Monodelphis domestica (gray short-tailed opossum): 100021663
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Entry
100021663 CDS
T01031
Symbol
COL4A3
Name
(RefSeq) collagen type IV alpha 3 chain
KO
K06237
collagen type IV alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151
PI3K-Akt signaling pathway
mdo04510
Focal adhesion
mdo04512
ECM-receptor interaction
mdo04820
Cytoskeleton in muscle cells
mdo04926
Relaxin signaling pathway
mdo04933
AGE-RAGE signaling pathway in diabetic complications
mdo04974
Protein digestion and absorption
mdo05146
Amoebiasis
mdo05165
Human papillomavirus infection
mdo05200
Pathways in cancer
mdo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100021663 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100021663 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100021663 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100021663 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100021663 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
100021663 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100021663 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
100021663 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100021663 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
100021663 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100021663 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdo04147
]
100021663 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mdo00536
]
100021663 (COL4A3)
Exosome [BR:
mdo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100021663 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mdo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100021663 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100021663
NCBI-ProteinID:
XP_001373746
Ensembl:
ENSMODG00000021211
LinkDB
All DBs
Position
7:complement(221760379..221931589)
Genome browser
AA seq
1673 aa
AA seq
DB search
MSPGGASGRMLQLMPLTRLLLLLLLGAAPAEGKGCICRDKGPCFCDGIKGDKGEKGFPGC
PGIPGQKGLPGPEGIPGPQGPKGSPGLPGFIGSKGTRGMTGLPGFSGPPGLPGTPGNTGP
YGPPGIPGCNGTKGEQGFPGLPGTPGLQGFPGAMGLKGEKGAPAREEGIGNGGRGDPGLP
GIPGHQGLPGPPGFPGPAGPQGPPGFLGFPGEMGLPGPKGHMGIKGIGEKGDQGVKGLTG
PPGPPGAVIVTLTGLENLTDYKGDKGDKGSVGEPGPPGPKGLPGESHGSEAGTPGDPGPQ
GKPGKDGAPGFPGFPGSKGEKGFPGLNGETGVKGFKGDMGPSGFHGPTEYYNGYLEKGIK
GVPGPPGPKGARGPPGLQGPPGDVGRPGASRPGLRGTPGYPGIKGSKGERGPPGMNTIGP
PGRPGFPGTPGYKGLPGLPGPPGQVTFQDGPPGDHGDPGHLGSPGMPGAHGPKGEAGLLC
TQCTYTPGPPGLPGLPGLDGKNGIKGRQGPDGLKGSPGTPGHKGLPGFPGFPGSPGDQGL
KGEKGETSQEGEVGDRGDPGIRGDLGKKGSDGIPGKPGSKGLPGPKGEPVVNGEKGDRGF
PGNPGDPGHPGPMGPAGHSNYGPQGEPGPKGAPGVPGLPGPPGNDGPKGEPGIVNPVPGP
PGPPGLPGLPGLQGTRGNPGSMGPRGYPGLQGPDGEAGSPGTGVPGTPGQKGDKGFPGAK
GSPGCPGEMGKPGLPGIPGLPGAKGEPGTAMPGKPGKIGFQGQRGDSGENGENGLPGLPG
LPGSPGNEGPNGPPGEPGVPGPPGLNGLPGLCIPGERGTQGLPGLNGLKGPQGDSGLEGP
KGDPGIPGLDRSGSPGEPGPPGLPGHQGEKGSLGPAGQSGAPGNPGPPGQKGEVGMMGHP
GTTGLPGIPGNPGTPGHKGNLGIPGRKGKKGLPGTKGERGNKGNQGPSAISDDIGEKGEP
GPEGPLGDFGQKGERGTTGLPGLQGRDGRPGRPGLPGVRGDPGTMGDPGKPGPTGGPGSM
