVSIPPEALQLSWTDDRRKMWGEKLNASSSMDELLQILTLVETAVKKDFLSSHFA
VTEELLGSCKQPGVVRDYLASGSVPVLPWIPHTTAAVALRLLEIDSSITYVKQAKAEPTT
DKEVGEYLNQPMRLPTSRSETELTEAGLNEYMREENSTHLKSGRNSFRRGRGGREQGRGK
RWQKKVSNPKSVASRQNIRGNENLNQGLRTVGKRTQGQGSGRGRRTVRKRRMKNRAVEGT
PLGRVSDMRSSPESGGESPRNLAEEWDDEKIDMRGDEQGEGFERVDALESEDDDQAVGYE
QGNWEIGFDGTSSGWNGGLVEASDDDIDASEDDNNVMEEVRDEDSEGDVDMSDASDEMLP
NTMRNDDGTESESSDDSSE
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgtcggagggagaaaatcagaataaaaatcatgagagcaatagtaaactt
aacaattccagtgaggggcagagcaagcccaagcgccagatgaagaccccctttcagctc
gaaacccttgagaaagcatatgcattggagacctacccgtcggaggcgattagggctgag
ctatcggaaaaattagggctttccgatcggcagttgcagatgtggttctgtcacagaagg
ctgaaggacaagaaggaagggggtccaccgaagaagcagcggaaattggtagccgctttg
cctgagccccccattgatgatttggctcatgggtcagagccgggtagtgattatgggtcc
ggttcaggctccgggtcaagcccctttggtcacgcggagttgcggaatgtggtggctagg
ggtgtggctgatgacattccaatgagggggaggaggtattatgagtcgccacagtcgatc
ttggagctcagggccattgcttgtgtggaagctcaattgggagagccattgagggaagat
ggcccgcttctcgggatagagtttgatcctttgccgcccgatgcatttggggcacctcta
gcagttgcggagcagcataagcggtctgcccatgctttggagggcaaatatgagcgtcat
gatgcaaaaccaattaaagctacgccaagggctatccatgaatatccctttcttcaagat
cactccagtattcggtctgatgcatacggacaagtctctcaatctcattttcacgattca
gcaattgatggcccaactgcaagaacttcgtcatttgctgttggaaatgagccattgtca
agggttcatggtgtccatggtcatgcgtcacgtgttcgtcttctgtctcagcaggagagg
caagtagtgccctactcatctcctgttgatgatggcagtgtagcacaaagggactccttc
actaacgtgagggtaaatactcagtttagtgatccccctgttgttgcacctgcgctggaa
aactctaatgtattatctgaaggtcaaattaatgactctattctgagaatggagaggaaa
cgcaagagtgaagaagcgagaatcgctaaagaagttgaagctcatgagttgcggatccgg
aaggagctggagaaacaagatattctgaggagaaagaatgaggaacgaatgaggaaggaa
atggaaaaacaagaccgtgagagacgaaaagaagaagagaggttgatgcgtgagaggcaa
cgcgaggaagagagattaaagcgtgagcaaaaacgtgaaattgaacgaagggaaaagttt
ttacagaaagaatatataagagctgagaaaaggaggcagaaggaagagcttcgcaaagag
agagaggtagtgaaacgcaaagctgcacttgagaaggcgactgcacgcaggcttgctaaa
gagtctatggagcttattgaggatgaacaactagaattaatggagttggctgctacaagc
aagggtttatcctccattatttgtattgatcttgacaccctgcaaaaccttgatgcattc
agagattctttggttgcattcccacctaggtctgtgcagttaaaaagaccatttacaatt
cagccatggatcaattcagaggcgaatattggtaaccttctcatggtttggagattctta
attacctttgctgatgttctcgagttatggccttttactcttgatgagtttgtccaagca
tttcatgactatgattcaaggttgttaggagagatccatgttgctctcttgaggttgatt
atcaaagatattgaagatgttgcaaggactcctactggattaggaataaatcaaaatggt
gctgctaatcctggaggtggacacccacagattgttgaaggagcttatgcatggggcttt
gatatacggaactggcagcagcacttaagtctgctgacatggcctgaaatattccgtcaa
ctagcactctctgctggatttgggccacagctgaagaaaaggagtatcgcatggtcatac
acacctgataatcacgagggtaaaggttgtcaggatgcaatttctaatctaagaaatggt
tctgcagctgtaaatgcatttgcagtaatgcaagagaaaggcttactggctccacgaaga
tctagacaccggttgactcctggaactgtaaagtttgcagcttttcatgtgctctcactt
gagggaaataagggactaacagtgttagatcttgcagacaagattcagaaatctggcctt
cgggacctgacaacaagcaagactcctgaagcgtcaatttctgttgctttgacaagagat
actaagctttttgaaagaatagctccttcaacataccgtgtacgagctgcttacagaaag
gatcctgatgatgctgaggccatactttctgcagccaggaagaaaattcaaatatttgaa
