KEGG   Malus domestica (apple): 103434833
Entry
103434833         CDS       T03194                                 
Name
(RefSeq) homeobox-DDT domain protein RLT1-like isoform X1
Organism
mdm  Malus domestica (apple)
SSDB
Motif
Pfam: WSD DUF8799 DDT HARE-HTH Homeodomain WHIM1 Homeobox_KN
Other DBs
NCBI-GeneID: 103434833
NCBI-ProteinID: XP_070677581
LinkDB
Position
05:join(42883341..42883485,42883583..42884038,42884655..42884731,42885399..42885806,42885881..42885970,42886050..42886214,42886314..42886536,42886946..42887046,42887613..42887699,42887800..42887949,42888039..42888194,42888712..42888921,42889055..42889759,42889846..42890400,42890800..42891432,42891534..42891638,42891892..42892152,42892316..42893071)
AA seq 1760 aa
MEAASEGENQNKNHESNSKLNNSSEGQSKPKRQMKTPFQLETLEKAYALETYPSEAIRAE
LSEKLGLSDRQLQMWFCHRRLKDKKEGGPPKKQRKLVAALPEPPIDDLAHGSEPGSDYGS
GSGSGSSPFGHAELRNVVARGVADDIPMRGRRYYESPQSILELRAIACVEAQLGEPLRED
GPLLGIEFDPLPPDAFGAPLAVAEQHKRSAHALEGKYERHDAKPIKATPRAIHEYPFLQD
HSSIRSDAYGQVSQSHFHDSAIDGPTARTSSFAVGNEPLSRVHGVHGHASRVRLLSQQER
QVVPYSSPVDDGSVAQRDSFTNVRVNTQFSDPPVVAPALENSNVLSEGQINDSILRMERK
RKSEEARIAKEVEAHELRIRKELEKQDILRRKNEERMRKEMEKQDRERRKEEERLMRERQ
REEERLKREQKREIERREKFLQKEYIRAEKRRQKEELRKEREVVKRKAALEKATARRLAK
ESMELIEDEQLELMELAATSKGLSSIICIDLDTLQNLDAFRDSLVAFPPRSVQLKRPFTI
QPWINSEANIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLRLI
IKDIEDVARTPTGLGINQNGAANPGGGHPQIVEGAYAWGFDIRNWQQHLSLLTWPEIFRQ
LALSAGFGPQLKKRSIAWSYTPDNHEGKGCQDAISNLRNGSAAVNAFAVMQEKGLLAPRR
SRHRLTPGTVKFAAFHVLSLEGNKGLTVLDLADKIQKSGLRDLTTSKTPEASISVALTRD
TKLFERIAPSTYRVRAAYRKDPDDAEAILSAARKKIQIFENGILAAEDVDDVERDDVEND
EVERDEDSECEVDEDPEVDDLATPSVAKKSPDDYNEVISFSENGKDSLSNDVGLAVKNEF
DKDVLCSSLTGSKDAFCPSASSKQCVLGADISTSHLDQENMEIDESKSGESWVQGLTEGE
YSDLSVEERLSGLVALIGVANEGNTIRVVLEDRLEAANALKKQMWAEAQLDKSRLKEENV
GRLDFPSLMGGKAEVQATGVEDGLSPLRDVDNRNIDASPVTAENEKSIHGSQGVQNQLNG
VHGERTSAAQDISMGSDNFLTQQLAYASKRSRSQLKSYIAHRAEEMFAYRSLPLGQDRRH
NRYWQFVASASRHDPGSGRIFIELNNGSWRLIDTEEAFDALVTSLDARGIRESHLRLMLQ
KIEASFKENVQKNTHRPNNAGPSKNHVKDEADEMDSSPDFPSHFDSPESAVCALNSDTAQ
TSSSFRIELDRSETEKRAALRRYQDFQKWMWKECSNSSTLCATKYGKERCRPLFDVCDVC
LNCYYFEDSHCYTCHQTFDAFNRNFDFGEHVMQCKEKRMLEPWNFDIPCTSLPLARRLLK
TLIALVEVSIPPEALQLSWTDDRRKMWGEKLNASSSMDELLQILTLVETAVKKDFLSSHF
AVTEELLGSCKQPGVVRDYLASGSVPVLPWIPHTTAAVALRLLEIDSSITYVKQAKAEPT
TDKEVGEYLNQPMRLPTSRSETELTEAGLNEYMREENSTHLKSGRNSFRRGRGGREQGRG
KRWQKKVSNPKSVASRQNIRGNENLNQGLRTVGKRTQGQGSGRGRRTVRKRRMKNRAVEG
TPLGRVSDMRSSPESGGESPRNLAEEWDDEKIDMRGDEQGEGFERVDALESEDDDQAVGY
EQGNWEIGFDGTSSGWNGGLVEASDDDIDASEDDNNVMEEVRDEDSEGDVDMSDASDEML
PNTMRNDDGTESESSDDSSE
NT seq 5283 nt   +upstreamnt  +downstreamnt
atggaggcggcgtcggagggagaaaatcagaataaaaatcatgagagcaatagtaaactt
aacaattccagtgaggggcagagcaagcccaagcgccagatgaagaccccctttcagctc
