KEGG   Monodelphis domestica (gray short-tailed opossum): 100011286
Entry
100011286         CDS       T01031                                 
Symbol
LARP1B
Name
(RefSeq) La ribonucleoprotein domain family member 1B
  KO
K18757  la-related protein 1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100011286 (LARP1B)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100011286 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 100011286
NCBI-ProteinID: XP_007495561
Ensembl: ENSMODG00000012300
UniProt: A0A5F8H019
LinkDB
Position
5:1431118..1505992
AA seq 1133 aa
MSAEGSVPPPEEPASVAELGLPPPRERELEGAGAAARGEPPPVPPAAPAPLGHSVPLAAV
AVKPLGLPLAHRPPEPGSPPGPEDYEDDGDGDDEDDGAAARERPRAPPPKENPWTKKPPP
PPPPSALLPPAVVTAAPSPAPGQTPAAAASSVLGPPQLLPLTEAAEPELSSTKIIKAGKP
KTKKTNKASDFSDITNWPTPSELVNNECQNVTNQPNKKPQNRKDKEEKIEKRINSESKEN
REAKLDGPGENVSEDEAQSNNQRKRGNLPYSVSCVRTSLSIPANKHKWVPLHLDDVRPDS
QERPGSRNSSRSQPEANKSAHNNRRNDSRSWRRDREKRDDQDEVSSVRSEGGNIRGCFRG
RGRGRGRGRGRGRGNPRMNFEYSYGYREQHGERTDQPFQPELNTSMMYYYDDGTGVQMYS
VDETLLKEYIKRQIEYYFSIENLERDFFLRRKMDEQGFLPISLIASFHRVQALTTNVNLI
LEALKDSTEVEIVDQKMRKKVEPEKWPIPGPPPRNVPQTDFSQLIDCPEFIPGKAFGSHT
ESAPSSPRMGSPLSPKKNIETSNLQTMSRGLSTSLPDLDSEPWIEVKKRHRPSPVKLKES
MGTAEEAANQPQQPSEEQEQEELDFLFDEEMEQIEGRKNTFTDWSDNDSDYEIDDQDLNK
ILIVTQTPPYMRKHPGGDRTGNHVSRAKITSELAKVINDGLYYYEQDLWMEEDENEHATM
KQEVENFKKLNLISKEQFENLAPEPPFEPNLDVPVGPSQSQQDLTDELAHKLFGISEVSS
TTMARSLPTAVPESPRVHPARTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKIPRKRKT
RHSTNPPLECHVGWVMDSRDHRPRTSSVSSSNASPSEGAPLVGSYGCTPHSLPKFQHPSH
ELLKENGFTQQVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQ
LAWDDAKENYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKKDYESGQLYGLEKFWAYL
KYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISEEFGRKRHSSASTGEESSRRRPPSNS
SSKPLNAAKPPATHQPQVPINSPRRNASQESIDNFPQNGTASESTDGGEMPEK
NT seq 3402 nt   +upstreamnt  +downstreamnt
atgtctgctgagggctccgtccccccgcccgaggagccggcctcggtcgccgagctgggc
ctgcccccgccgcgggagcgggagctggagggagccggggccgccgcccgcggggagccc
ccgccggtgccccccgccgctcccgcgcccctgggccacagcgtgcccctggcggccgtg
gccgtgaagccgctcggactgcccttggctcacaggcctccggagccggggagcccccca
gggcccgaggactacgaagacgacggtgacggcgacgacgaggacgacggggccgccgcg
agggagcgaccccgggcgccgccgcccaaggagaacccctggaccaagaagccgccgcca
ccgcctcccccttccgcgctgctgccgccggccgtggtgaccgccgccccgagcccggcc
ccaggccagactccggcagccgcagcctcctccgtgctgggcccgccgcagcttctgccc
ctgaccgaggccgcggagccagagctaagttccacaaaaattataaaagcaggaaaaccc
aagacaaagaaaactaacaaggctagtgatttcagtgacatcacaaattggccgacacca
agtgaattagtaaacaatgaatgccagaatgtcaccaatcaaccaaataagaaaccacaa
aacagaaaagacaaggaagagaagattgaaaagagaatcaacagtgaaagtaaagaaaac
cgggaagcgaagcttgatggccctggagagaatgtcagtgaggatgaggctcagtcaaat
aatcaaagaaagagaggaaacctgccatattctgtatcctgtgtgaggacttctttgtca
