Monodelphis domestica (gray short-tailed opossum): 100016256
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Entry
100016256 CDS
T01031
Symbol
SMARCA2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082
ATP-dependent chromatin remodeling
mdo04714
Thermogenesis
mdo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100016256 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100016256 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100016256 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100016256 (SMARCA2)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100016256 (SMARCA2)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100016256 (SMARCA2)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100016256 (SMARCA2)
Chromatin remodeling factors
BAF complex
100016256 (SMARCA2)
PBAF complex
100016256 (SMARCA2)
GBAF(ncBAF) complex
100016256 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100016256
NCBI-ProteinID:
XP_001365802
Ensembl:
ENSMODG00000003578
UniProt:
F7FQB7
LinkDB
All DBs
Position
6:101193705..101400759
Genome browser
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDFPQEGIHQMHKSIDGMHDKGIVEDLHCSSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPMISGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQPPLVSFNRPSGIGMHPIGTPP
AGPGQTSGIPGHTSTMTPKTWAEGQAPDMNVPSTPQKLAVPPPSGRPSPAPPAAQPAAAL
PGPSVPQPTPGQPSPVVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE
NLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT
LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVAT
WHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTN
LVWEHKQAQAAKEKKKRRRRKKKAEENAEGMESGLGPDGEPIDESSQMSDLPVKVTHTET
GKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSEYEEEDDEEELSRQETEEKILL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQAADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVEKEPGKEDVEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDEE
EEEDEDESESEAKSVKVKIKLNKKDDKGRDKGKGKKRQSRGKAKPVVSDYDSDEEQDEND
QSEGSGTDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctggtgcaatgccccaccctggaccttcaccagggccagga
ccttctcctggaccaattcttggacccagtcctgggccagggccatctccaggttcagtg
cacagcatgatgggaccaagtcctggaccacccagtgttccgcacccaatgccaacaatg
gggcccactgattttccacaggaaggaatacaccaaatgcacaagtccattgatggtatg
catgacaagggaattgttgaagatctacattgtagctctatgaagggtaccggcatgcga
ccaccacatcctggaatgggcccacctcagagtccgatggatcaacatagccaaggttat
atgtctccgcacccatctccattgggagccccagaacacgtctccagtccaatgtctgga
gggggtccaactccaccccagatgccaccaagccagccaggacccatgatatcaggagat
cctcaggccatgagccaacccaaccgaggtccttcaccttttagccctgtccagctgcat
cagctccgagctcaaattttagcttacaaaatgttggccagaggccagccactaccagaa
accctgcagctcgcagtgcaggggaagaggacgctgcctggcatccagcaacaacaacca
cctcttgtcagcttcaatcggccatctggcatagggatgcatccaattggcacacctcca
gcggggccaggacagacgtcagggattccagggcacacatctacaatgactcctaaaaca
tgggcagaaggtcaagcgccagatatgaatgttccaagtaccccacaaaagcttgcagtt
ccacctccaagtggaaggccttcaccagcccctccagctgctcagcctgctgctgccctg
cctggaccttctgtgccacagccaacccctggacagccttcacccgttgttcaactacaa
caaaagcagaatcggatcagccccattcagaaaccacagggactggatcctgttgaaata
ctccaggagagagaatacagacttcaggctcgtatagctcatagaatccaagaactggaa
aatttgccaggttctttgccaccagatttacgaaccaaggctacagtggaactgaaggct
cttaggttactgaatttccaacggcagttaagacaagaagtggtagcctgtatgcgtcgg
gacacaaccttagagactgccctgaactccaaagcctacaaacgcagcaagagacaaaca
ctgagggaagctcgcatgacagaaaagcttgagaaacaacagaagattgaacaggagaga
aagcgcagacagaagcaccaggagtacctgaacagcattttgcaacatgcaaaagatttt
