Monodelphis domestica (gray short-tailed opossum): 100013429
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Entry
100013429 CDS
T01031
Symbol
RBBP6
Name
(RefSeq) RB binding protein 6, ubiquitin ligase
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100013429 (RBBP6)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100013429 (RBBP6)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
U-box type E3
100013429 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100013429
NCBI-ProteinID:
XP_003341718
Ensembl:
ENSMODG00000016318
UniProt:
F7A5F7
LinkDB
All DBs
Position
6:145029909..145068141
Genome browser
AA seq
1774 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIPPPPPPIPPPRPLIQRNLQPLMRP
PISRQQDPLMIPVTSASTHAATSISSSMTPNQSSLSSAVPINQPTTPAPVPDITATVSIS
VHSEKPDGPFRDPDNKIIPAAALVSDHPKASSSIAISALMEEKGYQVPVLGTPSLLGQSL
LHGQLIPTTGPVRINAARSAGGRPGWEPSINRGRHHGERSQRTQGPSLPATPVFVPVPPP
PLYPPPPHTLPLPPGVPPPQFPPQFPPGQPPPAGYSVPPPGFPPAPTNLSTPWVSTAVQT
AHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRS
FSRSKSPYSGSSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSR
NYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPPVFRGQSPNKRNVPQGETEREYFNRYREV
PPPYDIKAYYGRNVDFRDPFEKERYREWERNYREWYEKYYKGYAAGAQPRPPANRENFSP
ERFGPLGNRRENSPFARGRREDYSGVQGHRSRNIGSNYPEKLSARDGHTMKDSAKSKEKE
SENPPGDGKGNKHKKHRKRRKGEENEGFPNTELLESSRKQREPVGGEDIKTDSLFILPSR
DDATPVRDEPMEAESITFKPLSEKEKKEKDKPKAKGDKTKRKNEGTTGSKKESTAKPVKA
SQEKTDIEREKSPRSEPPSKKAKEEVPKTESTKSSSQKDEKTISTPRKTHPKVTKEHQET
KSIKEEKVKKEYSKDAKQEKLANKEEKSKKTNEKSKPADAKPEKRKRKAEEKGVDKEHEI
LSLKSSKPEVAEMMKPSPKRKIEPDAEKTDRTPEKDKAVLTAPAKKIKLNRETGKKIGSG
ENLPNAKELTEKLEPTSSKIKQEKVKGKVRRKVTATEGSSSTLVDYTSTSSTGGSPVRKC
EEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQALSSV
GKPASVIKNVSTKPSNPVKLIEKESEPSEKIQKPTKEVSHEGVQHEAKSSKTCSSSDKGK
TKDRDHSVSDKENSEKRKSSIQTEKDTTVDRISEQGNFKSLSQSSKDSRTSDKHDSGRGS
SSKDFTPNRDKKIDYDNRDHSGSKRRDERSDLTRRKDSPSRTKLESSLGQKNKLKDERTD
LPKKGVGESKRGNSSPSKDRRPYDHKAAHDSKRSNDDNKSVDKNPVKEREKHISETKNNK
EKELSGNKLFCKHSSPDTQIEKEHVTTGQNDKTVVKPKPQLSHSSRLSSDLTRETDEAAF
VPDYNESDSESNVSAKEEETLGKNPKELKEKVAEKAKETLETTVVGQIGIRSQSQSSPSV
SRSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHTGTELELE
KSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctccaaactcaactatgataccgttacctttgat
ggactccacatctccctgtgtgatttgaagaagcaaatcatggggagagagaaactcaag
gctgctgactgcgatctacagatcaccaatgcacaaacgaaagaagaatacacagatgat
aatgccctgattcccaagaattcatcggttattgtaagaagaattcctattggaggtgtt
aaatctacgagcaagacatatgttataagtcgaactgaaccagtgagtggaacctcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcacagtctggccac
