Malus domestica (apple): 103453329
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Entry
103453329 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: cryptochrome-1
KO
K12118
cryptochrome 1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103453329
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
103453329
NCBI-ProteinID:
XP_028954779
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSGGGCSVVWFRRDLRVEDXPALAAAVRAGGVVCVFIWAPEEEGPYYPGRVSRWWLKHSL
AHLDCSLKSLGTSLITKRSTDSVSSLLEVVVSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVNDVHDCPFTTFDAFWGRCLSMPYDPDAPLLPPKRIISGDV
SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLDYSYNRRKADGATT
SLLSPHLHFGEVSVRKAFHLARMKQVLWANESNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVINQNYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFEGYKCD
PNGEYVRKWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LSEMWQHEAASRAAVENGTEEGLGDSSESVPIAFPQDIQMEENNEPARNNPPGTRRYEDQ
MVPSITTSLVRAEEEETSLELQNLTEETRAEVPTDLIVNQEPRRDMLNQGVFQTTRNNAL
PPPNAAIGMQHAVEDSTAESSSSTRRERDGGVVPVWSPSSSSYSEQFGSEDNSIGTSSYL
QRHPQSHQIMNWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgcagtgttgtttggttcaggagagatctgagggttgaagatnac
ccagctttggcagctgcagtgagagcaggaggtgtggtgtgtgtcttcatctgggctcct
gaggaggaaggcccttattatcctggaagggtttcaagatggtggctaaaacacagcttg
gctcatcttgattgctccctgaaaagtcttggcacttctctcatcaccaaaagatccact
gacagtgtttcttctctccttgaagttgttgtttccactggtgccactcagcttttcttc
aaccacttatatgatcctatatcactggttagggatcaccgggcgaaggaggttctgact
gctcaaggtatagctgtgcgctcctttaatgcggatttgctctacgaaccatgggatgtt
aatgatgtccatgattgcccgttcactacctttgatgccttttggggaagatgtcttagc
atgccatatgacccggatgcgccacttctcccccctaagagaattatttcaggtgatgta
tcaaggtgcccttctgatacattggtttttgaagatgaatccgagaagggaagtaatgca
cttcttgctcgagcatggtcacctgggtggagtaatgctgataaggctctgaccacattt
ataaatggacccttacttgattattcttataaccgcagaaaggctgatggtgctacaaca
tcattactttctccccatttgcattttggggaggtgagtgtgagaaaagcatttcatctt
gctcgcatgaagcaggttctttgggccaatgaaagcaacaaggctggtgaagagagcgta
aacttgtttctgaagtctattggtcttcgggaatattcaagatacattagtttcaatcat
ccttacagtcatgaaagacctcttcttgggcacctaaaattcttcccctgggttataaat
cagaactactttaaggcatggaggcaaggtagaactggctatccattggtggatgctggc
atgagagagttgtgggctactggctggctgcatgatcgaatacgagtagttgtttctagt
ttcttcgtaaaggttctgcaacttccatggaggtggggaatgaagtatttctgggataca
ctattagatgctgaccttgaaagtgatgctcttggctggcagtatatatctggtactatc
cctgatggccgtgaatttgaccgcatagataatccccagtttgagggttacaagtgtgat
ccaaatggagaatatgtgcggaagtggcttcctgaacttgctaggctaccaactgaatgg
atacaccacccatggaatgcaccagaatctgtactccaagcagctggaattgaattagga
tcgaattaccctctccctattgtaggaatagatgcggcaaaaacccggttgcaagaagct
ttatcagagatgtggcagcacgaagctgcttcaagagctgctgttgaaaatgggactgaa
gaagggcttggagactcgtctgaatcagtgccaattgcctttcctcaagacatacaaatg
gaggaaaataatgaaccagcgaggaacaaccctcctggcactcgaaggtatgaggatcag
atggtcccaagcattactacttctttggttagagctgaagaggaagaaacttctttggaa
cttcaaaatttaacagaagaaaccagagcagaagtgcctacagatttaattgtgaatcag
gaaccaagaagagacatgttaaaccaaggggtttttcagactactcgtaacaatgctctt
ccaccacccaatgctgcaatagggatgcaacatgctgttgaagattcgactgcagaatct
tccagtagcactaggcgagagagggatggaggtgtagttccagtttggtctccttcaagt
tctagctactcagagcagtttgggagtgaagacaatagcattggaacaagttcgtacttg
cagagacatcctcagtctcaccaaataatgaattggaggcggctatctcaaacggggtaa
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