Malus domestica (apple): 103442343
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Entry
103442343 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103442343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdm02000
]
103442343
04147 Exosome [BR:
mdm04147
]
103442343
04090 CD molecules [BR:
mdm04090
]
103442343
Enzymes [BR:
mdm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103442343
Transporters [BR:
mdm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103442343
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103442343
CD molecules [BR:
mdm04090
]
Proteins
103442343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_21
AAA_15
nSTAND1
DUF87
RsgA_GTPase
AAA_30
Glyco_transf_22
DUF4044
Motif
Other DBs
NCBI-GeneID:
103442343
NCBI-ProteinID:
XP_008379345
LinkDB
All DBs
Position
9:complement(3293946..3301236)
Genome browser
AA seq
1247 aa
AA seq
DB search
MAEPAAEAKTLPEAEKKKEQSLPFFQLFSFADKYDWLLMIFGSLGAVVHGSSMPVFFLMF
GEMVNGFGENQMNLQKMTAEVAKYALYFVYLGLIVCVTSYAEIACWMYTGERQVSRLRKK
YLEAVLKQDVGFFDTDARTGDIVFSISTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV
SAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIMADQAIAQVRTVYSYVG
ESKALNSYSDAIQNTLQLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGG
KAFTAIFSAIVGGMSLGQSFSNLGAFSKGKSAGYKLMEIIKQKPTIVQDPLDGKCLSDVS
GNIEFKEVTFSYPSRPDVIIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQG
QVLIDSVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMEDVEVAASSANA
HSFITLLPSGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDASSESIV
QEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGAYASLIRFQ
EMVGNRDFRNPSTRCSRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNAET
DRKTRAPKNYFFRLLKLNAPEWPYSIMAAIGSVLSGFIGTTFAILMGNMIEVFYYKNPAS
MERKTKEYVFMYIGVGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEE
EHNSNLLTTKLATDAADVKSAISERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPL
LVLSNYAQQLSLKGFAGDTAKAHAKTSMIAGRSXDRRTVAAFNAQTRSLSLLHELRLPQL
EAPPQPTAGVLFGLSQXALHASEALILWYGAHLVSKGVSTFSKVIKVFVVLVVTANSVAE
TVSLAPEIIRGGEAVGSVFSILDRQTKIDPDDPEAEVVESVRGEIELRHVDFAYPSRPDV
MVFKDFSLRIRTGQSQALVGASGSGKSSVIALIERFYDPMVGKVMIDGKDIRRLNLKSLR
LKIGLVQQEPALFASSIFENIAYGKEGATEAEVIEAARTANVHGFVSGLPDGYKTPVGER
GVQLSGGQKQRIAIARAVLKDPRILLLDEATSALDAESECVLQEALERLMRGRTTVLVAH
RXSTIRGVDSIGVVQDGRIVEHGSHSELASRPDGAYTRLLQLQNHHI
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccagcggcagaggcgaagacattgccggaggcggagaagaagaaggagcag
agcctgccctttttccagctcttctccttcgcagataagtacgattggctcctcatgatc
ttcggaagcttgggcgccgtcgtgcacggctcctccatgccggtgttcttcctcatgttc
ggggaaatggttaacgggttcggcgaaaaccaaatgaatttgcagaaaatgaccgcagaa
gtagcaaagtatgctctgtactttgtgtatctcggtctcatagtatgcgtaacatcctac
gcagagattgcatgctggatgtacaccggcgagaggcaggtgagcaggctgaggaagaag
tatctggaggccgtgctgaaacaggacgtcggcttcttcgacaccgacgctagaactgga
gacattgtctttagtatctcaacggacactcttctggtccaagatgccatcagtgagaag
gtggggaacttcatacactatctgtcaacgtttctggcggggctggtggtagggtttgtg
tcagcatggaggctggcgctgctgagtattgcggtgattcccggaatcgcttttgccggc
ggcttatatgcctacacactcaccggcctgacgtccaaaagtcgccagtcgtatgccaat
gcagggataatggctgatcaggccattgcgcaagttcggacagtttattcatacgttggt
