Malus domestica (apple): 103449638
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Entry
103449638 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103449638
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103449638
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103449638
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103449638
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103449638
Ubiquitin system [BR:
mdm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103449638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
GMP_PDE_delta
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103449638
NCBI-ProteinID:
XP_028946226
LinkDB
All DBs
Position
12:complement(5456415..5466977)
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AA seq
1118 aa
AA seq
DB search
MTMMTPAPLDQQQQEDEEMLVPNSDLVEGPQPMEVAQVEPASTVDSQPVEDPPTMKFTWT
IENFTRLNIKKHYSDMFVVGGYKWRILIFPKGNNVDYLSMYLDVADSGTLPYGWSRYAHF
SLAVVNHIHTKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDTVVVEAEVA
VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQYNDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPESDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAE
HLRIRLKKEQEEKEDKRKYKAQAHLYTIIKVARDEDLTEQIGRDIYFDLVDHDKVRNFRV
QKQMPFNLFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEETQSVGHLREVSN
KTHNAELKLFLEVEFGPDLRPIPPPDKTKEDILLFFKLYEPEKRELRFVGRFFVKSSSKP
AEILGKLNQLAGFTPDEEIELYEEIKFEPCIMCEHLDKKTSFRSSQIEDGDIICFQKSTP
LESEEECKYPDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKLHTYDDVVEKLARQIG
LEDPTKIRLTAHNCYSQQPKPQPIKFRGVEHLTDMLVHYNQSSDILYYEVLDIPLPELQG
LKNLKVAFHHAXKDEVVIHNIRLPKQSTVGDVINVLKTKVELSHPNAELRLLEVFYHKIY
KIFPHSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQVQNFGEP
FFLVIHEGETLAEVKERIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVSSRFQRRDV
YGAWEQYLGLEHSDNAPKRAYAVNQNRHTYEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctgcaccgttggatcagcagcagcaagaggacgaagagatgctt
gtgccgaactcggatttggtcgaaggtcctcagccaatggaagtagcccaagtggagcca
gctagtacagttgatagtcaaccagtggaggatcctccaacgatgaaattcacttggaca
attgagaactttactaggttgaacatcaagaagcactactctgacatgttcgtagtgggc
ggctataaatggcggatactaatatttcccaagggaaacaatgtggactacttgtcaatg
tatttggatgtggcagattccgggacattgccatatgggtggagtagatatgcacacttc
agcttggctgtagttaatcatatccataccaagtactcaataagaaaggacactcagcac
caattcaatgcaagagaaagtgactggggattcacttcattcatgcctcttggtgatctt
tatgatccgagtaggggatatctggtgaacgatacagttgtggttgaagctgaggttgct
gtccgtaaggttctagattactggtcatatgactcgaaaaaggaaactggttatgttggg
ctcaagaatcagggagcaacttgttatatgaattctcttctccagactttgtaccatata
ccgtacttcagaaaggccgtgtatcatatgccaacaactgagaatgacatgccttcagga
agcatccctttggcgctacaaagtttattctataagcttcaatacaatgacagcagtgtt
gcaaccaaagaattgaccaaatcctttggatgggatacatatgattcttttatgcaacat
gatgtgcaggaacttaatagagttctttgtgaaaagcttgaagataaaatgaagggaact
gttgtggagggtacaatacagcagttgtttgaaggacatcacatgaattacattgaatgc
atcaatgtggattacaaatctacaagaaaggaatcattttatgacctacagcttgatgtg
aaaggctgtcgggatgtttatgcttcttttgacaagtatgtggaagttgaacgtcttgag
ggtgacaataaataccatgccgaagaacatggtttgcaggatgctaagaagggtgttctg
tttattgacttccctcccgttcttcaacttcagctaaagcgatttgaatatgattttatg
cgggacactatggttaagataaatgatcgctatgaatttcctcttcaacttgaccttgat
agggagaatggaaaatatctatcacctgaatcagataagagtgttcgcaacctctacact
cttcatagtgtcttggtgcatagtggtggggtgcatggtggccattactatgctttcatc
agaccaaccctctcagaccagtggtacaaatttgatgatgaacgtgtgacaaaagaggat
gtgaagagggctttagaagagcagtacggtggtgaggaagagttgccacagaccaatcct
ggcttcaataatactcctttcaaatttacaaaatactcaaatgcatacatgcttgtgtat
atacgggacagtgataaggacaaaataatatgtaacgtggatgagaaagacatagccgaa
catctaaggataaggttgaagaaagaacaagaagagaaagaggacaaaaggaaatataag
gcacaagcacacctctacactattattaaggttgctcgagatgaggatctgacagaacaa
attggaagggatatttattttgacctagtggaccatgacaaagttcgtaatttccgtgtt
cagaaacaaatgccctttaatcttttcaaggaggaggttgcgaaagagtttggcatacca
gtgcagtttcagcgtttctggatttgggccaagagacaaaaccacacatatcgccccaac
cgaccattgacacctcaggaagaaacacaatcagttggacacttgagagaggtatcaaat
aaaacacacaatgcagagctaaagttgtttctggaagtagagtttgggccggatctacgt
cctattcctccgcctgacaaaaccaaggaagatatccttcttttctttaagctttatgag
cctgagaaacgagaactacgttttgttggtaggttttttgtgaagagttctagtaaacca
gcagagattttaggaaaattaaatcaactggctggttttacccctgatgaagaaattgag
ctttatgaggaaataaagtttgagccatgtatcatgtgcgaacatcttgacaagaagacc
tcatttcgatcgagtcagattgaagatggggatattatttgctttcagaagtctactcct
cttgaaagtgaagaagaatgtaaatatcctgatgttccttcatttttggaatacgtacac
aatcgccaggttgttcatttccgttctttggagaaacctaaggaggaggatttcagttta
gaattgtcaaagctacacacttacgatgatgtggtggagaaattggctcgccaaattggt
ttggaagatcccaccaaaatcagactcactgcacataactgctattctcagcaacctaag
ccccaaccaattaaatttcggggcgtagagcatttaactgatatgttagttcattacaat
caaagctctgatattttgtattatgaagtcttggacatccccctgccagaattgcaaggc
ctaaaaaatctaaaagttgcttttcatcatgctnacaaagatgaggtggtgattcacaat
attagattgcccaaacagagcactgtgggggatgtcattaatgtacttaaaacgaaggta
gagctgtctcatccaaatgcagaactccgactgcttgaggttttctatcacaagatttac
aagatcttcccacacagtgagaaaattgagaatataaatgaccagtactggactttgcgt
gcagaggagattccagaagaagagaaaaacttgggtccccatgatcgcttgattcatgtt
taccactttacaaaagacactgcacagaaccagatgcaagtacaaaattttggggaacct
ttcttcttggtcatccatgaaggtgaaactttagctgaagttaaagaacggatacaaaag
aaattgcaggtccccgatgaggagtttgccaagtggaagtttgctttcttgtcacttggt
cgtcctgagtacttgcaggattctgatgttgtgtccagccgttttcagagaagagatgtt
tatggtgcatgggagcagtaccttgggttggagcactctgataatgctcctaagagagcg
tatgcagtaaatcagaaccgtcacacgtacgagaagccagttaaaatatacaactaa
DBGET
integrated database retrieval system
