Monodelphis domestica (gray short-tailed opossum): 100011617
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Entry
100011617 CDS
T01031
Symbol
BDP1
Name
(RefSeq) B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
KO
K15198
transcription factor TFIIIB component B''
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100011617 (BDP1)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100011617 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
100011617
NCBI-ProteinID:
XP_007486561
Ensembl:
ENSMODG00000001460
UniProt:
F7APT5
LinkDB
All DBs
Position
3:45071637..45177412
Genome browser
AA seq
2502 aa
AA seq
DB search
MFRRARLSVKPNVRPGAGGRGPAAPEPPRGQQVPREPEPAAPLPPVPAPEAAAILPGPPP
DPGLAEPLEDEVVECGDEKPAEDDVGESSKSSPTSLQRRKQISTASSLTKSSDPVQSTPQ
SSCTVQQEALQPSPLPGKEKQQCSDRYRMLKAQKLREMLREEMTKRRKQWKNKYAGNENQ
MPPDRSKMTMRDLIYYLPDSNPMKSSLEQEAKTEKSTPVQTKEQEEKNIPDAEGDDEEME
EENNDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFR
KNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKANGWRIDKA
FQEKRPFDFNFFARLLEKVLAEEEKRKQKTVKNQNAKEKKSSRSRKKQNVNRVASGEVND
QPDDTLNTRTSDTEGTEIDAEIVEKENDQSLNVAGQTVLESVVNRKKRKRKKKDDTDEQE
AENLSKGSADLSETSKGEKPNKKKCQLLVAVINKDECNKDLEVSNFENVGEIPCISLSEN
SENDTEHISSARNQNDNAAAIAAGESSGPEASDLSSSKAKSKELTQIIQIDSNIEGKMSD
TNVKLLEAEKADTSNLQVRGHPLKPKPNLLRTFGKKAEATKSKIEAESKNSFPELPGNVK
KNLMEKDECYPPVSTGKEVKETENQEPEDEFHEKHGLQETEKASTFRPPRLMRGQMQKPK
PHIGKPNDQKEVVAAEIKNGTKGEKYERESSVPQGTQIQTEDQSFNKLDVGNSRPQHEKE
DVVSQLSKTDEPEAVMENQSLQDGNKLSTFKEGPVRRARFQKPRPNVGRATGRSEISPRE
KASKEISVTGKVEAGLLQTDGEFNSLPLPNNINCGLPSLVEEFEKEASSQKGISSPVIPL
KPSCISPSEECEKDKEIQPTADLEQVPDVSKSKCPQDEKLSVAKKPPFVRSRFKRPRPNL
RRAIEKGGAPGAEKCELLKKLETEKLEIMIQHDDRNQDAISSPQDHASSLQDKVSPFCQD
DSFPPQVTSFSQVDASSPKDDSVPLQDDCSSPQVTASFPQVDASFPKDDSIPLQDDSFPP
QVTASCPQVDASFPKDNYTLAQVADSSPQDPASPPHLDTSPPQDSASPPQVNAFPLQDEV
SSLQDDTSSLQEDAYPLQVIASSLQVDASSSQDNASPLQVNIFPAQVCTSPHRLAVSPFQ
VEASFQDNASPPRVSVFPTQICASPQLAASPLQVIASPLQVDVPASQDNASPPQVSVFPA
QVYASTVQLAASPLQVITSSYQDDVSTPQDNAFPPQMTASPAQDDASSLQNDASLLQVVV
SPLQDSVPTTQVDASPTQVITSPAEDDESPVQVATCQSQADAFPIADVNHLCQNDTTESS
QKSAINHEDPGPEKGVEDLLLKEQTPKKLLDSLNCELEEPFIGAQENDFAVSTGIQNSQQ
EIKKNDIQPLRMRGRLKRPRPNISKVERRGSRLAGKCVVEERAKEEGIILHKNESESESF
TLPSSKIESEVVPFEVCESKNQGVSEENLQVSRTEVLKEQISKEKYKLHTVSPAQFRRCR
FQTVKPNLERACRKKEEPDTEKIVPNKNDTRRAEDKLLQQEDSDTHQSLKDKTELLSSLG
IAQRKEHGDSRDFALPKEYSQSEKLDSFDRQLECSCDSGPGATLSSVGVEEQFPNKSTRH
TQQSKEPSCLKNTLGRRIVTSSISECEMDNSDRRIHRKSKQNFSKGRGSKRVRARISRKE
PRTSKAVLVTLRASQEEDEEDLEDLESEYEEENYHLAPEEVNKAPVFVPIGLRSPEPVSA
QIEETMEELEISVNVPDVPCITIADHLLPNVNMSNEEVNQKENLNASVELATIEYSEEKT
GNSDGSTEAAIALLTMGGQMLQSEMDTAGIVCVLPEDDLRSNTSNPETFDHRVVLEQQVI
SSPGPSTLLTSLDENKITLEEQNTGKEVNIPGQIKENSIPSSDQSSKKTSSLRTRSRFPK
PKPNLSKILGKDRHVRQKLTSFPTTVDQQVDIQCETECSASKGAELEDINLESKIKTDIQ
