Monodelphis domestica (gray short-tailed opossum): 100019492
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Entry
100019492 CDS
T01031
Symbol
ATRX
Name
(RefSeq) ATRX, chromatin remodeler
KO
K10779
transcriptional regulator ATRX
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100019492 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100019492 (ATRX)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100019492 (ATRX)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100019492 (ATRX)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100019492 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100019492
NCBI-ProteinID:
XP_007507500
Ensembl:
ENSMODG00000003920
LinkDB
All DBs
Position
X:complement(55912103..56101796)
Genome browser
AA seq
2469 aa
AA seq
DB search
MAALKPNESKLNTLVQKLHDFLAQSSEESEEAHSPPRLTMSKVIDKGSRSGNTSDPMEVI
REEGSTSSEKAKSLGPHRSKRKPTVVTKYVGSDEEKVFDDTLNPDVSIDTSETDIAMQSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRSKMKTESLKKRGEEGLHGIVSCTACGQQVNHF
QKDSIYRHPTLKVLICKNCYKYYMSDDISRDADGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSAIMDENNQWYCYICRPEPLLDLVTACDSVFENLEQLLQQNKKKIKVE
SEKSNKLFEHSHKFSPKKNVSTCNGEEKKVDDSHSGSVTYSFTALMVPKEIVKKTKKLVE
TTTSMNASFARFLKQASENSEMSTVVKLRQLKAFKSVLNDIKKVHHSLEEGVNMEIRALD
TLNKETVTMEHKADILKPETEVTKLEVYYESKKKDFSKCDNKLSMKRVGSEMVGQSLPVV
GQPANKSAGAEDKKSNRKEARFEPANTSEALDMDIVSVPSSVPEDIFENPEAAMEVQVSS
ENQRDGNNATERDVEHSVKSKDHKGGTKFKISAKVTKELYVKLTPVSLSDSPVKAADCQE
ATQEKEENKSSVTSKAENRSSQKERSCDEDFVENDIPLVSEEADLRRSPRVKTTPLRRQT
EANPITSNSDEENNDVYNEKRKRKSLVQSVKKDKRTSSDSAIDSPKPTKVPKCKPLDTVA
PSSDSEEIPAVLKEVAMMSHSSSDTEQNETNENVPKKSLYDIKTQTSKGDKGKRKRKNST
SGSEFDTKKGKAVKSFTGSKKKRHSHSESSNYDSELEREIKNMCKIGAAKQSQKRHSNKE
DYGSSEDEKQNAKGSSKQKKKGTKTLINESSDDDGEDRQKNSCFSEDTVNKESMSSQLRE
PVTKKDAATSSDVHKSYVKEEVCSSPETCKEAEAIEQSRHLKSKPMKKDSSFDDVTEKSS
QKEECGDSSEDEKKQKKRRIETKEKKSSELKKFPSQENEVTSSDIIEKSLEREDSSHLTE
DFDQNKQGSAEAEKKNKKLREKNSKKKEELSDDIEKLTGKSESGDYSEGKKGLSGRERKK
ENLGEKSSKTVHYGSSSDVEKCLPKEECCDSSDEKRRKRIESRERRNLSAKINIKAKQSG
SSSSEAEESFSEDSKRKKKIPLTKNKKKENVKDKKKKSPRRNGKKQQEIISSSSDELGDD
DQNSTGEGSGDEQKIKPVTEDITLPSNVHSSGDEADRRDPVNVDDDEDEDDPENRIAKKM
LLEEIQANITTDEDASSDEEPTKMKKRSAKQNEENTGDESEPQKEHNVEHDEHGNSDTDS
DSEQSKKPRYRHRLLRHKLSGSDGESGEEKKSRPKETKETKRRNRRKVSSEDSVDTDFQE
SGVSEEVTESEDDQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEED
ENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIED
ASPIKCPITTKLVLDEDEETKEPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVSKTKKS
AGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQDGL
DDEEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFN
KALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFI
KENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTK
FLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKLFQDFQMLSRIWTH
PWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKSKGKKGKKDSSSS
DSCSDNDVEVIKVWNSRSRGGGDGSVEEIPNISAVSFKQEESKTASSSNPSSPAPDWYKD
FVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELASREKSDD
KDKPLIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGI
NLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQVTKQS
LSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIH
KEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNMPTGTTLPPVNFNS
QTPYIPFNLGALSTMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIISAVWKENMNL
TEAQVQALALNRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQ
QMSYQQAALSHHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGLQPPPLQRAPPPMRSKN
PGPSQGKSM
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctaaaacctaatgaaagcaagttgaatacattggtgcagaaacttcatgac
tttctggcacagtcttctgaagaatctgaagaggcacattctcctccaagactgactatg
agcaaggttatagataaaggcagtaggtctggaaatacttcagatccaatggaagtcatc
agggaagaggggagtacctcttcagagaaagccaaatctttaggaccacatcgttcaaaa
aggaagcctacagttgtaacaaaatatgtaggatcagatgaagaaaaagtatttgatgat
actctaaatccagatgtttccattgacacttcagaaactgatatagctatgcaaagcttg
cctaaaggtacagtggttgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaagtctcaaaaaacgcgga
gaagaaggtctgcatggaattgttagctgtacagcttgtggacagcaagtgaaccatttc
cagaaggattcaatttatagacaccctacactgaaagtcttgatttgtaagaattgctac
aagtattatatgagtgatgatattagtcgtgatgcagatggaatggatgaacagtgtaga
tggtgtgcagaaggtggaaacttgatttgttgcgacttttgccataatgctttctgcaaa
aaatgcattttgcgcaacttaggtcgaaaggagttgtctgcaataatggatgaaaacaac
caatggtattgctacatttgccgtccagagcctttgttggacttggtcactgcatgtgat
agtgtatttgagaatttagaacagttattacagcaaaacaaaaagaagataaaagttgaa
agtgaaaaaagtaataaattatttgaacactcgcacaagttttctccaaagaaaaatgtt
tcaacttgtaatggagaagaaaagaaagtggatgattctcattctggaagtgtaacttac
tcttttacagcactaatggtgccaaaagaaattgttaaaaagacaaaaaagctggttgag
accactacaagcatgaatgcgagttttgcaagatttttgaaacaggcctctgaaaattca
gaaatgagcacagtagtaaagttacgccaacttaaagcttttaaatctgtgctgaatgat
atcaagaaggtccatcattcattagaagaaggagtgaatatggagattcgtgctttggat
actttaaataaagagactgttaccatggagcataaagctgatattcttaaaccagaaact
gaagttacaaaattagaagtatactatgagtctaaaaagaaggacttttcaaaatgtgac
aataaattatcaatgaagcgagttggaagtgaaatggttggtcagagtcttccagtggtg
gggcaaccagcaaataaaagtgctggtgctgaagataagaaatctaatagaaaagaagct
cgctttgagcctgccaacacttctgaagccttagatatggatattgtttctgttccttct
tcagtccctgaagatatttttgagaatcctgaagctgctatggaagttcaggtttcatct
gaaaaccaacgtgatggcaataatgctacagagcgagatgtagagcattctgtaaaatca
aaagaccacaaaggaggtaccaaattcaaaatatcagctaaggtaacaaaagaattgtat
gttaaactcactcctgtttccctttctgattctccagtaaaagctgctgattgtcaggag
gcaacacaagaaaaagaagaaaacaaaagttctgttacttctaaggcagaaaaccgtagc
tctcaaaaggaaagaagttgtgatgaggattttgttgaaaatgacattccattagtttca
gaagaagctgaccttcgaagatccccacgtgtaaagactacccctctaaggcgacagact
gaagccaaccctatcacatccaattcagatgaagaaaataatgatgtgtataatgaaaaa