GHLGVPGPKGKKGTEGHPGIAGRPGLPGIQGMKGEKGEPGYTKDAQPGPPGPKGEPGPPG
SLGKKGKKGLPGPPGPVGPAGTEGDQGSSGNRGHPGQPGPAGDLGFKGCKGFPGTPGMKG
PPGPPGAPGPPGPMGEKGTQGGDAFPGPAGEKGELGLLGALPGPRGLPGLEGIKGNKGRP
GFPGIHGMKGVMGDVGPIGPPGMTGLPGPPGFPGALIPGQKGNKGLPGLRGSPGDPGPPG
PPGNHTGIKGEKGFPGDQGPTGQPGIIGDPGPPGHLGMPGTPGFPGSPGELGFQGFPGRT
GEKGNIGPPGPFGPPGSIGPKGPPGQPGGPGTIKVISLPGSPGPPGQPGEPGMQGEPGPQ
GPVGYPGLQGLRGQPGKPGKPGIPGPVGEKGNKGSKGEIGPPGSVGLPGLKGKPGNFGPP
ATGPSIRGFVFTRHSQSTEIPSCPRGTEPLYSGYSLLFVQGNERAYGQDLGTLGSCLQRF
TTMPFLFCNTNEVCNFASRNDYSYWLSTTAQMPMNMAPITGRALEPYISRCTVCEGPAMA
IAVHSQTTDIPLCPDGWISLWKGFSFVMYTSAGSEGSGQALASPGSCLEDFRANPFIECH
GRGTCNYYSNSYSFWLASLNPRRMFRKPTPSTVKAGELERIISRCQVCMKRRD
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgggggcgcatccgggaggatgctgcagctgatgccgttgactaggctgctg
ttgctgctactccttggggcggctcctgctgagggcaagggctgtatctgtagggacaaa
ggcccttgcttttgtgatggcatcaaaggtgataagggtgaaaaaggctttcccggttgt
cctggcatacctggccagaaaggattgcctggcccagaaggtatacctggacctcaagga
cccaagggctctccagggcttccgggatttattggttctaaaggcacaaggggaatgaca
ggattgccaggtttttcaggtcctccaggactcccaggcactcctgggaatactgggcct
tatgggcctcctggtataccaggatgcaatggcacaaagggtgagcaaggatttccagga
cttccagggacaccaggtcttcaagggttcccgggtgccatgggcttaaaaggagaaaaa
ggagctcctgctcgtgaagaaggtataggaaatggtggaagaggtgacccagggttacca
ggaatcccaggacatcagggtttgcctggccccccagggtttcctgggccagctggacca
caagggcccccaggatttttgggttttccaggagagatgggacttccaggaccaaagggt
cacatgggcattaagggaattggagaaaagggggatcagggtgtgaaagggttaacagga
ccccccggaccaccaggtgcagttattgtgacattgactggactggaaaatctaacggac
tacaaaggggataaaggagacaaaggatcagtgggagagccaggacccccaggaccaaag
gggctacctggagaatctcatggatctgaagctggtactcctggagaccctggccctcag
gggaaacctgggaaagatggtgcccctggtttccctggatttccaggatctaagggtgaa
aagggttttcctggattaaatggtgaaactggtgttaagggatttaaaggagacatgggc
ccatcaggatttcatggtccaacagaatattacaatggatacctggaaaaaggcatcaaa
ggagttcctggacccccgggtcctaaaggagcacgtggcccaccaggtctccaaggtcca
ccaggagatgttggtagaccaggagcctcaagacccggtcttagaggtactccaggatat
ccaggaatcaaaggaagtaaaggcgagagaggaccaccaggcatgaacacaatagggcct
cctggacgtccaggattcccaggcacaccaggctacaaggggttacctggtcttccagga
ccaccaggccaagtaacttttcaagatggtcctccaggagaccatggtgatccaggccat
ttggggtctccaggcatgccaggagcccatgggcccaaaggagaagcaggactgctatgt
acccaatgtacttatactccaggacccccaggactaccaggtttgcctgggttagatggt
aaaaatggaattaaagggaggcaaggacctgatggtttaaagggaagtccaggaactcca
ggacataaaggtctaccgggctttccaggattcccaggttctcctggtgatcaaggacta
aagggagaaaaaggtgaaacatcacaagaaggagaagtaggagatcgaggggacccaggg
atcagaggagaccttgggaaaaagggctcagatggaatccccggaaaacctggctcgaaa
ggattgccaggcccaaaaggcgaaccggttgtgaatggtgaaaagggggatagaggtttt
ccaggaaatcctggtgaccctgggcacccaggacccatgggaccagctggacattccaac
tatggaccacaaggggaacctggaccaaagggagctccaggtgtacctggacttcctgga
ccacctggaaatgatggtcctaaaggggaaccaggcatagtgaacccagtacctgggcct
ccaggtcctcctgggttaccagggctacctggcctccaaggcacaagaggaaatccagga
tccatgggaccaagaggttacccaggtcttcaagggcctgatggtgaagcaggatcccca
ggaactggagttcctgggactcctggacaaaagggggacaaaggttttccaggagccaaa