TGKLTDLCSIECTNDGKEVNEFQSEENQDKESQESQMVSASPLATTSSHDSNYNLAEMPI
GEFLSSGNDKHNLLMTHFAQECRLNTATEVEQQNVISPDDPTVNQVDSEHRGEEEEQTVI
LTLVEIPTDSEEQFAGTSDLLLIGPLLPAPILVKSTNKEERGDLSLNFPFGEDVTQLSNY
GISVQPSPEKSPTDMDLTLSKTLGCSLEKSNSLIAPTEPSVSTSGEDCQTIISEVCSDEL
ISMHKNAAGEPYEKQTVVPILGSTCTIAEPQETQKEPSETSVQGSGTVSCVEVTCTEKEE
DAPHLPQDEVVISDKHERTGATYQLEQSSKPSSLLSRPGRRPLGFLSLICSKNNLESEEA
TPMNNQKRLKPLIPISRRNIKRPVLLNEGKRKKQDSCPLPPASAETHSEAGTVSSSTPQV
SCDQSVEEESCKSDQKMETEEEPTKVAEYFFSDIFMEVDETQ
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgttccggagggcgcgactgagcgtgaagcccaacgtgagacccggggctggcggcagg
ggtccggccgctcccgagccgccgcgaggccagcaggttccccgagagcctgagccggcc
gccccgttgcctccggtgccggcgcccgaagctgctgcgatcctgccgggtcccccgccg
gatcctgggttagccgagcccctggaggatgaggtggtcgagtgtggtgatgaaaagcct
gctgaggatgatgttggagagtccagtaaatcttcaccaacttctttacaaagaagaaag
caaatatccactgcatcgagtctcactaaatctagtgaccctgttcagtcaactccccag
tcttcgtgcactgttcaacaggaagcactgcaaccaagtcctcttccaggaaaagaaaaa
caacagtgttcagaccgttataggatgcttaaagctcaaaagctaagagaaatgctaaga
gaggaaatgacaaaaagaaggaagcaatggaaaaacaaatatgctggaaatgaaaaccaa
atgccaccagatcgttctaaaatgactatgagagacttgatatattacctgccggacagc
aatcctatgaaatcttctttggaacaggaagcaaaaactgaaaaatctacgccagtgcaa
actaaagaacaggaagaaaaaaatattcctgatgctgaaggcgatgatgaagaaatggaa
gaagagaacaatgacggccctttacttgttcctcgtgtgaaagtggcagaggatggctct
attattctggatgaagaaagtttaactgtagaagttttaaggacaaaaggcccttgtgtt
gttgaagaaaatgatcccatttttgaaagaggttctacaactacatattccagctttagg
aaaaattattactctaaaccatggtctaataaagaaacagacatgttctttttagccatc
agcatggtaggaactgacttttccatgattggccaactctttcctcacagagcaagaata
gaaattaagaataaatttaaacgtgaggaaaaagcaaatgggtggagaattgacaaggca
tttcaagagaagcgcccctttgacttcaatttctttgctcgtttgcttgagaaggtcctt
gcagaagaggaaaaaagaaaacagaaaactgttaaaaatcaaaatgcaaaagagaagaag
tcttctagatctcggaaaaaacaaaatgtaaatagagttgccagtggtgaagtgaatgat
cagccagatgatactctgaatactagaacttcagacacagaaggaactgaaatagatgcc
gagattgttgagaaagaaaatgaccaatctttgaatgtagcaggacagactgtattagag
tctgttgtaaatagaaagaaacggaaaaggaagaaaaaggatgacactgatgagcaggaa
gcagaaaatctttcaaaaggttctgctgacctttcagaaacttctaaaggagaaaagcca
aataagaagaaatgtcagcttttggtagctgtaataaataaagatgaatgcaataaagac
ttggaagtttccaattttgaaaatgtaggcgagattccttgcatatcattgagtgaaaac
agtgagaatgacaccgaacacatctcttcagcgagaaatcaaaatgataatgctgcagca
atagctgcaggtgaatcctcaggaccagaagcttcagatttgtcttcttcaaaagccaaa
agtaaagaactgacacagatcattcaaattgacagcaacatagaaggaaaaatgagtgat
actaatgttaaacttctggaagctgaaaaagctgataccagtaacctccaagtgaggggg
catcctctgaagcctaaacccaacttgttaagaacatttggaaagaaagcagaagctacc
aaaagtaaaattgaagcagagagcaaaaattcatttccagaacttccaggaaatgttaaa
aagaatctcatggaaaaagatgaatgttaccctcctgttagtactggaaaggaagtcaaa
gagacagagaatcaagaacctgaagatgaatttcatgaaaaacatggtttacaagaaact
gaaaaggcgagtactttcaggccaccaaggttaatgaggggtcagatgcagaaaccaaag
