Monodelphis domestica (gray short-tailed opossum): 100016613
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Entry
100016613 CDS
T01031
Symbol
JMJD1C
Name
(RefSeq) jumonji domain containing 1C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100016613 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100016613 (JMJD1C)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100016613 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
100016613
NCBI-ProteinID:
XP_016277984
Ensembl:
ENSMODG00000017196
LinkDB
All DBs
Position
1:34383351..34471629
Genome browser
AA seq
2337 aa
AA seq
DB search
MIVMNDQVLEPQNVDPSMVQMTFLDDVHSLLKEEDIGITSRRRSCSTQSSTTVHVHYTRA
QASSPRPAMNSQAAAPKQNPHQQQQRNIHPNQRKGSDSSVPDEEKMKEEKCDFLGRGENL
KSKNKHFLNKRRKIEEDEKKLNIKRLRTDNVSDYSECSDSENSNKRMTESSSEQNAENEM
KNKSTSKINGDEGKSQRSEGAEEQAAKSQSPWAQIQEDRKHEDVESLKSPTLEPHGKPLL
GATEEVLFYDPNANDLHIQDCKAEKSHTLELLPKEQFVSGPPTPKCVIDITNETNAEKVV
QENSTRTFGFQTFQKIEPHSSDSKLLFSNAKYLETRKQDTEQSWVSSIVNKVDLASSGGL
NPLSMNEHLNAEKEKNPFAPYLASLNVASLTEDSKLHKPSPPTEGLKSKFSASTDAPKPK
ANSLLDAVQPKLTHSPDSGKSKTSYSNSSHTTGERRLTNKTEHDLPRSSFHPVPTRVSAL
ETTKSPLIIDKNEHFTVYRDPALIGQETGTNHISPFLNQHTYPIHSSSHRTCLNPNSHHP
TLTATPHLLAGSSTQTPLPPISSHPLNSAPHPSVHHPHLLPTVLPGVPPASLLGGHPRLE
AAHASSLSHLALAHQQQQQMLQHPSPHLLGQAHPPASYNQLGLYPIIWQYPNGTHAYSGL
GLPSSKWVHPENPVNAEASIRRNTPSPWLHQPTPVTSADGLGLLSHIPVRPSSADPHRPL
KMTAHSSPPLSKALVDHHKEELERKAFIEPLRTVASTPAKNDLDRIPAGKDSHLHRHFVD
PMMSQLQRPPQESGERLSKYKEEHRRVLQESLDVAPFTTKMKPLEGERENYSRMTPLSSS
SPKSHPIKQDKEVDRSVSELYKMKHSVPQSLPQSNYFTTISNSVVNEPPRSFPSKEVSSL
YTDKQSNSPSTGASPQTLTSFISSLSKPPPLIKHQPEGESIGSKVAEQLPQQMPSHSITA
FRNDCRSPTHLTVSSSNTIRSMPALHRAPVFHPPIHPSLDRKESTYSSLSPPTLTPVLPV
NAGGKVQELQKPPTLVPEPKDAQTTYKNASEHSLSEMWRSNNALGNEKANWPVERNSGKS
PAAATASVIVRPPSSVKFESVPAMQPAPRDQGTERSSTSSTDGWKPAEAREPGRVILPNS
NSAAPHSQGEKNLEAVSQGSVPSSIIMPTATSLMCSTKTDVTPAAATTTSASSWVGSEVT
YSLSSTVLTATTLQCVSPKNIGQPSTHAQECKVSTTAPSATASSKTSRATQPSSVFSSTA
DFIHLKKHKAALAAAQFKSGNTSEAEPNPGKSQACPAPIPLESTAVTCSTPNKTHTSGSG
QNSQTSQPNYHTKLKKAWLTRHSEEDKNTNKMENSGSTVSEIIKPCSVNLIASTSSEIHN
SVEGKGLGDKPAKDDRASRRKAKRAYESGSESGGDSDGSESKAEQRTKRQPKPTYKKKQN
DLQKRKGELEEEAKPNGVLSRSSREKSKLKLPSSSNSAGIPRSVLKDWRKVKKLKQTGES
FLQDDSCCEIGPNLQKCRECRLIRNKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFS
SPDQYDDEALSLWTHENYDDDELDLETSKYILNIIGDKFCQLVTSEKTALSWVKKDAKIA
WKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKG
QPHDHKHLMPTQIIPGSVLTDLLDAMHNLREKFDIESHCHCTNKQSIQVGKIPAMNGVSQ
VLQNVLNHSNKISLCMPESQQQNSPQKSETNGNTSPGSDVSTDSKLTPPESQSPLHWLAD
LAEQKSREEKKENKDCPLGKHMKEERDCDGTDSPNGKTSPAVSQNNEQGSTLRDLLTTTA
GKLRLGSTDAGIAFAPVYSTGAPSGKSGRTVPNILDDIIASVVENKIPPNKASKTEEDEE