aaggagtatcatcgatcagtggctgggaaaattcagaaactttctaaagcagtggcaact
tggcatgctaacactgaacgggagcagaagaaagaaacagaacgaatcgaaaaagaaaga
atgaggagactgatggctgaagatgaagaaggctaccgaaaactgattgatcagaagaaa
gataggcgtttagcttaccttctacagcagactgatgagtacgtggctaacctgactaac
ctggtatgggagcacaaacaagcacaagcagccaaagaaaagaaaaagagaagacggagg
aagaagaaggcagaagagaatgcagagggaatggagtctggcctgggaccagatggggag
ccaatagatgaaagcagtcagatgagtgatcttcctgtcaaagtaactcacacggaaact
ggcaaagttcttcttggacccgaagctccaaaagcaagtcaactggatgcgtggttagaa
atgaatcctggttatgaagttgcccctagatctgatagtgaggagagtgattctgaatat
gaggaggaggatgatgaagaagaactgagcaggcaggaaaccgaagagaagatacttcta
gatccaaacagtgaagaagtttctgagaaagatgctaagcagattattgagactgcgaag
caagatgtagatgatgaatacagcatgcagtatagtgctagagggtcccagtcctactat
accgtagctcatgcaatatcagagagggtcgagaaacagtctgctcttctcattaatggc
accctaaagcattatcagctccagggcctggaatggatggtttcactgtataataacaat
ttgaatggaattttagctgatgaaatggggctaggaaagaccatacagaccattgcactc
atcacttatctgatggagcacaaaagactcaatggaccctatctcatcattgttcccctt
tcgactttatctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatc
tcttacaagggcactccagctatgcgtcgatcgcttgttcctcaacttcgtagtggaaaa
tttaatgtccttttaactacttatgaatacattataaaggataagcacatcctcgctaag
attcggtggaagtacatgatagtagatgaaggccaccggatgaagaatcatcactgcaag
ctgactcaggtcttgaatactcactatgtggcgccgaggcggatactcttgactgggacc
cccctgcagaataaactacctgaactctgggccctcctcaactttcttcttcctaccatt
ttcaagagctgtagtacatttgagcagtggttcaatgccccctttgccatgactggagaa
agggtggacttaaatgaagaggagactattttgattattagacgtcttcataaagtactg
agaccatttctgctgaggagattgaagaaggaagtggaatcccagctaccagaaaaggtt
gaatatgtgatcaaatgtgacatgtcagctcttcagaaaattctataccgccatatgcaa
gcaaagggaatcctcctcacagatggttctgagaaagataaaaagggcaaaggaggggct
aaaacactgatgaacactatcatgcaattgagaaagatatgtaatcacccatatatgttt
cagcacattgaggaatcctttgctgagcatctaggctactcaagtggggttatcaatgga
gctgagctctaccgagcctcggggaagtttgagctcctggaccgcatcctgccaaagctg
agggccaccaatcaccgagtattactcttctgccagatgacatccctcatgaccatcatg
gaggactactttgcttttcggaacttcctttacctacgccttgatggtaccacaaaatca
gaagatcgtgctgccttgctgaagaagttcaacgagcctggttcacagtttttcattttc
ttgctgagtacccgagcagggggcctgggcctgaaccttcaggcagctgatactgttgtc
atctttgatagtgattggaatcctcaccaggatttgcaggcccaagatcgagctcaccgg
attggccagcagaacgaagtccgggtgcttagactctgcactgtaaacagtgtcgaggaa
aagattctcgcagcagcaaaatacaaattgaatgtggaccagaaagttatccaagcaggc
atgtttgatcagaaatcttcgagccacgagaggagggcttttctgcaggccatattggag
catgaagaagaaaacgaggaagaagatgaagtccctgatgacgagactctgaatcaaatg
attgcccgaagagaggaagaatttgatctttttatgcgtatggacatggaccgacgcagg
gaggatgcccgaaatccaaaacgtaagcctcgcctgatggaagaagatgagctgccatct
tggattattaaagatgatgctgaagtagaaaggcttacttgtgaagaagaggaagagaaa
atatttggcagagggtcccgccaacgcagggatgtggactacagtgatgcactcacagag
aagcagtggctaagggcaatcgaagacggtaatttggaagaaatggaagaggaagtgcgg
ctcaaaaaaagaaaaagacgaagaaatgtggagaaagagcctgggaaggaagatgtggaa
aaagctaaaaagagaagaggccgacctccagcagagaaattgtcgccaaacccccccaaa
ctgacaaagcagatgaatgccattattgacactgtaataaactacaaggatagttcaggg
cgacagctaagtgaagtcttcattcagcttccatcaaggaaagaattaccagaatactat
gaattaattagaaagccagtggatttcaaaaaaataaaggaaagaatccgtaatcacaag
taccggagccttggtgatttggagaaagatgttatgctgctctgtcataatgctcaaaca
ttcaacttggagggatcgcagatctatgaggactccattgttctacagtcagtgtttaag
agcgcccggcagaaaattgccaaagaagaagagagtgaggatgaaagcaatgatgaggaa
gaagaagaagatgaggatgaatcagaatctgaggcaaaatcggtgaaagtgaaaatcaaa
cttaataaaaaagacgacaaaggccgggacaaaggaaaaggcaagaagaggcagagccga
ggaaaagccaaaccagttgtgagcgattatgacagtgatgaggagcaggatgaaaatgat
cagtcggaaggaagtggaactgatgacgagtga
DBGET
integrated database retrieval system