ccacatatagggaaaccaaatgaccagaaggaagtagtagcagcagaaatcaagaatgga
actaaaggagagaagtatgaaagggaatccagtgtcccccaaggtacccaaatacaaaca
gaagatcagtcattcaacaagcttgatgttgggaacagtagaccacagcatgaaaaagag
gatgtagtttctcagttatccaagacagatgaaccagaagctgttatggaaaatcagagt
cttcaagatggcaataaattaagtacattcaaagaagggcctgtaaggagagcacgattt
cagaagccaagacccaatgtaggaagagcaactggaagaagtgaaattagcccacgggaa
aaggcatccaaggaaataagtgtcactggaaaagtagaggcaggtttgcttcaaactgat
ggtgaattcaattctcttcctctccccaataacataaactgtggcttgccatcccttgtt
gaagaatttgaaaaagaagcatcttctcaaaagggaatctcaagtccagtaattcctctg
aagccttcttgcatttctccttcagaagaatgtgaaaaagataaggaaatacaacccaca
gctgatctggagcaagttccagatgttagcaaaagcaaatgtcctcaagatgaaaagctt
tctgtagctaaaaaacctccttttgtgagaagtcgattcaagagaccaagaccaaactta
agaagagcaattgaaaaaggtggagctccaggagcagaaaaatgtgagttgttgaagaaa
ttggaaacagaaaaattggagattatgatacaacatgatgatcgtaaccaggacgccatc
tcctcccctcaagatcatgcctcttcccttcaagacaaagtctctcccttctgtcaagat
gattctttcccacctcaagtcactagtttctcccaagttgatgcttcttcccctaaagat
gattctgttccccttcaagatgattgctcctcacctcaagtcactgcctcatttccccaa
gttgatgcctccttccctaaagatgattccattcctcttcaagatgattccttcccacct
caagtcactgcctcctgcccccaagttgatgcttcttttcctaaagataattataccctt
gctcaagttgctgactcctcccctcaagatcctgcctcaccccctcacctggatacctca
ccccctcaagacagtgcttctccccctcaagtcaatgcctttcctcttcaagatgaagtt
tcttctcttcaagatgatacttcttcccttcaagaagatgcctacccccttcaagtcatt
gcctcttcccttcaagttgatgcttcttcttctcaagacaatgcctcacccctgcaagtc
aatatttttcctgctcaagtctgtacttccccccatcgattggctgtttccccattccaa
gttgaagcctcctttcaagataatgcctcaccccctcgagtcagtgtttttcctactcaa
atctgtgcttccccccaattggctgcctccccccttcaagtcattgcttctccccttcaa
gttgatgtgcctgcctctcaagacaatgcctcaccccctcaagttagtgtttttcctgct
caagtctatgcttccactgttcaactggctgcctccccccttcaggttattacctcctcc
tatcaagatgatgtctctacacctcaagataatgcttttccccctcaaatgactgcttcc
cctgcccaagatgatgcttcttcccttcaaaatgatgcctctctccttcaagttgttgtc
tcaccccttcaagacagtgtccctactactcaagttgatgcttctcccactcaagtcatt
acctcccctgcagaagatgatgagtcccctgttcaggttgctacctgccaatctcaagct
gatgccttccccattgcagatgtcaaccatctgtgtcagaatgatacaactgaaagttct
caaaagtctgcaattaatcatgaagatccaggtccagagaagggggtagaagacctgctt
ttaaaagaacagactccaaagaagcttttagattcattgaactgtgaactcgaagaaccc
tttataggagcacaagaaaatgattttgctgtttctacaggcatccagaattcccaacaa
gaaattaagaaaaatgatattcagccactgcgaatgaggggccgattgaagagacctagg
ccaaacataagcaaagtggaacggagaggatctaggttagcaggaaaatgtgttgttgaa
gaaagggctaaggaagaaggaataatattgcataagaatgaatctgaaagtgaatccttc
acccttccaagttctaaaattgaaagtgaagttgtaccttttgaagtgtgtgaaagtaag
aatcaaggagtttcagaagaaaatctgcaagttagcagaactgaagttttaaaagaacag
ataagcaaagaaaaatataaacttcatactgtcagcccagcacagtttaggaggtgccga
ttccaaacagttaagccaaatttggagagggcatgcagaaagaaagaagaacctgatact
gaaaagattgtgccaaataaaaatgatacaagaagagcagaagataagttgttgcagcaa
gaagactctgatactcaccagtctctaaaagataaaacagagctactgtcatccctgggg