GGGGEGGGGECEQGRPEDGQQTALDEGDHLSENVPHSWMCEKHVLWLQDHKNNDNWKLFK
QCWKQGQPVVVSGVHKKMNISLWKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFE
DISKRQKIKSGETVVLKLKDCPSGEDFKTMMPARYEDLFKSLPLPEYCNPEGKFNLASHL
PGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGI
LKKFEEEDLDDLLRRRLKDSTETPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPEHDP
IRDQSWYVNKKLRQRLLEEYGVKTCTVVQFLGDAIILPAGALHQVQNFHSCIQVTEDFVS
PEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRALKIREDEMEDLEEN
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgattgttatgaatgaccaggtactagaaccacagaatgtcgatccttctatggttcaa
atgacctttctcgatgatgttcactctctattgaaagaagaagatattggcatcacttca
cgccgtaggtcttgttctactcagagtagcaccactgttcatgttcattatacacgtgct
caagcaagtagtccaaggccagctatgaactcgcaggctgcagcacccaaacagaatcca
caccagcagcagcagcgaaacattcacccgaaccagaggaagggctcagatagtagtgtg
ccagatgaagagaagatgaaggaagagaaatgtgatttcctaggccgtggagaaaatctt
aaaagcaaaaacaaacactttcttaataaaagaagaaaaattgaagaggatgaaaagaag
ctaaatataaaaagacttcgaacagacaatgtttcagactattctgagtgcagcgactca
gaaaattctaataaaagaatgacagagtcatcttctgagcagaatgctgaaaatgagatg
aagaacaaaagcacttcaaagatcaatggggacgaaggaaagtcccagcgtagtgaggga
gcagaggagcaagcagcaaagagtcagtctccctgggctcagatacaagaagataggaaa
catgaagatgtggaaagtcttaagtcacccaccctggagccccatggaaagcctcttctt
ggggccacagaagaagttctcttttatgatccaaatgccaatgatttacatattcaagat
tgcaaagcagagaagtcacataccctggaattactaccaaaggagcaatttgtgtcggga
ccccctacgccgaaatgtgttattgacattacaaatgaaaccaatgcagaaaaggtggtt
caggaaaactccacaaggacctttggttttcagacctttcaaaaaatagagcctcatagt
agtgactcaaagcttttgtttagcaatgcaaaatatttagaaacaagaaagcaggatact
gaacagagctgggttagtagcattgtcaacaaagtggatttagcctcatctgggggtctg
aaccctttatcaatgaatgagcatctgaatgctgaaaaagagaaaaacccatttgcaccc
tatctcgcatcattaaatgttgcttctctgactgaggatagcaaattgcataaaccaagt
ccgcccactgagggcctgaagtccaaattcagtgcttcaacagatgcacccaaaccaaaa
gctaattctttacttgatgctgttcaacccaaactcactcattctcctgactctgggaag
tctaagaccagttactcaaacagtagtcacaccactggagagagacggttgacaaataaa
acagaacatgatttaccaagatctagttttcatccagttcccactcgtgtcagtgcatta
gaaaccaccaagagccctcttatcattgataaaaatgagcattttacagtttacagagat
cctgcgcttattgggcaagagacaggaacgaatcacatttcaccgttcttaaaccagcac
acttatcctattcattcttcatcccatagaacttgcctcaatccaaactctcatcatccc
actttaactgccactccccatttgttggctggctcttcaacccaaacccctttgcctccg
attagcagtcatcctctgaacagtgcccctcacccctctgttcatcaccctcatttgctt
ccaacagtgttacctggagtgcctccagcctccttactaggcggccatccacgactagaa
gctgctcatgccagcagcttgagccacttagccctagcccaccagcagcagcagcagatg
ttacagcacccgtcacctcaccttctgggacaagcacaccctcctgcttcctataatcag
cttggactctacccaattatctggcagtatcctaatgggacacatgcctactcaggactt
ggcctgccctcttctaagtgggtccacccagaaaacccagttaatgccgaagcctccata