cgtaaaagaaagtcattagtgcagtcagtaaaaaaggataaacggacttcttctgatagt
gccatcgacagtcctaaacctactaaggtgcctaaatgtaaaccattggacactgtggct
cctagttcagactctgaagaaattcctgcagttctcaaagaagttgctatgatgagtcac
agttcttctgatactgaacagaatgaaacaaatgaaaatgttccaaagaagtctctgtat
gatataaagactcaaacatccaaaggtgacaaaggaaagagaaaaaggaaaaattctact
tctggttctgaatttgatacaaagaaaggcaaagcagttaaaagcttcacaggttctaaa
aagaaacgccatagccattcagaatcttccaattatgattctgaattagaaagagagata
aagaatatgtgtaaaattggagctgccaaacaatcccaaaaaagacattcaaacaaagag
gattatggttcttctgaagatgaaaagcaaaatgcaaaaggatcgagcaaacaaaagaaa
aaaggtacaaagactttaataaatgaatcatctgatgatgatggagaagacagacaaaag
aattcttgcttttcagaagatacagttaataaagaaagtatgtcctcacaactaagagaa
ccagtaactaagaaagatgcagcgacatcatctgatgttcacaaaagttatgtgaaagaa
gaggtttgctcttctcctgaaacctgtaaggaagcagaagctattgaacaaagtcgtcat
ctgaaaagcaaacctatgaaaaaggatagttcatttgatgatgttactgagaagtcctca
caaaaagaggagtgtggggactcttctgaagatgagaagaagcagaagaaaaggagaatt
gaaacaaaagaaaagaaatcttcagaactgaaaaagtttcctagtcaggaaaatgaggtg
acatcatctgatattattgaaaagtcacttgagagagaagatagttcccatttgactgaa
gattttgaccaaaataagcaaggttcagctgaagcagaaaagaaaaataaaaagttaaga
gagaaaaactctaaaaagaaggaagaattatctgatgatattgaaaagttaacagggaaa
agtgaaagtggtgattattctgaaggtaaaaaaggattatctggtagagaaaggaaaaag
gaaaacttaggggagaaaagttcaaagactgttcactatggttcatcttctgatgttgag
aagtgtctcccaaaagaagagtgttgtgattcttctgatgaaaagagaaggaaaaggata
gagtctcgggaaaggagaaatctaagtgcaaaaataaatatcaaggcaaaacaaagtggc
tcatcatcttctgaagcagaggagtcattttctgaggatagcaaacgaaaaaagaaaata
cccctgacaaagaataagaaaaaagaaaacgtaaaagacaaaaagaagaagtcccccaga
agaaatggtaaaaagcagcaagaaattattagttcttcttctgatgaattgggagatgat
gaccagaattccacaggcgaggggagtggtgatgagcagaaaattaagccagtgacagaa
gacataacactaccttcaaatgttcattcttcaggtgatgaagctgacagacgagatcct
gtcaatgtggatgatgacgaagatgaagatgatcctgagaatagaattgccaaaaagatg
ctcttggaagaaatccaggctaatattaccactgatgaggatgcatcttcagatgaagaa
ccaactaaaatgaaaaaacgatctgcgaaacaaaatgaagaaaacacaggtgatgagagt
gagccacaaaaagagcataacgttgagcatgatgaacacggcaactctgataccgattct
gactctgaacaatccaagaaacctcgatatcggcacagactcttacgtcacaaactgtcc
gggagtgatggagagtcaggagaagaaaagaagtcaaggcccaaagagacaaaggaaacc
aaacgcagaaataggaggaaagtgagcagtgaagattctgttgatactgattttcaagaa
tcaggggtaagtgaagaagtgactgagtctgaagatgatcagcgccctagaacaagatca
gcaaagaaagcagagcttgaagaaaatcaacggagctataagcaaaagaagaaaagacga
cgcattaaggttcaagaggattcttcaagtgaaaataagagtaattctgaagaagaagat
gaaaatgatgattccaagtctcctggaaagggaaggaagaaaattcgaaagattcttaaa
gatgacaaactgagaactgaaacacaaaatgccttgaaagaagaagaagagaggagaaaa
cgtattgcagagagagaacgggagagagagaagttaagagaggtaatagaaattgaagat
gcctcacctatcaaatgtcccattacaacaaaattagttttagatgaagatgaggaaacc
aaagaacctttagttcaggttcacagaaacatggtaaccaagttgaaaccccatcaagta
gatggtgttcagttcatgtgggattgctgctgtgaatctgtgagtaaaaccaagaaatct
gcaggttctggatgcattctcgcccactgcatgggtctgggaaagacattacaggttgtg
