Monodelphis domestica (gray short-tailed opossum): 100019306
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Entry
100019306 CDS
T01031
Symbol
U2SURP
Name
(RefSeq) U2 snRNP associated SURP domain containing
KO
K12842
U2-associated protein SR140
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100019306 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100019306 (U2SURP)
Spliceosome [BR:
mdo03041
]
Complex A
U2 snRNP components
U2 related factors
100019306 (U2SURP)
Complex B
100019306 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
100019306
NCBI-ProteinID:
XP_007502159
Ensembl:
ENSMODG00000021242
LinkDB
All DBs
Position
7:complement(216924861..217007068)
Genome browser
AA seq
1030 aa
AA seq
DB search
MADKTPGGSQKSSSKARSSDTVHSSGSSDAHMDAAGPSDTDMPSRTRPKSPRKHNYRTES
TRESLCDSPHQNLSRPLLENKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYEE
FLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNAPNQSSNERP
PSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSD
GQRRSMDAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKSKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPETFLIRLQNIFLGLVNIIEEKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKSLDDDLDGVPLDTSEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKSSIKYSEMSEE
KRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDK
KDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRAKSPSPKSERSERSER
SHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHR
SHKKSKKSKH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcggctcgcagaaatccagttcaaaggccagatcatcagat
actgtacattcatctggctcttcagatgcacatatggatgcagctggaccttcagataca
gatatgccaagtcggacacgacctaagagcccgaggaaacacaattataggacagaaagt
acccgtgagagcctttgtgattctccccatcaaaatttgtcaaggccacttctggaaaac
aagctcaaagcatttagcattgggaagatgagtgctgctaaaagaactttgagcaaaaaa
gaacaagaagaattgaagaagaaggaggatgagaaggctgcggctgagatttatgaagaa
ttccttgctgcttttgaaggcagtgatggtaataaagtgaaaacatttgtgagaggtggt
gtggttaatgctgctaaagaagaacacgaaacagatgaaaaacgaggcaaaatttataag
ccatcctcaagatttgcagatcaaaagaatgcaccaaatcagtcttccaatgaaaggcca
ccgtcccttcttgtgatagaaactaaaaaacctccactgaagaaaggggagaaagaaaag
aaaaagagcaatttggaactcttcaaagaagaactaaaacaaattcaagaagaacgtgat
gaaagacataaaacaaaaggcaggctaagccgttttgaaccccctcagtcagattcagat
ggccagcgtcgttctatggacgcaccttcccgaagaaatagatcatctgtcctagatgac
tatgcacctggctcacatgatgtgggggatccaagtactacaaatttataccttggaaat
attaacccacagatgaatgaagaaatgttatgccaagaatttgggagatttggaccgtta
gccagtgtcaaaattatgtggccaagaacagatgaggaaagagcaagagaaaggaattgt
ggttttgtggcctttatgaatagaagagatgctgagagagctttgaaaaatctaaatgga
aagatgatcatgtcctttgaaatgaaactagggtggggtaaagccgtacctattccacca
catccaatatacattccaccttctatgatggaacatactctcccccctccaccatccggc
ctgcctttcaatgctcagcctagagagagattaaagaatcctaatgctccaatgttacct
ccacctaaaagcaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgcactgatacatcgaatgatagagtttgttgtacgt
gaaggaccaatgtttgaagctatgatcatgaatagagaaatcaacaatcctatgttcagg
tttttatttgaaaaccagactccagcccatgtttactatagatggaagctttattcaatt
ctacagggggatgctccaactaagtggagaacagaggattttcgtatgttcaaaaatgga
tctttttggagaccaccaccattaaatccatacctgcatgggatgtcagaagagcaagaa
actgaagcatttgttgaggaacctagcaagaaaggagcacttaaagaagagcagagagac
aaattagaagaaatcttacgtggactaactcctcgaaaaaatgatattggtgatgcaatg
gttttctgtcttaataatgctgaagctgctgaagaaattgtggattgtattactgagtca
ctgtccatcttgaaaacaccactacctaagaagattgccagattatatttggtttctgat
gtgttgtataattcttcagcaaaagttgccaatgcttcatattatagaaaattttttgaa
acaaagttatgtcagatattttcagacctcaatgccacctaccgtacaattcaaggccac
ttacaatctgaaaacttcaagcaaagagtaatgacctgcttcagagcatgggaagactgg
gcaatttatccagaaacatttttgatcagattacaaaatatatttttgggacttgtaaat
attattgaagaaaaagaaacagaggaagtaccagatgatcttgatggtgcccccattgag
gaagagctggatggtgcacctttggaagatgttgatggaattcctattgatgccactccc
attgatgatcttgatggagtccccataaagtcacttgatgatgatctcgatggtgtgcct
ttggatacctctgaagattcaaaaaagaatgagcctatttttaaagtggccccatccaaa
tgggaagcagtagatgaatctgaattggaagcacaggcggtaacaacatctaaatgggag
ttatttgaccagcatgaagaatcagaagaagaagagaatcaaaatcaagaagaagaaagt
gaagatgaggaagatactcagagctccaaatctgaagagcatcatttgtattccaatcca
atcaaagaagaaatgacggagtccaagtcttctattaaatattctgaaatgagtgaagaa
aaacgagctaagcttcgagaaatagagctcaaggtgatgaagtttcaggatgaattggaa
tctgggaaaagaccgaaaaaaccagggcagagctttcaagaacaagtggaacactacaga
gacaaacttcttcaaagagaaaaggagaaggaattggaaagagaacgtgagagagacaag
aaggataaagagaagctggaatcccgatccaaagacaagaaggaaaaagatgaatgcacg
cctacaagaaaagaaaggaaaaggcgacatagtacatcacccagtccatctcggagcagt
agtggtaggcgagctaaatccccatctccaaaatcagagcgatcagagcgatcagagcgg
tctcacaaagagagttcacgttccagatcatctcacaaagattctcctagagatgttagt
aaaaaggccaaaagatcaccatctggttcaaggacacctaaaaggtctaggcgatcacga
tctaggtcccctaaaaaatcagggaagaaatccaggtctcagtctcgatctccacacaga
tctcacaagaagtcaaagaaaagcaaacactga
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