cggaggaatactcccagtccttggttacatcagcccacccctgtgacctctgctgatggt
cttgggttactgagtcacattcctgtcaggccatccagtgcagatcctcatcggcccctt
aaaatgacagctcattctagtccaccgttgtccaaagcgctagtagaccatcacaaagaa
gaattggagaggaaagcttttattgaacccctcaggactgttgcctctaccccagccaag
aatgatctggatcgaatcccagctggaaaggacagtcacttacacagacattttgtggat
ccaatgatgagtcagctacagaggcccccccaggagagtggtgagaggctgagcaagtac
aaagaggagcaccgccgagttctccaagaaagtcttgatgtcgcccccttcaccacgaag
atgaagcccctcgagggggagagggaaaattattccagaatgacacctttatcatcctcg
agtcccaaaagccaccccattaaacaagacaaagaggtggaccgctccgtgtcagaactt
tacaaaatgaagcactcggtgcctcagagtttaccacaaagtaactacttcaccactatc
tccaacagtgttgtcaatgaacctccgcgatcatttccatccaaagaagtctccagtcta
tacactgataagcagagtaacagcccttccaccggagccagtcctcaaaccctgacttca
tttatttcatccctttcaaagcccccacctttaatcaaacaccaacctgaaggggaaagc
ataggaagcaaggtggcagaacagcttccccaacaaatgccttctcactctataactgcg
tttagaaatgactgtaggagtcctacccatctgacagtttcttcatccaataccatccgg
agtatgcctgcattacacagagcacccgtttttcacccacccattcatcccagtttggat
agaaaggaaagcacctatagcagcctttcacctccaaccttaactccagttctgccagta
aatgctggcggaaaagtccaggaattgcagaaacctccaactcttgtccctgagccaaaa
gacgctcagaccacttacaagaatgcctctgagcacagtttgtcagaaatgtggaggtca
aataatgccctcggcaatgagaaagccaactggcctgtggagagaaacagtggaaagtcc
cccgccgccgccacagcctcagtcatcgtacgtcccccttcgagtgtcaagttcgagagt
gtgccggcgatgcagccggctcccagggatcaggggaccgagagatcgtcaacgagttca
acagatggctggaaaccagccgaagccagagagcctgggagagtcattcttcccaattct
aactcagctgctcctcacagccagggtgaaaagaacttggaggctgtctcccagggcagt
gtgcccagctccatcatcatgcccacagccaccagtctgatgtgcagcaccaaaacggac
gtgaccccagctgctgctaccactaccagcgcctccagctgggtcgggtccgaagtaacg
tattccctatcgagtaccgttctgactgccacgactttacagtgtgtttccccaaagaac
atcggccagccgtcgactcatgcccaggagtgcaaagtcagcaccacagccccgagtgcc
acagccagtagcaagacgagcagagcgacccagcccagctctgtcttctccagcacagct
gactttatccacttaaagaaacataaggccgcactggctgcagctcaatttaaaagcggg
aacactagtgaagctgagcccaatcctgggaaaagtcaggcatgccctgctcccattccc
cttgagagtactgccgttacctgcagtactcccaacaagacccacacttcaggcagtggg
cagaactcccagacaagtcagcctaattaccacacaaagctgaaaaaggcctggctcact
agacactcggaggaagataaaaacactaacaagatggaaaattcaggaagcactgtgtca
gagatcattaagccatgttccgtcaatctgatagcctccacctcgagtgagatccacaac
agtgtggagggcaagggcctaggagataagcctgcaaaagatgacagagcgagcaggagg
aaggcgaaaagggcttatgagtctggctctgagagcggaggagactcggatggaagtgag
agcaaggctgagcagaggaccaagcgccagcccaaaccaacatataaaaagaagcaaaac
gacttgcagaagagaaagggtgagctagaagaagaagcaaaacctaatggagttcttagc
aggagttcccgagagaagagcaaactcaagctgccaagcagcagcaacagtgctggcatt
cctcgttcagtattaaaagactggcgtaaagtgaaaaagttgaaacagaccggggagtcc
tttttacaggatgattcctgctgtgagatagggcccaatttgcagaagtgcagagaatgc
