Monodelphis domestica (gray short-tailed opossum): 100020187
Help
Entry
100020187 CDS
T01031
Symbol
SYNM
Name
(RefSeq) synemin
KO
K10376
desmuslin
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mdo04812
]
100020187 (SYNM)
Cytoskeleton proteins [BR:
mdo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
100020187 (SYNM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
100020187
NCBI-ProteinID:
XP_001372782
Ensembl:
ENSMODG00000012752
LinkDB
All DBs
Position
1:137330272..137370830
Genome browser
AA seq
1262 aa
AA seq
DB search
MLHWRLLGGDEKAQLQELNARLYEYVSRVRQLEQENQHLLDELHNRRGEEDWWAAWQGRY
QAEVSSLRRQLEELSWDKSLAEGERVSLWRELQDLRLLSEEACAIRGQLDAELGAQRSQL
KEALGARAALEALLGSLQDEHQRLLEGHARDVRELREQVSTFSMQFRARQPPRESQLSLQ
EVQDSYALLVSESWQETFQLYQDKVRELEEKVRLGHESRQEAEEEKRRFQLEVESLHREA
QELDQLRQRLEEELLRMREKYDLEMEENQRVIDFLEDEKQNLTMTITDRLKDYQELLQVK
TGLNLEVATYRALLEGERNPEILVWTEHIQNVPREVRNTSYQHANSILQRENKRNIYSRE
KITSSDKNISAPYSNRSTFFGPQSTLVTRSDFLGPSYSSSSTRRQETSYERTARDHSRLG
TPPTTCGLLRSGESQVKVIPDRQKTESTSRITTYLTKESTSAQRQSPQHKDIRMSTSVST
QSQERSVLQGKKTEERKYKLEPTKARQEEKMFDSKEKASEERNLRWEEMTKLDKEARERE
SLQLKGKGKGNESVKERTTIFGEKREIQIPVSFEGHGHGKASQDNKVELVVKDIQTVQKK
GVSESKTKWTEERGLKFKVDASDAADSTKDDSTRKTIAENIVSSILQQFVQPSDLETSAG
PPLDTKVTYVERKELPGVGKAKTEIVVESKLLEEIDVSDEDSLKHLLSKGAKEVEIKGKS
AESMIGDIINLGLKGREGRAKVVNVEIVEEPLGYVSDEKADFSTPFEVEEVDDISPGFQR
HFSDEEGDEETSITFSRNQLTKTKQPRENLTHFEEVTEASDSEGEQRYFVSTPDEYPGGY
DKEEDSVYGQIHVEEESTIKYSWQDEVSQSTEKRRKRNNLPGDEFSSPSEVFSPEEDVDS
SPLKVHLKGDEVHAESTVTEKEIKIPHEFQTSIKGLFSKDPKHQLVEAIGQLEGSLPESV
REDLSVLAKESQKDSGNISVKKFEKTTDGGSVTIVAEVNLSETLDANQLDLEQLSKEGSS
KVEKTLQSAVLASSQKHYVQEPESPDSKHGLEVSGPSIKSKRWTSTEIYSSSERDGGGGG
HYTAEHVFQQGPVSATVEVSSPRGFAQSHILEDINQSVQHIKIGPTEIRRTEQIFYEGPT
SQVVEMDVSNREESPSTSRSTQETTIFFSPRKEAKIHIVSDDGEWKDNERRKDKEASMGF
QASAAQEYQVHGEQVTEKAMFDKTVQLQRMVDQRSVISDEKKIALLYLDKEEEEEENDGH
WF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgctacactggaggctgttggggggagatgagaaagctcagcttcaggagctcaacgcc
cgcctctacgagtatgtgtcccgggtgcggcagctggagcaggagaaccagcatctcctg
gacgagctacataatcggagaggagaggaggactggtgggcggcatggcagggacgatac
caggcggaggtaagcagcctgaggcggcagctggaggagcttagctgggacaagtccctg
gcagagggggagcgggtcagcctgtggcgcgagctgcaggacctacgactgctgagcgag
gaggcgtgcgccatccgaggccagctggacgccgagctaggtgcgcagcggagtcaactg
aaggaggccctgggcgctcgggcggctctggaagcgctgcttggcagtctgcaggacgag
caccagcgcctgctggaggggcacgcccgggacgtgcgggagctgagagagcaggtgtct
accttctctatgcaattccgcgctcgccagcctccccgggagtcccagctcagtctgcag
gaggtgcaggacagctacgctcttctggtgtctgaatcatggcaggaaactttccagctg
taccaggacaaggtgcgcgagctagaggagaaggtgaggctggggcacgagagtcggcag
gaagcggaggaggagaaacgacgctttcagctcgaagtagaatccctgcaccgggaggcc
caagagttggaccagctgcgccagaggcttgaggaagagctcctaagaatgagagagaag
tacgacctggagatggaagagaatcagagagtaattgacttcctggaagatgaaaagcag
aatttgaccatgaccatcacagatagactaaaggactatcaggaactattacaagtgaaa
acgggcctaaatcttgaagttgcaacttaccgagccttactggaaggagaaagaaatcca
gagatactagtatggactgaacacatacagaatgttccacgagaagtcaggaatacatca
