Monodelphis domestica (gray short-tailed opossum): 100013648
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Entry
100013648 CDS
T01031
Symbol
COLEC12
Name
(RefSeq) collectin subfamily member 12
KO
K10062
collectin sub-family member 12
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100013648 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100013648 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mdo04091
]
100013648 (COLEC12)
Membrane trafficking [BR:
mdo04131
]
Endocytosis
Phagocytosis
Opsonins
100013648 (COLEC12)
Lectins [BR:
mdo04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
100013648 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
EzrA
Alpha-2-MRAP_C
Fez1
DNA_pol_B_exo2
SepF
Fib_alpha
DUF6437
Crescentin
ATG14
Motif
Other DBs
NCBI-GeneID:
100013648
NCBI-ProteinID:
XP_007487701
Ensembl:
ENSMODG00000021481
UniProt:
F7G364
LinkDB
All DBs
Position
3:complement(264692607..264934115)
Genome browser
AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDNVTGGMETSHLRYNEKLTEVESGLKKLGDQTGQKAVSTNTELSSFRSDILDLRQ
QLHEITEKTSKNKDALEKLQESGNILDDRQSQMRETLENNSFLITTVNKTLQAYNGYVNN
LQQDTSVLQGNLQSQMHSHNVVIMNLNNLNLTQVQQRNLINSLQRSVDDTSQAIQRIKND
FQNLQQVFLQARKDTDWLKEKVQNLQTLAANNSALAKANNDTLEDMNSQLNSFNGQLDNI
TTISQANEQNLKDLQDYHKESENRTTTKFNQLEERFQLFETDIVNIISNISYTAHHLRTL
TGNLNDVRTTCTDTLTKHTDDLTSLNNTLANIRLDSTTLRMQQDVMRSRLDIEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGPQGPLGPTGNKGQKGEKGEAGPPGP
VGERGPVGPIGPPGDKGSKGSKGSQGPKGQRGSPGKTGPPGPSGDPGPPGPAGKDGAPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAMAPLALQNEPTP
APVPNGCPPHWKNYTDKCYYFSTEKEIFNDAKLFCEDRSSHLVFINTREEQQWIKKQMVG
RDSLWIGLTDSEQENEWKWLDGTTLKYINWKPGQPDNWGHGHGPGEDCAGLIYTGQWNDF
QCEDINNFICEKDREPAPTSAS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgattttgcagaagaggaggaggtgcagtccttcggttacaagaggtttggt
attcaagaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagttttctatc
atattattatatattctgtgtgccttgctaacaatcacagtagccatcctgggatacaaa
gttgtagagaaaatggacaatgttacaggtggcatggagacatcacatctacgatacaat
gagaaactcacagaagtggagagtggtctgaagaaattaggagaccaaactgggcagaaa
gctgtgagcaccaacacagaactttcctccttcagatcagacatactagatcttagacaa
caacttcatgagattacagagaaaaccagcaagaataaggatgcactagaaaagttgcag
gagagcgggaatattctggatgacagacagagccaaatgagagaaacattggagaataac
tctttcctgatcaccactgtcaacaaaaccctccaggcttacaacggctatgtcaacaat
ctgcaacaagatacaagtgttctccagggcaatttacagagccaaatgcattcacataat
gtggtcatcatgaacttaaacaacctgaatctaacacaagtgcaacaaagaaacctaatt
aacagtctgcagaggtctgtggatgacacaagccaagctatccagcgaattaagaatgac
tttcaaaatctgcaacaagttttccttcaagcaaggaaagatacagattggcttaaggag
aaagtgcagaacttgcaaacactggctgccaacaactctgccttagccaaagctaacaat
gatactctagaggacatgaatagccaacttaactctttcaatggtcagttggacaatatc
actactatctcacaagccaatgaacagaacctgaaagaccttcaagactaccacaaagag
tcagaaaacagaaccaccactaagtttaaccagctagaggaacgatttcaactctttgaa
acagatatagttaatatcattagcaacatcagctatacagcccaccacttgcggacactg
actggcaacctgaatgatgtcaggacaacttgcacagacaccttaaccaaacacacagat
gatctaacttccttgaataatacactggccaacattcgcttagattctacaactctcagg
atgcagcaagatgtcatgagatcaaggttagatatcgaagtagccaacttgtctgtgatc
atggaagaaatgaaactggtcgactccaagcatggtcaactcatcaagaattttacaata
ctacaaggccctcctggtccccgaggacctaaaggtgacaggggaccccaaggacctctt
ggtcctactggcaacaaaggacagaaaggagaaaaaggagaggctgggccaccaggccca
gtaggggagagaggccctgtggggccaatcggtcctccaggggacaaaggcagtaagggc
tccaaagggtcccaaggaccaaaaggacaacgaggatccccagggaagactggcccaccg
ggaccaagtggagacccaggccctccaggtcctgctggcaaggatggtgctcctggtccc
cagggtccacctggcttccaaggattacaaggcacagtgggagagcctggagttcctggt
ccccgaggacttcctggactacctggggtcccaggtatgccgggtccaaagggaccacct
gggcccccaggcccctcaggagccatggcaccgttggccctacagaatgaaccaacacca
gcaccagtgcctaacgggtgccctcctcactggaagaactacacagacaaatgctactat
ttttcaacagaaaaagaaatttttaatgatgcaaaacttttctgtgaagacaggtcttca
catctagtcttcataaacacaagagaagaacagcaatggataaaaaagcagatggtggga
agagacagtctctggattgggcttacagactctgaacaagagaatgagtggaagtggcta
gatgggactaccctgaaatacataaattggaaaccaggacagcctgataactggggtcat
ggccatggaccaggagaagactgtgctgggctaatttatactgggcaatggaatgatttc
cagtgtgaagacattaacaacttcatttgtgaaaaagacagggagccagcaccaacttct
gcatcataa
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integrated database retrieval system