atcgcacaaagaaaagaacatggggattctagagactttgccttgcccaaagaatatagt
caatcagaaaaattggattcctttgacaggcagctggaatgttcttgtgacagtggtcca
ggagctactctctcatctgtaggtgttgaagagcaatttccaaataaatcaacaaggcat
acacaacaatcaaaagaaccaagttgtctaaaaaatactctgggtcgaaggatagttact
tcctcaatctctgaatgtgagatggataatagtgataggagaatccatcggaagtctaag
caaaatttcagtaaaggacgtgggtccaaacgtgtccgtgccaggatttccaggaaggaa
cctcggacctcaaaggcagtattagtaacactacgagcatctcaggaagaggatgaagag
gatctagaagaccttgagtccgaatatgaggaagaaaactaccaccttgcaccagaagaa
gtcaacaaagcaccagtgtttgtaccaattggactccgctcaccagaacctgtttctgcc
caaattgaggaaactatggaagagcttgaaatctctgtgaatgtcccagatgtaccatgt
attaccattgctgaccaccttcttcctaatgtaaatatgtcaaatgaagaagtgaatcag
aaagaaaatctgaatgcctcagttgaacttgctacaattgaatattctgaagaaaaaaca
ggtaacagtgatggaagcacagaagctgccatagctttacttacaatgggaggtcaaatg
ttgcagtcagaaatggatactgcaggaatagtgtgtgtgcttcctgaagatgacttaagg
agcaatacttctaacccagagacctttgaccacagagtagttcttgaacaacaagtaatt
tcttcaccaggccctagtacattgcttacatcactggatgaaaataagattacattagaa
gagcaaaatactggaaaagaagtgaatatacctgggcaaataaaggaaaattctatacct
tccagtgaccagtcttctaaaaagacaagttcattgagaacaagaagcagatttcctaag
cctaagccaaaccttagtaaaatccttggaaaagatagacatgttcgtcagaaacttact
agttttcctacaactgtggatcaacaggttgacatccagtgtgaaacagaatgcagtgct
tccaaaggagcagagttggaagatataaacctagaatcaaagattaagactgacatacag
actggcaagttgacagatctatgcagcattgaatgcactaatgatggcaaagaagtgaac
gaatttcaaagtgaagaaaaccaggacaaagaatctcaagagtctcaaatggtatctgct
tctccattagccactaccagttcccatgatagcaactataatctcgctgagatgcctata
ggagaatttctgagcagtggtaatgataagcacaacttattaatgactcattttgcacag
gagtgcagattgaatactgctacagaagttgagcagcagaatgtaatcagcccagatgac
ccaacagtgaatcaggttgatagtgaacatcgaggcgaagaggaggagcagacagtcatt
ttgactctggtagaaattccaacagactcagaagaacaatttgctggtacatctgattta
ttattaattggccctctactgccagcacccatattggtcaaatcaacaaataaagaagaa
aggggagacctgagcttgaatttcccatttggtgaagatgtcacacaattatctaattat
ggtattagtgtccagccatctcctgaaaagtctccaactgatatggatctgacattgagt
aagacacttggttgtagccttgaaaaaagcaatagccttattgctcctacagaacctagt
gtttctacttcgggagaagattgtcagacaatcatctctgaggtgtgttcagatgaatta
ataagtatgcacaagaatgctgcaggagagccttatgaaaagcagacagttgtgcctatc
ttgggaagcacatgtacaattgcagagcctcaagagacacagaaagagccgtcagaaacc
agtgttcagggttcaggaactgtgtcttgcgttgaggtgacatgtactgagaaagaagag
gatgctcctcatttacctcaggatgaagttgtaatctctgacaagcatgaaagaactggg
gctacttatcaattagaacagagtagcaagccatcctctttgttatccagacctggccga
agacccctgggatttttgtctttgatatgttcaaagaataatttagaatctgaagaagcc
acaccaatgaataatcaaaaacgtttgaaacctttaatacctatatcaagacgtaatatt
aaaagaccagtgctcctaaatgaaggcaagagaaaaaagcaagattcttgtccccttcca
cctgcaagtgctgaaactcattctgaagctggtactgttagcagctcaacacctcaggtt
tcctgtgatcagtcagttgaggaagaaagttgtaaaagtgaccaaaagatggaaactgaa
gaggaaccaaccaaagttgctgaatatttttttagtgatatttttatggaagtggatgaa
acacagtaa
DBGET
integrated database retrieval system
