Monodelphis domestica (gray short-tailed opossum): 100016102
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Entry
100016102 CDS
T01031
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100016102 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100016102 (CSTF2)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100016102 (CSTF2)
U7-dependent histone pre-mRNA processing factors
100016102 (CSTF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100016102
NCBI-ProteinID:
XP_001364467
Ensembl:
ENSMODG00000011785
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All DBs
Position
X:complement(79148270..79179816)
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AA seq
551 aa
AA seq
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MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPIS
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQANIPSLIQGNPPPGQGPSAPMNQPNAAASQPQPLGGMHVNGAPPLM
QPPLPGGVPAPGAMPTPGPGPGPLAPGGGMPSKVGMPGGGPVSLDRGQVPMPDPRAPMQR
GPMPAGGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYMGPPHQGPPMHHVPGHDSRGPP
HEMRGGPLGEPRPLMGEPRGPMLDQRGPPMDGRGGRDPRGMDARAMEARAMEARGMDARA
MEARGMEARSLESRAMEARGMDARAMETRGPGPRGPMPGGLQGPGPINMGAGGPQGPRQV
PGMQGSGLQGGGQPGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILIL
KEQIQKSTGAP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtctggcggttcgtgaccctgcggtggaccgatcgctgcgctctgtatttgtg
ggtaacattccatatgaagctacagaagaacagttaaaggacatcttttctgaagttgga
ccagtggtgagtttcagattggtatatgatcgagaaacaggcaaaccaaaaggttatggt
ttttgtgaatatcaagaccaagaaacggcccttagtgctatgcggaacctgaatggccgg
gagttcagtgggcgggcacttcgagtagacaacgctgccagtgagaagaacaaggaggaa
ctaaagagccttggcactggtgcccccatcattgaatctccttatggagacccgatcagc
ccagaggatgctccagaatccatcagcagagcagttgccagtctgccaccagaacagatg
tttgagttgatgaaacaaatgaagctttgtgtacagaacagtccccaagaagcaagaaat
atgctcctccaaaacccccagctagcctatgctttactgcaggcacaagtagtgatgcga
attgtagacccagagattgcactgaaaattttacaccgtcaagcaaatatcccatctcta
attcaaggtaacccgccacccggccaaggacctagtgctccaatgaaccagccaaatgct
gcagcctctcaaccacagcccttgggtggaatgcatgtaaatggagctcctcctctgatg
cagccacctttgccaggtggcgttccagcaccaggagcaatgcctactcccggacctggc
cctggccctttggcacctggaggtggcatgccatccaaggttggaatgccaggcggtggg
cctgtatccctagatcgaggccaagtgccaatgccagaccccagggcccctatgcaacgt
ggacctatgcctgctggcggcccacctccccgaggtcttttaggagatgctccaaatgac
ccacgtggagggactttgctctcagtcactggagaagtagaacccagaggttacatgggg
ccaccccatcagggtcctcctatgcaccatgtccctggccatgacagccgtggtcctcca
catgagatgaggggaggaccactgggagagccccggcctctcatgggagagcccagagga
cctatgctggatcagaggggtccacccatggatggcagaggtggaagagacccccgaggg
atggatgccagagcaatggaggccagagcaatggaggctagaggcatggatgccagagca
atggaagccagggggatggaggcccgaagcttagagtcaagggcaatggaagctagaggc
atggatgccagagcaatggaaacaagaggccctggccccagaggcccaatgcctggggga
ctccagggacctggaccaatcaacatgggagccggtggcccccagggacccaggcaggtc
ccaggcatgcagggatctggtctgcagggtggaggtcagcctggggggtttagtcctgga
cagaaccaagttactccacaggatcatgaaaaggctgctttgattatgcaagtgctccaa
ctgaccgcagaccaaattgctatgctgcctcctgagcaacggcagagtatcctgatttta
aaggaacagatacagaaatctactggtgccccttga
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