Malus domestica (apple): 103450485
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Entry
103450485 CDS
T03194
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103450485
Enzymes [BR:
mdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
103450485
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103450485
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
103450485
NCBI-ProteinID:
XP_017191691
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All DBs
Position
15:1633027..1636346
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AA seq
644 aa
AA seq
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MFLSSAPARLTLLALLSATTVYCFYKSRRLRRLKLSLNPNPGSSPRRGKLFFVSQTGTSE
ALARRLLDFLTLKGVAFDLVNPNNYEPEDLPKETLVLIVASTWDDGKPPPNAKFFSNWLA
ESAEDFRVGSLLLSNCKFAVFGVGSRAYGSTFNAVGKDLARRMRALGASEMFPIWEGDVD
GGDLDEVFDAWSGKVVRFLKGGAAENGGVLGNGVGDECEAESFDGSDEEDEEEEDGGESG
VVDLEDIAGKGPSRRNPVAATKTNGTVNGKKEMVTPVIRASLTKQGYKIIGSHSGVKICR
WTKSQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWKMDDP
LEIVNSAIDQHTKMIKQMKGVPGVTLERLTEGLSPRHCALSLVGEPIMYPEINALIDELH
RRRISTFLVTNAQFPEKIKMLNPITQLYVSVDAATKESLKAIDRPLFGDFWERFIDSLTS
LKDKQQRTVYRLTLVKGWNTKDIDAYYNIFGLGNPDFVEIKGVTYCGTSATSKLTMENVP
WHADVKAFSEALALKSNGEYEVACEHVHSCCVLLAKTSKFKIDGQWFTWIDYEKFHDLVA
SGKHFDSKDYMAPTPSWAVYGAEEGGFDPYQSRYKKERHHRTNQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctcctctgctcctgcgcggctcactctcctcgccctcctctccgccaccact
gtctactgtttctacaaatcccgccgcctccgacgcctcaagctatccctaaaccctaac
cctggctcttcgcctcgcagaggcaagctcttcttcgtctcccaaaccggaacctccgaa
gccctagctcgtcgcctgctcgattttctgacgttaaaaggcgtcgctttcgacctcgtc
aaccccaacaactacgagcccgaagacctcccgaaggaaaccctagttctgatcgtcgct
tcgacgtgggatgacgggaagccgcctccgaacgccaagttcttctccaattggctcgcc
gagagcgcggaggacttcagggtgggatcgctgctgctctccaattgcaaattcgccgtc
ttcggcgttgggagccgagcctacggctctacgttcaatgcggtggggaaggacttggcg
aggaggatgagggcgttgggcgcttctgagatgtttccgatttgggaaggggacgtggac
ggtggtgatttagacgaggtgtttgatgcttggagtgggaaggtggtgaggtttctgaag
ggtggtgcggcggaaaatggcggggttttgggtaatggggttggtgatgaatgtgaagct
gagagctttgatgggtcagacgaggaggatgaggaggaggaggacggtggggagtcaggt
gttgttgatcttgaggatattgcaggtaaaggaccttcaagaaggaacccagtggcggcg
acgaagacgaacgggacagtgaatggtaaaaaagagatggtcactccggttattcgagct
agcttaacgaagcaggggtataaaattattggttctcatagcggtgtcaaaatttgcaga
tggacaaagtcgcagcttcgaggccgtggaggttgctacaaacactcgttttatggcata
gaaagtcacaggtgcatggagacaacccctagtctggcatgtgccaacaaatgtgttttt
tgttggagacatcacacaaatcctgtcggaaagagttggcagtggaagatggatgatccg
ttagagattgttaattctgccatagaccagcacacgaaaatgatcaagcaaatgaaagga
gttcctggtgttacattggagcgattaacagagggtctctctcccaggcattgtgcctta
tcacttgttggtgaacccatcatgtatcctgagattaatgcactcatagatgagctgcat
cgaagacggatttctacttttctagtaacaaatgctcagtttcctgaaaagatcaaaatg
ctgaaccctatcacacagttatatgtaagtgtagatgctgcaactaaagagagtttgaag
gcgattgataggccactttttggggatttttgggagcgattcattgattccttgacttcc
ctcaaggacaaacagcaacgaactgtttatcgcctaactctggtgaagggctggaataca
aaagatattgatgcttattataacatttttggccttggcaatcctgattttgttgaaatc
aagggagttacatattgtggaacgtctgctacatcaaagttgacaatggagaatgtgccc
tggcatgctgatgtgaaagcattttcagaggccttagctttgaaaagtaacggggagtat
gaagtcgcatgcgagcatgtccactcgtgctgtgtcctcctggcaaaaactagcaagttc
aagattgatggccagtggttcacgtggattgactatgaaaagtttcacgatctggtggcc
tctggaaaacattttgacagtaaggattacatggctccaacaccttcatgggccgtttat
ggggcagaggaaggtggttttgatccgtatcagtctcgatacaagaaggagcgccatcac
agaacaaaccagtga
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