Monodelphis domestica (gray short-tailed opossum): 100017483
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Entry
100017483 CDS
T01031
Symbol
SYVN1
Name
(RefSeq) synoviolin 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04120
Ubiquitin mediated proteolysis
mdo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100017483 (SYVN1)
04120 Ubiquitin mediated proteolysis
100017483 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100017483 (SYVN1)
Enzymes [BR:
mdo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100017483 (SYVN1)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100017483 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
100017483
NCBI-ProteinID:
XP_007502763
Ensembl:
ENSMODG00000010088
UniProt:
F7BYZ7
LinkDB
All DBs
Position
8:14203987..14210096
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AA seq
592 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGALDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPVQSPPAPEPPEQGPPPAPHQP
PIIPPPPNFPQGLLPPFPPGMFPLWPPMGPFPPMPPPSNADVPPSSPSTSANTPRPNGSV
SETAPAPGFPFPPPWMGMPLPPPFGFPPMPVPPAGFAGLTPEELQALEGHERQHLEARLQ
SLRNIHTLLDAAMLQINQYLTVLASLGPPRPPAPASPPEASTMAAAASSSSSIPSSEATP
PSPGESPLPPDTAQPQPDTESLGAEELSEDGEPNTVELRRRRLQKLESPASH
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggccgtgatgatggcggccagcctggcgctgaccggggcggtggtggcc
cacgcctactacctcaagcaccagttctaccccactgtggtctacctgaccaagtccagc
ccgagcatggccgtcctatacatccaggccttcgtgcttgtcttcctcctgggcaaggtg
atgggcaaagtgtttttcgggcagctgcgagcagccgagatggagcacctcttggagcgc
tcctggtacgccgtcacagagacctgtctggccttcaccgtctttcgggatgacttcagc
ccccggttcgtggcgctcttcaccctcctcctcttcctcaagtgtttccactggctggct
gaggatcgggtcgactttatggagcgcagcccaaacatctcctggctctttcactgccgg
attgtctccctcatgctcctcctgggtgctctggacttcctctttgtcaatcacgcctat
cacagcatcctgacccggggggcctccgtgcagctggtctttggctttgagtacgccatc
ctgatgacgatggttcttacaatcttcatcaaatatgttctgcactcaatcgatctccag
aacgagaacccctgggacaacaaggctgtctacatgctctacacagaattgttcacaggc
ttcatcaaagtcctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactctttgccatccggcccatgtacctggccatgaggcagtttaagaaggcagtgacg
gatgcgatcatgtctcgccgggccatccgaaacatgaacacactgtacccagatgccact
cccgaggagctccaggccatggacaatgtctgcatcatctgcagagaagaaatggtgact
ggagccaagaggcttccctgcaaccatatcttccataccagctgcctgcgatcctggttc
cagcggcagcaaacctgccccacctgccgaatggatgtcctgcgagcttcacttcctgtc
cagtccccaccagccccagagcctcctgagcagggccctccccctgctccacaccagccc
cctatcatccccccaccccccaactttccccaaggcctcctgcctccatttcctcctggg
atgttccccttgtggcctcccatgggcccctttcctcctatgcctccccccagcaatgca
gatgtccctccttcctcaccttccacctcagccaatacccctcggcccaatgggtctgtc
tctgagaccgctccggctcccggctttcccttccctcccccctggatgggcatgcccctg
cctccaccatttgggttcccccccatgccagtgcccccagcaggctttgcaggcctgact
cctgaggagctgcaggccctggagggccatgagcggcagcatctggaagctcgactccaa
agccttcgaaacatccacaccctgctggacgctgccatgctgcagattaaccagtacctc
actgtgctggcctctctgggccctccccgacctcctgctcctgccagtcctcctgaggca
tctacaatggctgctgcagcatcctcttccagcagcatccccagctctgaagcgacaccc
ccctccccaggagagtccccactcccccctgacacagcacagccgcagccagatacagag
tctcttggggcagaggagctgagtgaagatggggagcccaacacggtcgagctccgccgc
cgccgcctgcagaagctggagtcccctgcctctcactga
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