aatgggattttagctgcagaagatgtcgatgatgttgaaagagatgatgttgaaaatgat
gaggttgaaagagacgaagactctgaatgtgaagttgatgaagatcctgaagttgatgat
ttagctactccatcagttgcaaagaaatcccctgatgattacaatgaagtaattagtttc
tcagaaaatggaaaggacagtttaagcaatgatgttggacttgctgtgaaaaatgagttt
gataaggatgttttatgctcctcattgactggttccaaagatgcattctgtcctagtgct
tcctcaaaacagtgtgttttgggtgcagatattagtacaagtcatcttgaccaagaaaat
atggagattgatgaaagcaagtcaggtgagtcatgggttcaaggacttacagaaggggag
tattctgacctcagcgtggaagagcgtctgagtggtcttgttgccttaattggtgttgca
aatgaaggaaataccattcgtgttgttctcgaggatcgcttagaagctgcaaatgctctt
aagaagcaaatgtgggcagaggcacagctggataaaagtcgcctaaaagaagagaatgtt
ggtaggttagattttccatctttaatgggaggcaaagctgaagtacaagctactggagta
gaggacggcctaagtcccttacgggatgttgataacaggaacattgatgcatctccagtc
actgcagaaaatgaaaagtcaatccatgggtcacaaggtgttcagaatcagcttaatggt
gtgcatggtgaaaggacctcagcagcccaagatatctccatgggttctgataattttttg
actcagcaacttgcatatgcatcaaaaaggtcgcgctcacaattaaaatcgtatattgca
catagagcagaggagatgtttgcatacaggtcctgcctctgtcaagatcgtaggcataat
cgatactggcaatttgttgcatctgcatcaagacatgaccctggttcaggcagaattttc
attgaattgaacaatggaagctggaggcttattgacactgaagaggcctttgatgctctt
gttacgtctttggacgcacgcgggattagggaatctcatttacgcttaatgttgcaaaag
attgaggcatccttcaaggagaatgttcagaaaaatacgcatcgtcctaacaatgcaggc
ccaagtaaaaaccatgttaaagatgaagctgacgaaatggattctagtcctgatttccct
tctcattttgacagccctgaaagtgcagtttgtgctttgaactctgatacagcgcagacc
tcatcttctttcagaattgagcttgacagaagtgaaactgagaaaagggctgccttgaga
aggtatcaagattttcagaagtggatgtggaaagaatgctctaattcatctaccttatgt
gccacgaaatatgggaaggagagatgcagaccgctgtttgatgtctgcgatgtctgcctc
aattgttattactttgaggattcccactgctatacttgccatcagacttttgatgctttc
aacagaaattttgactttggtgaacatgtaatgcaatgtaaagaaaaaaggatgttggaa
ccttggaatttcgatattccttgtacttctcttcccttggccagaagattgctcaagacg
ttaatagctcttgttgaggtatctattccaccagaagctcttcaattgtcttggactgat
gaccgtcgaaagatgtggggagagaaactgaatgcatcatcatcaatggatgaacttctt
cagatattgactctggttgagactgcagtgaagaaagactttctgtcatcacactttgca
gtgacggaggaattgctgggctcctgcaaacagccaggggttgttcgcgattatctagcc
agtggatccgttcctgtacttccttggataccacataccactgcagctgtggctctgagg
cttcttgagatagattcatcaattacatatgtaaagcaagcgaaagctgagcccaccaca
gacaaggaagtgggagaatatcttaatcaacctatgagacttccgacatcaaggagtgag
actgaactaactgaagcaggcctcaatgaatacatgagggaagaaaacagtactcacctg
aaaagtggacgaaacagctttagacgtggtagaggaggtcgagagcaagggcgcggtaaa
aggtggcagaaaaaagtgagtaatcccaaatctgttgcaagtcgtcagaacattaggggt
aatgagaatttgaatcaagggttgagaacggtgggaaaacgaacgcagggacaagggagt
ggacggggtcgccgaactgttagaaagaggagaatgaagaacagggctgttgaggggaca
cctctgggccgtgtgagtgacatgcgcagcagccctgagagtggaggagaatcaccaaga
aacttggctgaggaatgggatgatgaaaagatcgatatgagaggtgacgagcaaggagag
ggatttgaacgagtagacgcattggaatcagaagacgacgaccaagcagtgggatacgaa
caaggaaactgggaaattggatttgatgggacttccagcggatggaacgggggtttagta
gaagctagtgacgacgatatagatgcttcagaagatgacaataatgtcatggaagaagtg
agagatgaagattcagaaggggatgtagatatgagcgatgcctcggacgaaatgctacca
aacacgatgagaaacgatgatggcacagaatcggaaagttcagacgactctagtgaatga
DBGET
integrated database retrieval system