ggatcaccaggatgtccaggagaaatgggaaaacctgggttgcctggaataccaggactc
ccaggagcaaagggagaaccgggtacagcaatgcctggaaaaccaggaaaaattggtttt
caaggacaaaggggagattcaggggaaaatggagagaatggactccctggacttccaggc
cttccaggatccccaggaaatgaaggaccaaatggaccaccaggagagcctggagttccc
ggacctccaggattaaatgggcttccaggattatgtataccaggtgaaaggggaacccaa
ggacttccaggtttaaatggactaaaaggaccacaaggagacagtggcttggaaggtcct
aaaggggacccagggataccaggcttagataggtcgggatccccaggagaacctggccca
ccaggactgccaggtcatcaaggagagaaaggatctctgggtccagcaggacaatcagga
gctccaggaaatccaggtcccccaggtcaaaagggagaagttggcatgatgggtcatcct
ggaacaactggacttcctgggattcctgggaacccaggtaccccaggacacaagggtaac
ttgggaattccaggaagaaaagggaagaaaggacttcctggtacaaagggtgaaagaggt
aataaaggaaatcaaggcccatctgcaatatcagatgatataggggagaaaggtgaacca
ggaccagaaggacctttgggtgacttcggccagaaaggagagagaggtactacaggtcta
ccaggattacaaggtcgggatggaagacctggacgaccaggactgccaggagtcagagga
gatcctggtaccatgggtgaccctggaaaaccaggaccaactggaggacctggaagcatg
gggcacctgggagtaccaggcccaaagggaaaaaaaggaactgaaggtcacccaggtata
gctggcagaccaggtctccctggtattcagggcatgaagggagaaaaaggagaaccaggc
tataccaaggatgcacagccaggacctccagggccaaagggagaaccaggaccccctggt
tccttaggcaagaaagggaaaaaaggactaccaggcccaccaggcccagtaggacctgct
ggaactgaaggggaccaaggaagttctggaaaccgtggacatccaggacagcctggacct
gctggtgatttgggatttaaaggatgcaaaggttttcctggtactccaggaatgaaagga
cctccaggtcctccaggagccccaggacctcctggaccaatgggtgaaaaaggtacacaa
ggaggggatgcatttcctggtccagcaggagaaaaaggagaattaggtctgctaggggca
cttccaggtccaagaggtcttccaggtttagaaggaatcaaaggaaataaaggaagacca
ggtttccctggtatccatggtatgaaaggtgtgatgggagatgtgggaccaataggcccc
ccaggaatgacaggactaccagggccaccaggttttcccggtgcactaatcccaggccaa
aaaggaaataaaggtcttccaggcttgagaggaagtccaggtgatcctggccctccagga
ccccctggtaatcacacaggaataaagggagaaaaaggttttccaggagaccaaggtcca
acaggtcaaccaggaatcataggagaccctgggccccctgggcatctgggaatgcccggc
accccaggttttccaggttctccaggtgaacttgggtttcaaggatttccaggaaggaca
ggagaaaagggtaatataggacctccaggaccatttggacctccagggtcaattgggcca
aaaggacctcctggtcagcctggaggccctggaacaattaaagttatatccctgccaggg
agcccaggacctcctggtcaacctggagaaccaggaatgcagggagaaccaggaccacaa
ggacctgttggctacccaggccttcaaggactaagaggtcaaccagggaaacctggaaaa
ccaggaattcctggaccagttggagaaaaaggcaacaaaggatctaaaggagaaattgga
cctcccgggtcagttggattgcccggattaaaaggaaaacccggaaactttggaccacct
gcaactgggccatctatcagaggttttgttttcacccgtcacagccaatcaacagagatt
ccttcctgcccaagaggaacagaacccctttatagtggctattctcttctctttgtgcag
ggaaatgaacgagcttatggacaagaccttggaactcttggtagctgcctacaacgtttt
accacaatgccattcttgttctgtaataccaatgaagtgtgcaattttgcatcccgaaat
gactattcatattggctgtcaactacagcacagatgccaatgaacatggccccaatcact
ggcagagctctggagccttatattagcagatgtacagtctgtgaaggtcctgcaatggcc
atagcagttcacagtcagaccactgacatccctttatgtcctgatggctggatttctctt
tggaaaggattttcttttgtcatgtatacaagtgcaggctcagaaggctctgggcaagca
ctagcatcccctggttcttgcctggaagatttccgtgccaatccatttatagaatgtcat
ggcaggggaacttgcaactactattcaaattcttatagtttctggttggcttcattaaat
ccaagaaggatgttcagaaaacctactccatctactgtgaaagctggagaactagagagg
atcatcagtcgctgtcaagtgtgcatgaagagaagagactaa
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