KEGG T01031: 100014081

Monodelphis domestica (gray short-tailed opossum): 100014081

Entry

100014081         CDS       T01031

Symbol

SF3B4

Name

(RefSeq) splicing factor 3b subunit 4

K12831

splicing factor 3B subunit 4

Organism

mdo Monodelphis domestica (gray short-tailed opossum)

Pathway

mdo03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:mdo00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100014081 (SF3B4)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdo03041]
    100014081 (SF3B4)
Spliceosome [BR:mdo03041]
Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100014081 (SF3B4)
Complex B
    100014081 (SF3B4)
Complex C
   U2 SnRNP specific factors
    100014081 (SF3B4)

SSDB

Motif

Pfam:

RRM_1 RRM_7 OB_RNB

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

2:complement(495044406..495047928)

AA seq 424 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPP
GSFPPPVPPPGALPPGIPPAMPPPPMPPGAGAHGPPSAGTPGAGHPGHGHSHPHPFPPGG
MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGS
PMGHPGPMPPHGMRGPPPLMPPHGYSGPPRPPPYGYQRGPLPPPRPSPRPPVPPRGPLRG
PLPQ

NT seq 1275 nt +upstreamnt +downstreamnt
atggcggccgggcccatctccgaacggaatcaggatgccaccgtgtacgtggggggcctg
gacgagaaagtcagtgaacctctgctatgggaactctttcttcaggctggacccgtggtc
aacacccatatgcccaaagacagggtcacgggccagcaccaaggctacggatttgtggaa
ttcctgagtgaggaggatgctgactatgccattaagatcatgaatatgatcaagctgtat
gggaagccaatacgagtgaacaaagcatcagctcacaacaagaacttagatgtgggggcc
aacattttcatagggaacctagatcctgagattgatgagaagctgctctatgataccttc
agcgcctttggggttatcttgcagactcccaaaataatgcgggaccctgacacaggcaac
tccaagggctatgcctttattaattttgcatcatttgatgcttctgatgcagcaattgag
gccatgaatgggcaatacctatgtaatcgacctatcacagtatcttatgccttcaaaaag
gactctaagggtgaacgccatggctctgcagctgagcgacttctggcagcacagaacccg
ttgtctcaggcagatcggcctcatcagctatttgctgatgcaccacccccaccctctgcc
cctaatcctgtcgtgtcttctctgggttctgggcttcctccaccaggtatgcccccacca
ggctcattcccacctccagtgccacctcctggagcccttcctccaggaatacccccagca
atgcctcccccacctatgcctcctggagctggagcccatggcccaccatcagcaggaacc
cctggggctggacatcctggacatggacactcacatccccatccattcccaccaggtggg
atgcctcatcccggtatgtctcagatgcagctcgcccaccatggcccccatggcttggga
cacccccatgcagggcccccaggctcagggggacaacctcctcctcgaccaccaccagga
atgcctcatcctggccctcctcctatgggaatgccgccccgaggaccaccttttggatct
cccatgggtcacccaggccccatgcccccccatgggatgcgaggacctcctccgttaatg
cccccccatggatacagcggtccccctcgacctccaccctatggctatcagagaggacct
cttcctccacctcgaccttctccacgacccccagtacctccccgtggtccacttcggggt
cctcttcctcagtag

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