Monodelphis domestica (gray short-tailed opossum): 100013342
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Entry
100013342 CDS
T01031
Symbol
FIP1L1
Name
(RefSeq) factor interacting with PAPOLA and CPSF1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100013342 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100013342 (FIP1L1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100013342 (FIP1L1)
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Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100013342
NCBI-ProteinID:
XP_001363548
UniProt:
F7E5Y1
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Position
5:complement(172486640..172581339)
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AA seq
583 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGISK
PKVTETEDDSESDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGAAGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLELIPNKITAEDYTMEVTPGAEIQDGRYNLFKVQQGRTGNAEKETVLQSAKAEFTSP
PSLFKTGLPPSRNSASSQSQTSSASRKANSGIGKWQDRYGRAESPDLRRLSGTIDVIGQT
ITISRVEGRRRANENSNIQVLSERSAAEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPT
VSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAF
PHLPGSAPSWPSLVDTTKQWDYYARREKDRERERERDRERDRDRDRERERTRERERERDH
SPTPSVFNSDEERYRYREYTERGYESHRASREKEERHRERRHREKEETRHKSSRSNSRRR
HESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggggaggtggagcgcctggtgtcggagctgagcggcgggaccggtggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaagaccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaaactgcagaaaatgggatatcaaaa
ccgaaggtgactgagaccgaagatgatagtgagagtgacagtgatgatgatgaagatgat
gttcatgtcactattggtgatattaaaactggagcaccacagtatgggagctatggaaca
gcacctgtaaatcttaatatcaagacaggaggaagagtttatggtgcggcaggaacaaag
gtcaaaggtgtagacctagatgcacctggaagcattaatggagttccactattggaagta
gatttggactcttttgaagataaaccatggcggaaaccaggtgctgatctctctgattac
tttaattatggttttaatgaagatacatggaaagcttactgtgaaaagcaaaagaggata
cgaatgggacttgaattaataccaaataaaattacggccgaagactatactatggaagtt
acaccaggtgcagagatccaagatggcagatacaatctttttaaggtacagcagggcaga
actgggaatgcagagaaggaaacagtgctacagtctgccaaagctgaatttacatctcct
ccttctctcttcaaaacaggacttcctccaagcagaaacagcgcctcttctcagtctcag
acaagttctgcctccagaaaagccaattcaggcatcgggaagtggcaagatcgatatggg
agggccgaatcacctgacttaaggagattatctggcacaatagatgtaattggtcagact
atcaccatcagccgagtagaaggaagacggcgggcaaatgaaaatagcaatatccaggtt
ctttccgaaagatctgctgctgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctccaactcatctcccaccacctccatttcttcctcctcctccaact
gtcagcactgctccacctctgattccacccccaggtattccaataactgtaccacctcca
ggttttcctcctcctccaggagctcctcctccatctcttataccaacaatagaaagtggg
cattcttctggatatgatagtcgttctgctcgcgcatttccatatggcaatgttgccttt
cctcatcttcctggttctgctccttcatggcctagtcttgttgacactaccaagcagtgg
gactactatgccaggagagagaaagacagagaaagagagagagaacgagaccgtgagaga
gaccgcgatcgggatcgggaaagagaacgtaccagagagagagagagggaacgtgatcac
agcccaacaccaagcgttttcaacagtgatgaggaacgatacagatacagagaatatacg
gaaagaggctatgagagtcatagagcaagtcgagaaaaagaagaacgacacagagaaaga
agacacagagaaaaagaggaaacaagacacaagtcatctcgaagcaatagcagaagacgc
catgaaagtgaagaaggagacagtcacaggagacataaacacaaaaaatcaaaaagaagc
aaagaaggaaaagaagctggcagtgaacctgccccagagcaggagagcactgaggctgct
cctgctgaatag
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