gaatatgatccaatcaattacatgaagaaacctctgggtccacctccaccatcttatacc
tgtttccggtgtggtaaacctggccattacataaagaattgcccaacaaatggggacaaa
aactttgaatcagttcccagaattaaaaagagtactggaattcctagaagttttatgatg
gaggtgaaagatcctaatatgaaaggtgccatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaggcatatgccatagggaagaaagaaaaaccacctttcctacca
gaggaaccatcctcttcatcagaagaggatgaccctattccagatgaattgttatgtcta
atctgcaaagatataatgactgatgcagttgtcataccttgctgtggaaacagttattgt
gatgaatgtataagaacagcattgctagaatcagatgaacatacatgtccaacttgtcat
cagaatgatgtatctcctgatgctttaattgccaacaaatttttgcgccaggctgttaat
aacttcaaaaatgaaactggttatactaaaaggcttcggaagcaaatacctccaccccca
cctccaattccacctccaagaccactgattcagcggaacctacaaccactgatgagacct
ccaatttcaagacaacaggaccctttgatgattccagtgacatctgcatctactcatgct
gctacttctatatcatcatccatgactcctaatcagtcttccctatcctctgctgtacct
ataaatcaacctactactccagcaccagttcctgatataactgccacagtgtccatatct
gtccattcagaaaaaccagatgggcctttccgtgatcctgataataaaattatacctgct
gcagctttggtatcagatcatcctaaagcttcttcatcaatagcaattagtgcactaatg
gaagaaaagggctatcaggtacctgtacttggaaccccttctttgcttgggcagtccctt
ttgcatggacagttgatacctacaactggtccagtaagaataaatgctgctcgttctgct
ggtggtagacctggttgggaaccaagcataaatcgaggacgacatcatggtgaacgctca
cagagaactcaaggcccatcactaccagcgacaccagtctttgtacctgtgccaccacct
cctttgtatccaccacctccccacacacttcctctccctccaggtgttccaccacctcag
ttccctcctcaatttccacctgggcaaccaccacctgctggctacagtgtccctcctcca
ggtttccctccagcacctacaaatttatcaacaccttgggtatcaacagcagtacaaaca
gctcattcaaatactatcccaacaacacaagctccacccttatccagggaagagttctac
agagagcaaagacgactaaaagaggaggaaaagaaaaagtccaaactagatgagtttaca
aatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctca
ttttcaaggtctaaatcaccatatagtggctcctcctattcaagaagttcatatacctat
tctaaatcaagatctggttcctcacgttcccgttcctattctcgatcctttagtcgttca
cactctcgttcttattcacgatcccctccatatccccgaagaggcagagggaaaagtcga
aattatcgttcaagatccagatctcatggatatcaccgctccagatctaggtcaccccca
tatcgacgatatcattcacgatcaagatcacctccagtttttaggggacaatctcctaat
aaacgaaatgtacctcaaggagaaacagaacgtgaatattttaatagataccgagaagtc
ccaccaccttatgatataaaagcttactatggtaggaatgttgactttagagacccattt
gaaaaagaacgttacagagaatgggaaagaaattacagagagtggtatgaaaaatattac
aagggttatgctgctggagcacaacctagacctccagcaaatagggagaacttttctcca
gagagatttggaccactgggcaacagaagagagaattctccctttgctcgaggtcgcaga
gaagattattctggtgtacaaggtcaccgcagtcgcaacataggtagcaattacccagaa
aagctttcagcaagagatggtcacaccatgaaggatagtgccaagtcaaaagagaaggag
agtgaaaatccaccaggagatggaaagggaaacaaacataagaaacaccgaaagagaaga
aagggagaagaaaatgaaggatttcctaacacagagttgctagagagttctagaaaacaa
agagaacctgtaggtggggaagatattaaaacagactccttgttcattctccccagtaga