attccagctaataagcacaagtgggtaccacttcatttagatgatgtaagacctgatagc
caagaaagaccaggatcccggaacagctcaagatctcaaccagaagccaataagtcagca
cataacaaccgccgaaatgactcacgaagttggagacgtgatagagagaagagagatgat
caggatgaagtttccagtgtgagaagtgaaggtggtaatatacgaggttgttttagaggc
cgaggaagaggccgtggccgaggaagaggacgagggcgaggaaaccctcgaatgaacttt
gaatattcgtatggttatcgagaacaacatggagaaagaactgatcaaccatttcaacca
gaacttaacactagcatgatgtattactatgatgatggcacaggagttcagatgtattct
gtggacgaaacattgctcaaagaatacattaagcgacaaattgaatattacttcagtata
gaaaatttggaacgggacttctttcttaggaggaagatggatgaacaaggtttcttaccc
atttctctgattgccagtttccaccgtgttcaggccctgactacaaatgtcaatctcatt
ttagaggctttgaaagacagtaccgaagtggaaatagtggaccagaagatgaggaaaaag
gtggaacccgaaaaatggccaattcctggccctcctccacgtaatgtgccacaaactgac
ttctctcagctcatcgactgcccagagttcataccaggcaaagcctttggctcacatact
gagtctgccccaagttctccaagaatgggaagtccattgagtccaaagaaaaatattgaa
acaagtaaccttcaaacaatgtctagagggttgtctaccagcttgcctgatctggactcg
gagccttggatagaagtaaaaaagaggcatcgtccgtccccagttaaattaaaggagtcg
atgggcacagctgaagaagcggcaaatcagccccagcagccttcagaggaacaagaacaa
gaggaactggattttttgtttgatgaagaaatggaacagatagaaggacgaaagaacaca
tttactgattggtctgacaatgattccgattatgaaatcgatgaccaggatttaaataag
atcttgattgtgactcagaccccaccttatatgcggaaacatcctgggggagatcgtaca
ggcaaccatgtgtctcgtgccaaaattacatcggaacttgctaaagtcatcaatgatggc
ttgtattattatgaacaagatttgtggatggaggaagacgagaacgaacatgcaacaatg
aagcaagaagttgaaaactttaagaagctaaatctaattagtaaagagcaatttgagaat
ctagcacctgaacctccctttgagccaaatctagacgttcctgtaggaccttcgcagtct
cagcaagacttgactgatgaactggctcataaattatttggtatttcagaagtatcttca
acaacaatggctcgttccttgccaactgcagttccagaatctccaagagtccatcctgca
agaacacccaaaacaccccgcacacccaggttgcaagatccaaacaaaacgccaagattc
tatcccgttgtgaaggaaccgaaagccatcgatgtgaagattccaagaaagagaaaaaca
cggcatagtacaaacccccctctagagtgtcatgttggttgggtaatggactccagagat
cacaggccaagaacatcctctgtcagtagttccaatgcttccccttcagaaggtgcacca
ctggtaggaagctatggatgtacccctcattctctcccaaagttccagcatccctctcat
gaacttttgaaggaaaacggctttacacaacaagtatatcataaatatcgccgaaggtgc
ctaaatgagagaaaacgcttgggaattggccagtcccaagaaatgaataccctctttcgt
ttctggtccttttttctcagagaccacttcaataagaaaatgtacgaggaatttagacaa
cttgcttgggatgatgcaaaagaaaactacagatatggactagaatgtctgttcaggttt
tatagttacggactggaaaaaaaattcagacaagagatcttcaaggatttccaagaagaa
accaaaaaagattatgaatcaggtcagctgtatggattagaaaagttttgggcttatcta
aaatattcccaatccaagactcagtctatcgacccaaaacttcaggaatacctctgtagt
tttaagaggttagaagacttccgagttgatcctcctattagtgaggaatttgggaggaaa
agacattcttcagcttctactggtgaggaaagtagtcgccgcagacctccatcgaattct
tcttcaaagccactcaatgctgccaaacctcctgctacccatcagcctcaggtcccaata
aactctccccgaaggaatgcttcacaggagtccattgacaatttcccccagaacggcact
gcctccgaatcaacagacggcggcgagatgcccgagaaatag

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