agttttcttcatacagttttgctatgtgacaaattggattttagtacagctctggtggta
tgtcccctcaacactgcattgaactggatgaatgaatttgaaaaatggcaagatggatta
gatgatgaagaaaaacttgaggtctcagaattagctactgtgaaacgtcctcaggagaga
agctacatgctgcagagatggcaggaagatggaggtgtcatgattatcgggtatgaaatg
tatcgaaatcttgctcaaggaaggaacgtcaagagtaggaaactaaaagaaatatttaac
aaagctcttgttgacccaggtccagactttgtcgtttgtgatgaaggccacatattgaaa
aatgaagcctctgctgtttcaaaagccatgaattccattcgatccagaaggaggattatt
ttaacgggaacacccttacagaataacctaatagagtatcactgcatggttaattttatc
aaggagaatttgcttggttccattaaagaattcagaaatcgattcatcaatccaattcag
aatggtcagtgtgcagactccaccatggttgatgtcagagtgatgaaaaagcgggcccac
attctctatgaaatgttagctggatgtgtgcagagaaaagattatacagcactaacaaag
ttcctgccaccaaagcatgaatacgttttagctgtaagaatgacacctattcagtgcaag
ctttatcagtactacttagaccacttaacaggtgttggtaatagcagtgaaggtggaaga
gggaaagcaggagcaaaacttttccaggacttccagatgttaagcagaatctggactcac
ccctggtgtttgcagctggattatataagcaaagaaaacaagggatattttgatgaagac
agtatggatgaatttatagcttcagattctgatgaaacctcaatgagtttaagctccgac
gattatactaagaaaaagaagtcaaagggaaagaaagggaaaaaggattctagctcaagt
gacagttgcagtgataatgatgtagaagtgatcaaagtatggaattcaaggtcacgagga
ggtggagatggaagtgtggaggaaatacccaatatctctgcagtttcttttaaacaggaa
gaaagtaaaacagcttcctcttccaacccaagcagcccagctccagactggtacaaagac
tttgtgactgatgctgatgctgaggtcttagaacattcgggcaaaatggtgcttctcttt
gaaattctgcgcatggcagaggaacttggagacaaagttctcgtttttagccaatctctc
atatcattggacttgattgaagattttcttgaattggctagtagggagaaatcagatgat
aaagataagcctcttatttataaaggggaggggaaatggtttcgaaatattgactactat
cgtttggatggctcaactactgcgcagtcaaggaagaaatgggctgaagagtttaatgat
gagacaaatgtgagaggccgactgtttatcatttctaccaaagcaggatctcttggaatt
aatctggtagctgctaaccgagtgatcatcttcgatgcctcctggaatccatcctatgac
atccagagcatattcagagtttatcgcttcggacaaaataagcctgtgtacgtctatagg
ttcttggctcagggaactatggaagataaaatctatgatcgtcaagtcaccaagcagtct
ttatctttccgtgttgttgatcaacaacaagtagagcgtcattttactatgaatgagttg
actgagctttatacttttgaaccagacttattagatgatccaaattccgaaaaaaagaag
aaacgggatactcccatgctgccaaaggacacaatccttgcagaattgcttcagatacat
aaagaacatattgtaggatatcatgagcatgattctcttttggaccacaaagaggaggaa
gagttgactgaggaggagagaaaggcagcttgggctgaatacgaagctgaaaagaaggga
ctcaccatgcgtttcaacatgccaactgggaccactttacctcctgtcaatttcaactca
caaaccccgtatattcctttcaatttgggagccctgtcaacaatgagtaaccaacagctt
gaggacctcattaatcaaggcagagagaaagttgtagaagcaacaaacagcgtgacagca
gtgaggattcagcccttagaagacatcatttcagctgtatggaaggaaaacatgaatctg
acagaagcccaagtgcaagctttggcattaaatagacaagccagccaggagcttgatgtg
aaaaggagagaagcgatctacaatgatgtattgacaaaacaacagatgttaatcagctgt
gttcagcggatcctgatgaaccggaggctccagcagcagtacaatcagcaacagcagcaa
cagatgtcttatcaacaggccgccctgagtcaccacctcatgatgccaaagcctcccaat
ttaatcatgaatccttccaactaccagcagattgatatgagaggaatgtatcagtcagtg
gccggcggcctgcagcctccgccactgcagcgcgcaccgcccccgatgagaagcaaaaat
cctggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
