Malus domestica (apple): 103436944
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Entry
103436944 CDS
T03194
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103436944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103436944
03032 DNA replication proteins [BR:
mdm03032
]
103436944
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
103436944
Prokaryotic type
103436944
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
103436944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
103436944
NCBI-ProteinID:
XP_008373621
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All DBs
Position
6:5659567..5662253
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AA seq
578 aa
AA seq
DB search
MVSSDDDRLATEAVEKVTDSEKKKKKKHRDKDSNLDKDFMIKPQSSTPSLDTSQWPILLK
NYDRLNVRTGHYTPLPSGFSPLKRPLAEYIRYGVLNLDKPANPSSHEVVAWIKRILRVEK
TGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSAVPDVAKVARALESLT
GAVFQRPPLISAVKRQLRIRTIYESKLLEYEADKHLVVFWISCEAGTYVRTLCVHLGLLL
GVGGHMQELRRVRSGIMGEKDNMVTMHDVMDAQWAYDTNRDESYLRRVIMPLEVLLTSYK
RLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMAT
CDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIAEGKLDKHGKPTENTPQEWMRNVV
LPVGGDSIVASTAGALATETAVAEKETTLVDKEKKDKKKKDKHKDEKETKEGRKRKLEEA
TESPVAVPAKKSKGEEVEPEVEKSEKKKKKKDKENGTVDNVEAGSPEAEKSEKKKKKKKN
KDAEDNGTVASAGAGDGEADKSEKKKKKKKSKADAEEV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggtttcatctgatgatgaccgattggccactgaggctgtggagaaagtgacagattca
gagaagaagaagaagaagaaacatagggacaaggacagcaatttggacaaagacttcatg
atcaagccccagagctcaactccctccttggacacctctcagtggcctatccttcttaaa
aattatgaccgcctcaatgttcgaacgggacactacactcctctaccctcagggttttcc
ccccttaagaggcctcttgctgagtacatccgatatggtgttctcaatcttgacaagcct
gcaaacccctcgtcgcacgaggttgtcgcttggattaagcgcatccttcgtgttgagaaa
actggccacagcggtaccctggatcctaaggttacaggtaatctcattgtctgcattgac
cgagccacacgacttgtcaagtcccagcagggtgcagggaaagagtatgtttgtgttgcc
cgcttgcattcagctgtgcctgatgttgccaaggtggctcgggcccttgaatccctgact
ggggctgtctttcagaggccacctttgatatcagccgtcaaaaggcagcttaggattagg
actatctatgaaagcaagcttcttgagtatgaggcagataaacatttggttgttttctgg
atttcttgcgaagcaggaacctatgtgcgtacgctctgtgtgcatttgggtctgcttctt
ggtgtgggaggtcatatgcaggagcttaggagggtcaggtctgggatcatgggtgagaaa
gacaacatggtcacaatgcacgatgtcatggatgctcagtgggcttatgacactaatagg
gatgagagttatttgaggagggtcatcatgcctcttgaggttctcttgactagttataag
agattggttgtcaaggactcagcagtgaatgccatttgctacggtgccaagttaatgatt
ccagggctgctcaggtttgagaacgatatcgaggtaggagaggaagttgtgctgatgact
accaaaggagaagccattgcattgggaattgctgagatgaccactgctgtgatggcaact
tgtgatcatggtgtggtggcaaagattaagagggtggtgatggatcgggatacttaccca
agaaagtggggattgggaccgagggcatccatgaagaagaaattgattgccgaaggaaaa
ttggataagcatgggaagcccactgagaatactccgcaagaatggatgaggaatgtggtt
ttgcctgttggtggggattctattgttgcaagcactgctggtgcacttgccactgaaact
gctgtggcagagaaggagaccactctcgtagacaaggagaagaaggataagaaaaagaag
gacaaacataaggatgaaaaggaaactaaggaggggcgtaagcgcaaactagaggaagcc
acagagagccctgttgcagttcctgcgaagaaaagcaaaggcgaagaagttgagcctgaa
gttgagaagtcagaaaagaaaaagaagaaaaaggacaaagagaatggcaccgtggataat
gttgaagctggttcacctgaagcagaaaagtctgagaagaagaagaagaagaagaaaaac
aaagacgctgaggacaatggtactgtggcttctgccggcgctggtgatggcgaggctgat
aagagtgagaaaaagaagaaaaagaaaaagagtaaagcagatgcagaagaagtttag
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