gaaagcaaggccctcaattcgtattcggatgcaatacagaacaccttgcagcttggttac
aaggccggaatggccaaaggtctcggcctagggtgtacctacggcattgcttgtatgtca
tgggcactcgttttctggtacgctggtgtgtttatccgaaacgggcagactgatggtggg
aaggcgttcaccgccattttctccgccattgttggtggcatgagcttgggccagtcattt
tcgaacctcggtgcctttagcaaaggtaaatcagccggatacaagttgatggagataatt
aagcaaaagccaaccatagttcaagaccccttggacggaaagtgcttatcggatgttagt
ggcaatatcgaattcaaggaagtaaccttcagctacccttcgagaccggatgttattatc
ttccgagatttttcgatcttctttccagccggaaagacggttgccgttgttggtggcagt
ggttcagggaagagcactgttgtctctctaatcgaaaggttctacgatcctaaccagggg
caggttttgattgatagcgtggacataaaaacgctgcaattgaaatggttgcgcgatcag
attgggctggtaaaccaggaaccggcactctttgcaactacgatactcgagaacattctc
tatggaaagcctgacgcaacaatggaagacgttgaagttgcggcttcctcagcgaacgct
cacagtttcatcaccttgcttccaagcggatataacactcaggtaggagagcgaggagtt
caactctctggtggtcaaaagcagaggattgcaattgccagagcaatgttgaaaaacccg
aagatcctcctacttgacgaagcaaccagcgcccttgatgcaagctcggagagcattgtt
caagaagctctagaccgtctcatggtcggaagaacaaccgttgttgtggcgcatcgcctt
tccaccattagaaatgttgatagcattgctgttatacaacaaggccaagttgtcgagaca
ggaacacatgaagaactgattgctaaagcaggggcctacgcttctctaattcgattccaa
gaaatggttgggaacagagacttcaggaacccatctactcgctgctcgcgctcatcacgt
ctaagccactcattgtcaacgaagtctttaagccttcggtctggcagcttaaggaacctg
agctattcgtacagtacgggtgctgatgggcggatagagatgatttcaaatgctgaaact
gacaggaaaactcgagctcctaagaactatttcttccggcttctgaagctaaacgctccc
gaatggccctattcaatcatggccgctataggatcagtactctccgggttcatcggtaca
acatttgctattctaatgggcaacatgattgaggttttctactataaaaaccccgcctca
atggaaaggaagacgaaggaatacgttttcatgtacattggagtcgggctatacgctgtg
gttgcgtatttgatacagcattacttcttcagcatcatgggagagaacctcactactaga
gtgagaaggatgatgcttgcagcaatcttgaggaacgaagttggatggttcgatgaggag
gagcacaactccaaccttctaacaactaaattggcaacggatgctgctgatgtgaaatca
gctatttctgagaggatatctgtgatattgcagaacatgacttcactcctcacttcattc
attgttgccttcatagtggaatggagagtctccctcctcattttagctaccttcccactt
cttgtgctttccaactatgctcagcaactttctttgaagggctttgctggagacacagcc
aaagctcatgcaaagacgagcatgattgcagggaggagtngagatcgtcggacagtcgcc
gcgttcaatgcccaaacaagatccctctctcttctccacgagctccgtctcccacagctg
gaagctccgccgcagccaactgctggcgtcctattcggactctctcaantcgctctccat
gcatctgaagctctcattttgtggtatggtgcccacctcgttagcaaaggtgtctcgacc
ttctcgaaagttattaaggttttcgttgtccttgttgtaacggccaattcagttgctgaa
accgtgagccttgccccggagattattaggggcggtgaagctgttggttcggttttttca
atcctcgatcgtcaaacaaagattgatccggatgatcctgaggctgaggtggttgaatca
gttcgcggagaaattgaacttaggcatgttgattttgcgtacccatcgcgacctgatgtc
atggtgttcaaagattttagtctcagaatccgcactggccaaagccaagcacttgttgga
gctagtggttcaggaaagagttccgtgattgcattgatcgagcggttttatgatccgatg
gttggtaaagtaatgatcgatggcaaagacattcgccgactgaacttgaagtcacttagg
ttgaagattggattggtgcaacaagaaccagccctgtttgcatcaagcattttcgaaaac
attgcctacggcaaagaaggcgcgaccgaagcagaagtaattgaagctgcacgtactgcc
aacgtgcatggttttgttagcgggttgccagacggatacaaaaccccggtgggggagaga
ggagttcagctctccggtggacagaaacaaagaattgcaattgcacgggcggtgctcaag
gacccgagaatactattgctagatgaggctacaagtgcacttgatgccgagtcagaatgt
gtgctgcaagaagcactcgagaggctaatgaggggccgcaccaccgtgcttgttgcccac
cgtntgtctacaattagaggggtggacagcatcggcgtggtgcaagacgggcgcattgtt
gagcacggcagccattcggagctagcgagccgccccgacggagcttatacaaggctgttg
cagctgcaaaatcatcacatatga
DBGET
integrated database retrieval system
