KEGG   Monodelphis domestica (gray short-tailed opossum): 100018808
Entry
100018808         CDS       T01031                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3a subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100018808 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdo03041]
    100018808 (SF3A1)
Spliceosome [BR:mdo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100018808 (SF3A1)
 Complex B
    100018808 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    100018808 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 100018808
NCBI-ProteinID: XP_001365265
Ensembl: ENSMODG00000009270
UniProt: F7DA32
LinkDB
Position
3:complement(519410492..519429824)
AA seq 791 aa
MPAGPVQAVPPPPPVATEPKQPSEEEASKEDSTPSKPVVGIIYPPPEVRNIVDKTASFVA
RNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQ
QASQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQF
LTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVLD
QVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTP
EELGARILIQERYEKFGESEEVEMEVESDDEDEKQEKTEEPPSQLDQDTQVQDMDEGSDD
EEESQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIP
ASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEE
TAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDS
KEKIGPSKPNEIPQPPPPSSAPNIPTSAPPITSVPRPPSMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APTPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVTIKVQVPNMQDKTEWKL
NGQVLVFTLPLPDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgccggcaggaccggtgcaggcggtgccaccgccgccgccagtcgccacagaacccaag
cagccctcagaagaagaagcttccaaggaagattcaaccccttccaagccagttgtggga
atcatctacccgcctcctgaggttaggaatatagtggataagaccgccagctttgtggcc
agaaatggccctgaatttgaagctcgaattcgacaaaatgaaatcaacaatcccaaattc
aacttcctcaaccctaatgacccgtaccatgcctactaccggcacaaagttagtgaattc
aaggaagggaaggcacaggagccctcggccgccatccccaaggtcatgcagcagcagcaa
caggcctcccagcagcagctgccccagaaggtccaagcccaggtgatccaggagaccatc
gtgcccaaggagccccctccagagtttgagttcattgccgaccccccctccatctcagcc
tttgacctggatgtggtgaagctgactgctcagtttgtggcccgcaatgggcgccagttc
ctgacccagctgatgcagaaggagcagcggaactaccagtttgactttctacgtccccag
cacagtctcttcaactacttcaccaagctggtggaacagtataccaagatcctgattcca
ccaaaaggcttatttacgaaactcaagaaggaggcagagaaccccagagaagttctggat
caggtgtgttaccgtgtggagtgggccaagttccaggagcgcgagaggaagaaggaggag
gaggagaaagagaaggaacgggtggcctacgcacagattgactggcacgactttgtggtg
gtggagacggtggacttccagcccaatgaacaaggaaacttcccaccacctaccacgccg
gaggagctgggcgcccgaatcctgatccaggagcgttatgagaagtttggggagagtgag
gaagtggaaatggaggtggagtcggatgatgaagacgagaagcaggagaagaccgaggaa
cccccatcccagctggaccaggacacccaagtgcaggacatggacgagggttctgatgat
gaagaggagagccagaaagttcctcctcctccagagacacccatgcctccaccactgcca
cccacccccgatcaggtcatcgtccgcaaggactatgaccccaaagcttccaagcccctg
cccccagccccagctccagatgagtatctcgtgtcccccatcaccggggagaagatccca
gccagcaagatgcaagaacacatgcgcattggcctgctggacccgcgctggctggagcag
cgggatcgctcaatccgcgagaagcagagtgacgacgaggtctatgccccagggctggat
atcgagagcagcctgaagcagctggccgagcggcgtaccgacatcttcggtgtggaggag
acggccatcggcaagaagatcggcgaggaggagatccagaagcctgaggagaaggtgacc
tgggatggccactctggcagcatggcccggacccagcaggcagcccaggccaacatcact
ctccaggagcagatcgaagccatccacaaggccaaggggctggtgccagaagacgacagc
aaggagaagatcggccccagcaagcccaacgagatcccacagccgccccctccgtcctca
gcccccaacatccccacctcggcccctcccatcacgtctgtgccccggccaccctcgatg
ccacctccggtccgaaccacagttgtctctgccgtacccgtcatgccacgtccccccatg
gcctccgtggtccgcctgcctcctggctccgtgattgcccctatgcctcccatcatccat
gctcctcgcatcaatgtggtgcccatgccaccctctgctccacccatcatggcaccgcgt
ccacctcccatgattgtgccaacagcatttgtaccggcccctcctgtggctccggtccca
gcacccaccccgatgcctcctgtccaccccccaccacccatggaggatgagcctgcttct
aagaagctgaaaacagaagacagcctcatgccagaggaagagtttctccggaggaacaag
ggtccagtcaccatcaaggtccaggtcccgaacatgcaggacaagactgaatggaaactg
aacgggcaggtgctggtcttcaccctcccgctgccagaccaggtctccgtcatcaaggtt
aagatccacgaggccaccggcatgcctgctggcaaacaaaagctgcagtatgagggcatc
ttcatcaaagactccaactccctggcatattacaacatggcgaatggtgctgtgatccac
ctggcactcaaggaaagaggcgggaggaagaaatag

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