Monodelphis domestica (gray short-tailed opossum): 100010958
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Entry
100010958 CDS
T01031
Symbol
TYW1
Name
(RefSeq) tRNA-yW synthesizing protein 1 homolog
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdo03016
]
100010958 (TYW1)
Enzymes [BR:
mdo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
100010958 (TYW1)
Transfer RNA biogenesis [BR:
mdo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100010958 (TYW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
100010958
NCBI-ProteinID:
XP_007485746
Ensembl:
ENSMODG00000025697
UniProt:
F6TJ39
LinkDB
All DBs
Position
2:508572241..508822480
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AA seq
736 aa
AA seq
DB search
MDASLDVWDHFSMPLMSLWVNRFYLYLGLAFGISLCICVQVAIKKLGDRSTKESSLQKAP
LTPAANGPISRQKKEEVFVSGVKIFYGTQTGTAKGLATRLAKAVKALGFPAVVVNLKEYD
PDDRLGEEVTSKHLCVFLVATYTDGQPPESAEWFCRWLEEASNDFRFGKTYLKGMRYAVF
GLGNSLYDGNFNKVGKNIDRWLWMLSARRVMTCGEGDCNVVKSRHGSLEADFAAWQAHFL
SRLQDLSRSDHSKKKAACRHRQGHCKKGECKSKKKEGKNAGPEGSRQEAPEEEEQFETTS
EEESGPEEGRSRSPVVDVEDLGKMMDSMKKAKKEREQQDMEQDMSRSPGKNEAREKREMI
TPALREALSKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLAC
ANKCVFCWRHHTNPVGTEWRWKMDQPDMILQQAIDNHQNMINQFKGVPGVKAERLEEGLQ
VKHCALSLVGEPIMYPEINGFLKLLHQHRISSFLVTNAQFPTEIRNLEPVTQLYVSVDAS
TKDSLKKIDRPLFKDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVEELRAYAELVSLGE
PDFIEVKGVTYCGESSASNLTMANVPWHEEVIHFVEELVGLLPQYEVACEHEHSNCLLIA
HTKFKIDGDWWTWIDYDRFQELIQEYENSHGLKTFSAKDYVAKTPHWAVFGASERGFDPK
DTRFLRKNKAKDISGC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttccttggatgtgtgggaccacttctccatgcctttgatgtcattgtgggtt
aacaggttttatctatacttgggtcttgcctttggcattagcctgtgcatctgtgtccaa
gtggccatcaaaaaactcggcgacagatcaacaaaggaatcctccctccagaaggctccc
ctgactccagcagcaaacggtcccatctcacgtcagaagaaagaggaagtctttgtttct
ggagtgaagatcttctatggtacccagacaggcactgcaaagggattggcaacacgtctc
gccaaagcggtaaaggctctcggtttccctgcggtggtcgttaatttgaaagaatatgac
cctgatgatcgcctgggggaagaggtaaccagtaaacatctctgcgtcttcctggttgct
acgtacactgatggccagccaccagagagcgcagagtggttctgcagatggctggaggaa
gcgtccaatgacttcagattcggcaagacctatctgaagggcatgagatatgcggtgttt
ggattgggaaactcactttatgacggcaactttaacaaggtgggcaaaaacatcgataga
tggttgtggatgctcagtgccaggcgggtcatgacctgcggagagggagactgcaacgtg
gtgaagagccggcacgggagtctggaagctgattttgccgcttggcaggcccacttcctt
tcccggctgcaggacctgagccgcagtgaccatagcaagaagaaggcagcctgccgccac
cgccagggccactgtaagaaaggcgaatgcaaaagcaagaagaaggagggcaagaatgca
gggccagaggggtcaaggcaggaagccccagaggaggaagaacagtttgaaaccacgagt
gaggaggagtcgggccctgaagagggccggagcagaagcccagtggtggacgtggaggat
ttggggaagatgatggacagcatgaagaaggcgaagaaagaaagagagcagcaggacatg
gagcaggatatgtctcggagtcctgggaagaacgaagcccgtgaaaagcgagagatgatt
actccagctctgcgagaagctctttccaaacaaggttatcagttgattggaagccactct
ggagtgaagctgtgccgctggacaaagtccatgttgcgaggcagaggaggctgctacaaa
cacactttctacggcattgaaagccatcgctgcatggagaccaccccgagcctggcgtgt
gcaaacaagtgtgtcttctgctggaggcaccacaccaatccagtaggtaccgaatggcga
tggaagatggaccagcctgatatgatcttacagcaagccatcgacaatcaccagaacatg
atcaatcaatttaaaggagttcctggtgtgaaagccgaacgcttagaggaaggcctacag
gtgaaacattgtgccctgtcgcttgtaggagagcccatcatgtacccagaaatcaacggc
ttcttgaaactgctacatcagcatagaatttccagcttcctggtcaccaatgctcagttt
cctacagagatcaggaacctggagccagttacccagctgtatgtcagtgtggatgctagc
accaaagatagcctgaaaaaaatcgaccggccgctcttcaaggatttctggcagagattc
cttgacagtttaaaagctttgtctgaaaagcaacaacgcaccgtgtatcgcctgaccctg
gtgaaggcttggaacgtggaggaactccgagcctacgcggagctggtgtccctgggagag
ccggacttcatcgaggtgaagggtgtgacctactgtggagaaagctcggccagcaacctc
accatggccaatgtcccttggcacgaggaagtgatacactttgtggaagagcttgtgggt
ctgctccctcaatatgaagttgcctgtgagcacgaacactccaattgtctcctgattgct
cacaccaagttcaagattgatggagactggtggacctggattgattatgaccgattccag
gagctcatccaagagtatgaaaacagtcatggcttgaagaccttcagcgccaaggattat
gtggccaagactccccactgggcagtctttggggccagtgagcgaggttttgatcccaag
gacacaagattcctgaggaagaacaaagcgaaggacatctctggttgttga
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