gatgatgccacccctgttagagatgaaccaatggaggcagagtcaataacttttaaacct
ttatcagaaaaggagaagaaagaaaaagacaaaccaaaagcaaaaggcgacaagactaaa
cgtaaaaatgaagggactactggttcaaaaaaagagagcactgcaaaacctgttaaagca
tcccaggagaaaacagatatagaacgtgaaaaatctccaagatctgaaccaccatccaaa
aaagccaaagaggaggtgccaaagacagaaagtactaaatcctcctcccagaaagatgaa
aagaccattagtacacccagaaaaactcaccctaaggtgacgaaagaacatcaagaaaca
aaatccatcaaggaggaaaaggttaaaaaagaatattcaaaagatgccaaacaagaaaag
ctagctaacaaggaggaaaagtcaaaaaagactaatgagaaaagtaagccagctgatgcc
aagccagaaaaaagaaaaagaaaagctgaagaaaagggtgttgataaagaacatgagatt
ttgtcgttgaaaagctctaaaccagaagttgctgaaatgatgaagccatcaccaaagcgg
aaaattgagccagatgctgagaaaacagataggacaccagaaaaagacaaagctgtgtta
actgccccagccaaaaaaattaagctcaacagagaaacaggaaaaaaaattggaagtgga
gaaaacctgcccaatgcaaaagaactcactgaaaaattggagccaacatccagtaaaatc
aaacaagaaaaagttaaaggaaaagtaagaagaaaagtaacagccactgaaggatctagc
tcaactcttgtggattataccagtaccagctctactggaggtagccctgtaaggaagtgt
gaagaaaaaacagacacaaaacgaactgtcattaagaccatggaagaatataataatgat
aatacagctcccgctgaagatgttattattatgattcaggttcctcaatcaaagtgggac
aaagatgactttgaatctgaagaggaagacattaaatctacacaagctttgtcaagtgta
ggaaagcctgctagtgttataaaaaatgttagcactaagccatcaaatcctgttaaactt
attgaaaaagaaagcgagccatcagagaaaattcagaaacccacaaaagaagtaagccac
gaaggtgtacagcatgaggccaaaagttccaaaacttgttcatccagtgataaaggaaaa
accaaagatcgggatcattctgtgtcagataaggaaaactctgaaaaaaggaaaagcagc
attcagacagaaaaagatactactgtagatcgtataagtgaacaaggaaactttaaaagt
ctttctcaatcttccaaagacagtagaacttcagataaacatgattctgggcgtggttcc
tcaagtaaagactttacacctaatagagacaaaaaaatagactatgataacagagatcac
tctggttccaaacggagagatgaaaggagtgacttaacaagaagaaaagattctccttct
cgaactaaattagaatcttcattgggtcagaaaaataaactgaaggatgagaggacagat
ttacctaaaaagggagttggagagtcaaaaagaggcaactctagtccttcaaaggatagg
agaccatatgatcataaagctgctcatgattccaaacgttcaaatgatgacaataagtct
gtggacaaaaatccagttaaagaaagagaaaagcatatatcagaaacaaagaacaataaa
gagaaagagttaagtggaaataaattattttgtaagcatagctcaccagatacacaaatt
gaaaaagagcatgttactacagggcaaaatgataagactgttgtcaaacctaagccccag
ttaagtcattcctctcgactttcttcagacttaacaagagaaactgatgaggctgctttt
gtaccagactataatgaaagtgacagtgagagtaatgtgtctgcaaaagaggaagaaact
ttggggaaaaatcctaaggaactgaaagaaaaggtggcagagaaagctaaagagaccctg
gagacaacagtagttggccaaataggtataagaagtcagagtcaaagtagtcctagtgtt
agccgaagtcgcagtcatagcccttctggaagccaaacacgaagccacagcagcagtgct
agctcagcagaaagtcaggatagcaagaagaagaaaaagaaaaaggaaaaaaagaagcac
aagaaacataaaaaacataagaaacataagaaacacacaggcactgagttagaattggaa
aagagccaaaaacacaagcataagaagaaaaaatccaagaaaagcaaagataaagaaaag
gagaaggaaaaggatgaccaaaaagttaaatctgtcactgtataa
DBGET
integrated database retrieval system