gaaacccttgagaaagcatatgcattggagacctacccgtcggaggcgattagggctgag
ctatcggaaaaattagggctttccgatcggcagttgcagatgtggttctgtcacagaagg
ctgaaggacaagaaggaagggggtccaccgaagaagcagcggaaattggtagccgctttg
cctgagccccccattgatgatttggctcatgggtcagagccgggtagtgattatgggtcc
ggttcaggctccgggtcaagcccctttggtcacgcggagttgcggaatgtggtggctagg
ggtgtggctgatgacattccaatgagggggaggaggtattatgagtcgccacagtcgatc
ttggagctcagggccattgcttgtgtggaagctcaattgggagagccattgagggaagat
ggcccgcttctcgggatagagtttgatcctttgccgcccgatgcatttggggcacctcta
gcagttgcggagcagcataagcggtctgcccatgctttggagggcaaatatgagcgtcat
gatgcaaaaccaattaaagctacgccaagggctatccatgaatatccctttcttcaagat
cactccagtattcggtctgatgcatacggacaagtctctcaatctcattttcacgattca
gcaattgatggcccaactgcaagaacttcgtcatttgctgttggaaatgagccattgtca
agggttcatggtgtccatggtcatgcgtcacgtgttcgtcttctgtctcagcaggagagg
caagtagtgccctactcatctcctgttgatgatggcagtgtagcacaaagggactccttc
actaacgtgagggtaaatactcagtttagtgatccccctgttgttgcacctgcgctggaa
aactctaatgtattatctgaaggtcaaattaatgactctattctgagaatggagaggaaa
cgcaagagtgaagaagcgagaatcgctaaagaagttgaagctcatgagttgcggatccgg
aaggagctggagaaacaagatattctgaggagaaagaatgaggaacgaatgaggaaggaa
atggaaaaacaagaccgtgagagacgaaaagaagaagagaggttgatgcgtgagaggcaa
cgcgaggaagagagattaaagcgtgagcaaaaacgtgaaattgaacgaagggaaaagttt
ttacagaaagaatatataagagctgagaaaaggaggcagaaggaagagcttcgcaaagag
agagaggtagtgaaacgcaaagctgcacttgagaaggcgactgcacgcaggcttgctaaa
gagtctatggagcttattgaggatgaacaactagaattaatggagttggctgctacaagc
aagggtttatcctccattatttgtattgatcttgacaccctgcaaaaccttgatgcattc
agagattctttggttgcattcccacctaggtctgtgcagttaaaaagaccatttacaatt
cagccatggatcaattcagaggcgaatattggtaaccttctcatggtttggagattctta
attacctttgctgatgttctcgagttatggccttttactcttgatgagtttgtccaagca
tttcatgactatgattcaaggttgttaggagagatccatgttgctctcttgaggttgatt
atcaaagatattgaagatgttgcaaggactcctactggattaggaataaatcaaaatggt
gctgctaatcctggaggtggacacccacagattgttgaaggagcttatgcatggggcttt
gatatacggaactggcagcagcacttaagtctgctgacatggcctgaaatattccgtcaa
ctagcactctctgctggatttgggccacagctgaagaaaaggagtatcgcatggtcatac
acacctgataatcacgagggtaaaggttgtcaggatgcaatttctaatctaagaaatggt
tctgcagctgtaaatgcatttgcagtaatgcaagagaaaggcttactggctccacgaaga
tctagacaccggttgactcctggaactgtaaagtttgcagcttttcatgtgctctcactt
gagggaaataagggactaacagtgttagatcttgcagacaagattcagaaatctggcctt
cgggacctgacaacaagcaagactcctgaagcgtcaatttctgttgctttgacaagagat
actaagctttttgaaagaatagctccttcaacataccgtgtacgagctgcttacagaaag
gatcctgatgatgctgaggccatactttctgcagccaggaagaaaattcaaatatttgaa
aatgggattttagctgcagaagatgtcgatgatgttgaaagagatgatgttgaaaatgat
gaggttgaaagagacgaagactctgaatgtgaagttgatgaagatcctgaagttgatgat
ttagctactccatcagttgcaaagaaatcccctgatgattacaatgaagtaattagtttc
tcagaaaatggaaaggacagtttaagcaatgatgttggacttgctgtgaaaaatgagttt
