Monodelphis domestica (gray short-tailed opossum): 100017530
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Entry
100017530 CDS
T01031
Symbol
COL8A1
Name
(RefSeq) collagen type VIII alpha 1 chain
KO
K23455
collagen type VIII alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100017530 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100017530
NCBI-ProteinID:
XP_001371063
Ensembl:
ENSMODG00000002306
UniProt:
A0A5F8GL51
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Position
4:complement(64630239..64867323)
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AA seq
740 aa
AA seq
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MAVSLTPLQLLGVVILIYLSFIRFIHGGAYYGIKQLPPQIPPQIPQYQPLGQQVPHMPLG
KDGLPMGKEMPHMQYGKEYPHLPQYMKEIPQVPRMGKEAAPKKSKEIPLASLRGEQGPRG
EPGPRGPPGPPGIPGHGIPGIKGKPGPQGYPGIGKPGMPGMPGKPGGMGMPGAKGEIGPK
GEIGPMGMPGPQGPPGPHGLPGVGKPGGPGLPGQPGPKGEPGPKGQPGLPGLQGPKGEKG
FGMPGLPGLKGPPGMHGPPGPVGLPGIGKPGVTGFPGPQGPLGKPGLQGEPGPQGPIGVP
GIQGPPGVPGVGKPGQDGIPGRPGFPGGKGEQGLPGLPGPPGQPGIGKPGFPGSKGDRGI
GGLPGALGPRGEKGPIGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGAMGPQGP
LGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGIPGAPGLIGPKGE
PGIPGDQGLQGPSGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAGLHGPP
GKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPAHGEYLPEMGPGIDGVKTPHAYGGK
KGKNGGVAYEMPAFTAELTTPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGVYYFA
YHVHCKGGNVWVALFKNNDPMMYTYDEYKKGFLDQASGSAVLQLRPGDRVFLQMPSEQAA
GLYAGQYVHSSFSGYLLYPM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttccctgacccctctacagctcctgggagtggtgatcctcatttacctcagt
ttcatcaggttcattcatggcggtgcctattatgggatcaaacagcttccacctcaaatc
ccacctcagattccccaataccagcccctgggacaacaagtacctcacatgcccttaggc
aaagatggccttcccatgggtaaggagatgccccacatgcagtatggcaaagaataccca
cacctaccccagtatatgaaggaaattccacaggtgcccaggatgggcaaggaggcagct
cccaagaaaagcaaagaaataccattagccagcttaagaggagaacaaggtcctcgtggt
gaacctggcccaagaggacctcctggacctccaggtataccaggccatggaataccagga
atcaaaggaaagccagggccacagggctacccagggattggcaaaccaggtatgcctgga
atgccaggaaaacctggaggcatgggaatgcctggggcaaaaggtgaaataggaccaaaa
ggagaaattggacctatgggaatgccaggaccacaaggacctccagggcctcatggactt
cctggtgttggaaagccaggtggtccagggttaccaggacaaccaggaccaaagggtgaa
ccaggacccaaaggacagccaggacttcctggtcttcaaggccctaaaggagaaaagggc
tttgggatgccaggtttgccaggacttaaaggtccccctgggatgcatggacctcctgga
cctgtggggcttccaggaataggcaaaccaggggtgacaggattcccagggccacagggt
cctcttggtaaaccaggccttcaaggtgaaccaggaccccagggccctataggtgtacct
gggattcaaggaccacctggtgtacccggagttggaaagccaggtcaggatggcatccct
ggacgacctggatttcctggtggtaaaggggaacaaggactacccgggttgccaggacct
cctggccaaccagggattgggaaaccaggtttcccagggtctaaaggtgaccgaggtata
gggggtcttcctggggctcttggacctagaggagagaaagggccaataggtgcacctgga
atgggcgggcctccaggtgagccaggcctgcctggaattccaggtcccatgggaccacca
ggtgctattggtttcccagggcccaaaggagaagggggagctatggggccacaaggacca
ctgggtcccaaaggtgaaccagggttacagggtttcccagggaaaccaggcttccttggt
gaagtgggacccccaggcatgagaggtttgccaggtccaatcggacccaaaggggaagcg
gggcataaaggtttaccaggtatccctggagctcctgggctcattggacccaaaggagaa
ccaggaatcccaggtgaccaaggtttacaaggcccatctggaattccaggaattggagga
ccaagtggtcccattggacctcctggaatcccaggccccaaaggagaaccagggctacca
ggtcctcctggattccctggggtaggaaagcctggggtagcaggactgcatggaccccca
gggaagcctggggctcttggtcctcaaggccagcctggccttccaggacccccaggacct
ccaggtcccccaggtcctccagctgtgatgcctcccacaccaccagcccatggagaatat
ttgccagaaatggggccagggattgatggagtgaaaaccccccatgcctatgggggcaaa
aaaggcaaaaatggaggtgtagcttatgagatgcctgcatttacagctgagttgaccacg
cccttcccaccagtgggggccccagtaaagtttgacaaactgctctacaacggcagacag
aactacaacccacagactggcatcttcacctgtgaagtccctggtgtctactactttgca
taccatgtccactgcaaagggggaaatgtatgggtggctttgttcaaaaacaatgaccca
atgatgtacacttacgatgagtacaaaaagggctttctggaccaggcgtcagggagtgct
gtgctacagcttagacccggagatcgggtttttctccagatgccctcagagcaagctgca
ggactctacgctggacaatacgtccattcctctttttcaggatatttattgtatcccatg
taa
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