taccagcatgccaattcaattttacaaagagaaaacaaacggaatatatactccagagag
aaaataacctcatctgataaaaacatctcagcaccatactcaaaccgatcaacattcttt
ggacctcagtctactctagtgactagaagtgatttcctgggtccaagctattcttcctct
tccactcgaagacaagaaacctcatatgaaaggactgcaagagatcatagtagactcggg
acacctcctacaacatgtggccttttgagaagcggagaatctcaggtgaaagtgattcct
gacaggcagaaaacagaaagtacaagtagaatcaccacatatttaaccaaagaatcgaca
agtgctcagagacagagcccacaacacaaagatataaggatgagtacgtctgtaagcact
caatcacaagaaaggagtgttcttcagggaaagaaaacagaggagagaaaatataaacta
gaaccaactaaagcaagacaagaggagaaaatgtttgactctaaagaaaaggcttctgaa
gaaagaaatttaagatgggaagaaatgactaaactagataaggaagcaagagaaagggag
agtctgcagttgaagggaaaaggcaaaggaaatgaatcagtcaaggagagaactacgata
tttggagaaaagagagaaatacagatacctgttagttttgagggacatggacatggaaaa
gcatctcaagataacaaagtagaattagtagtaaaagatatacaaacagttcaaaaaaag
ggtgtcagtgaaagtaagactaagtggacagaagagagagggctaaagttcaaagtagat
gccagtgatgctgctgactccacaaaagatgactccacaagaaaaaccatagcagaaaat
atagtttccagtatcctacagcagtttgtgcagccttctgacctagaaacatctgctggt
cctcctctggatacaaaagtcacttatgtagaaaggaaagaacttcctggtgttgggaag
gcaaagactgagattgttgtggagtctaaattgcttgaagagatagatgtttcagatgaa
gacagcctgaagcatctcttaagcaagggtgcgaaggaagtagagattaaagggaaatca
gcagaaagcatgataggagatataataaatcttggcttgaaaggaagagaagggagagcg
aaagtagttaatgttgagattgttgaagaaccactaggatatgtaagtgatgaaaaggct
gacttttcaacaccatttgaggtagaggaagtagatgatatctctccaggctttcagaga
catttcagtgatgaggaaggcgatgaagagacaagtatcaccttctcacgtaatcagctt
acaaagacaaagcagccccgtgagaacctaactcactttgaagaagtaacagaggcaagt
gactctgaaggagagcagagatattttgtgtctactccagatgaatacccaggaggatat
gacaaagaggaagattctgtatatgggcaaattcatgttgaggaagaatcaactatcaag
tattcttggcaagatgaagtttcacagagcacagagaagaggagaaagagaaacaacttg
cccggagatgaattttcaagtccatcagaagtcttctccccagaagaggatgtagactcc
tcccccctgaaggtacacctaaaaggtgatgaagtgcatgctgaatccactgtcactgaa
aaagaaattaaaataccccatgaattccagacctcgattaaaggactcttctccaaagat
cccaagcatcagctggtagaggcaattgggcagctggaagggagccttcctgaaagtgtg
agagaggatctgtctgtcttagctaaggagagtcagaaggacagtggcaatatttcagtt
aaaaaatttgagaaaaccactgatggtggatcagtcacaatcgttgctgaagtcaatctt
tcggaaacccttgatgcgaatcagttagatctggaacaactaagtaaagaaggttctagc
aaagtagagaaaactttgcagtcggcagttctggctagttctcaaaaacactatgtccag
gaacctgaaagcccagatagtaaacatggtctagaagtttctggtcccagtattaaatcc
aagcgttggaccagtacagaaatatacagttcatctgagagagatggtggtggtggagga
cattatactgctgagcatgtttttcaacaaggtccggtttctgcaactgtggaagttagc
agcccaagaggttttgctcaatcacacatcttagaggacataaaccagtctgtacagcat
attaaaataggccccactgaaattcggaggacagagcaaatcttttatgaaggacccact
tcacaagtggtagagatggatgtgtctaatagagaagagagccccagcacttctagaagt
acacaagaaactaccatcttcttttccccaagaaaggaagcaaaaattcacattgtttct
gatgacggtgaatggaaagacaatgaaagaagaaaggacaaagaagcaagtatgggtttt
caggcttctgctgctcaagaataccaggttcacggagaacaagtcactgagaaggctatg
tttgataaaacagtacagctgcagagaatggtagatcaaaggtcagtgatttctgatgaa
aagaaaattgccctcctctatctagacaaggaggaagaggaggaagagaatgatggacat
tggttttga
DBGET
integrated database retrieval system