cgacttattcgaaataaaaaaggggaagaaccaactcactcaccagtgttttgtagattt
tactacttccgacgattgtctttcagtaagaatggagtggttagaatagatggtttctct
tctcctgaccagtatgatgacgaagctctgagtttatggacacatgaaaattacgatgat
gatgaactagacttagagacttctaaatatatcttgaatattattggtgataagttttgt
cagttagtaacatcagagaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcc
tggaagagagcagtgagaggcgtccgtgagatgtgtgacgcgtgtgaagccactctgttt
aatatccactgggtctgccagaaatgtgggtttgtggtctgtttagactgctataaagca
aaggaaaggaagagctcaagagataaagagctctatgcttggatgaaatgtgtcaaggga
caacctcatgatcacaaacacttgatgccaactcaaatcataccaggctctgttctgaca
gatcttctagatgcaatgcacaatcttagagaaaaatttgacattgagtctcattgccat
tgtactaacaaacaaagcatacaagttgggaaaattcctgcaatgaatggagtatctcaa
gttttgcagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcag
caacagaattcccctcaaaagtctgagactaatggtaataccagcccagggagtgatgta
agcacagacagcaagctaactcctccagaatcccagtctccactacactggctagcagat
cttgctgaacaaaaatccagagaagaaaagaaagaaaacaaagactgtccccttggaaaa
catatgaaagaagaaagagattgcgatggcaccgattctccaaatggcaaaacttcacct
gcagtgtcccagaataacgaacaaggatccaccttacgggacttactgaccaccacggca
ggcaagctacgtctgggctctacagatgccggcatcgcttttgctccagtgtattctaca
ggagccccaagtggcaaaagtggaaggactgtgccaaacatccttgatgacatcattgct
tcagttgtagaaaacaagattccaccaaataaagcctcaaagacagaagaagatgaagaa
ggaggaggaggagaaggtggaggaggtgaatgtgaacaaggaagacctgaagatggccaa
cagactgccctggatgagggtgatcatttgtccgagaatgtgccccactcatggatgtgc
gagaaacatgtcttatggttgcaagatcacaagaataatgacaactggaagcttttcaaa
cagtgctggaaacaaggacagccagtagtggtttctggtgtgcacaagaaaatgaacatc
agcttgtggaaagcagagtcaatcagtcttgactttggagaccaccaagcagatctcctg
aactgcaaggacagcataatttcaaatgccaatgttaaagaattctgggatggttttgaa
gacatttcaaaacggcaaaaaattaaaagtggagaaacggttgttttaaaattgaaagat
tgcccttcaggagaagacttcaaaactatgatgccagcaagatatgaagatctgtttaaa
agcctgccactgccagaatactgtaatcctgaaggaaaattcaatttggcctcccatttg
ccaggattttttgttcgtccagatctaggacccaggctctgtagtgcctatggtgtggct
gctgctaaggatcatgatataggaacaacaaatctccatattgaagtttctgatgttgtt
aacattttagtttatgttggcatagccaaaggaaatggagtcctctcaaaatcaggaata
ctcaagaaatttgaggaagaagacctggatgatcttttgaggagaaggttgaaggactca
acagaaacccctggtgctctatggcacatctatgcaggcaaggatgcagacaagataagg
gagtttcttcagaagattgcaaaagaacaaggccttgaagttctaccagagcatgaccca
attcgtgaccagagttggtatgtgaacaaaaaactccgccaaagactgcttgaagaatat
ggagttaaaacatgcactgttgtccagtttcttggtgatgcaattatcttaccagctggt
gcacttcatcaggtgcagaacttccacagctgcattcaggtgactgaagactttgtgtct
ccagaacatctcgtacaatcatttcacttaacccaggaactgaggctgctgaaggaagaa
atcaactatgatgataaactacaggtcaaaaatatcttgtaccacgcagtcaaagaaatg
gtgagagctctgaagatccgtgaagacgaaatggaggatctagaagagaactga
DBGET
integrated database retrieval system