gataaggatgttttatgctcctcattgactggttccaaagatgcattctgtcctagtgct
tcctcaaaacagtgtgttttgggtgcagatattagtacaagtcatcttgaccaagaaaat
atggagattgatgaaagcaagtcaggtgagtcatgggttcaaggacttacagaaggggag
tattctgacctcagcgtggaagagcgtctgagtggtcttgttgccttaattggtgttgca
aatgaaggaaataccattcgtgttgttctcgaggatcgcttagaagctgcaaatgctctt
aagaagcaaatgtgggcagaggcacagctggataaaagtcgcctaaaagaagagaatgtt
ggtaggttagattttccatctttaatgggaggcaaagctgaagtacaagctactggagta
gaggacggcctaagtcccttacgggatgttgataacaggaacattgatgcatctccagtc
actgcagaaaatgaaaagtcaatccatgggtcacaaggtgttcagaatcagcttaatggt
gtgcatggtgaaaggacctcagcagcccaagatatctccatgggttctgataattttttg
actcagcaacttgcatatgcatcaaaaaggtcgcgctcacaattaaaatcgtatattgca
catagagcagaggagatgtttgcatacaggtccctgcctcttggtcaagatcgtaggcat
aatcgatactggcaatttgttgcatctgcatcaagacatgaccctggttcaggcagaatt
ttcattgaattgaacaatggaagctggaggcttattgacactgaagaggcctttgatgct
cttgttacgtctttggacgcacgcgggattagggaatctcatttacgcttaatgttgcaa
aagattgaggcatccttcaaggagaatgttcagaaaaatacgcatcgtcctaacaatgca
ggcccaagtaaaaaccatgttaaagatgaagctgacgaaatggattctagtcctgatttc
ccttctcattttgacagccctgaaagtgcagtttgtgctttgaactctgatacagcgcag
acctcatcttctttcagaattgagcttgacagaagtgaaactgagaaaagggctgccttg
agaaggtatcaagattttcagaagtggatgtggaaagaatgctctaattcatctacctta
tgtgccacgaaatatgggaaggagagatgcagaccgctgtttgatgtctgcgatgtctgc
ctcaattgttattactttgaggattcccactgctatacttgccatcagacttttgatgct
ttcaacagaaattttgactttggtgaacatgtaatgcaatgtaaagaaaaaaggatgttg
gaaccttggaatttcgatattccttgtacttctcttcccttggccagaagattgctcaag
acgttaatagctcttgttgaggtatctattccaccagaagctcttcaattgtcttggact
gatgaccgtcgaaagatgtggggagagaaactgaatgcatcatcatcaatggatgaactt
cttcagatattgactctggttgagactgcagtgaagaaagactttctgtcatcacacttt
gcagtgacggaggaattgctgggctcctgcaaacagccaggggttgttcgcgattatcta
gccagtggatccgttcctgtacttccttggataccacataccactgcagctgtggctctg
aggcttcttgagatagattcatcaattacatatgtaaagcaagcgaaagctgagcccacc
acagacaaggaagtgggagaatatcttaatcaacctatgagacttccgacatcaaggagt
gagactgaactaactgaagcaggcctcaatgaatacatgagggaagaaaacagtactcac
ctgaaaagtggacgaaacagctttagacgtggtagaggaggtcgagagcaagggcgcggt
aaaaggtggcagaaaaaagtgagtaatcccaaatctgttgcaagtcgtcagaacattagg
ggtaatgagaatttgaatcaagggttgagaacggtgggaaaacgaacgcagggacaaggg
agtggacggggtcgccgaactgttagaaagaggagaatgaagaacagggctgttgagggg
acacctctgggccgtgtgagtgacatgcgcagcagccctgagagtggaggagaatcacca
agaaacttggctgaggaatgggatgatgaaaagatcgatatgagaggtgacgagcaagga
gagggatttgaacgagtagacgcattggaatcagaagacgacgaccaagcagtgggatac
gaacaaggaaactgggaaattggatttgatgggacttccagcggatggaacgggggttta
gtagaagctagtgacgacgatatagatgcttcagaagatgacaataatgtcatggaagaa
gtgagagatgaagattcagaaggggatgtagatatgagcgatgcctcggacgaaatgcta
ccaaacacgatgagaaacgatgatggcacagaatcggaaagttcagacgactctagtgaa
tga

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