Monodelphis domestica (gray short-tailed opossum): 100025053
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Entry
100025053 CDS
T01031
Symbol
SCAF4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100025053 (SCAF4)
03041 Spliceosome [BR:
mdo03041
]
100025053 (SCAF4)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100025053 (SCAF4)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100025053 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100025053
NCBI-ProteinID:
XP_007493279
Ensembl:
ENSMODG00000021040
UniProt:
F6W0D3
LinkDB
All DBs
Position
4:10626612..10739823
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AA seq
1081 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGATSAASVPENVTNNEGSPPPPIKVSSEPPQVTTNSVPTMPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPSKPQSPAIDNSVMAQVQAITAQLKTTTTQP
PEQKASFPQPEQKTTFDKKLLDRFDYDDEPEAAEESKKEDSSVSPSLPQPPFGFPGDGMQ
QPAYSQLPNIDPYQQRMLGVQQDPIHHQVPLPPNGQMPGFGLLPTPPFPAMAPPVIPPTP
PVQQPFQTSFQPQNEPHMQKVHQQEMEVEQPCVQESKRHVSENRKSRSRSASRSPKRRRS
RSGSRSRRSRHRRSRSRSRERRRHSPRSRSQERRERERERERRQKGLPQIKPETASVCST
TLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNY
KVNQKSIKIAWALNKGIKTDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDSETLNP
DWKGIPKKSDSEVAQNGGAETTHTEPVSPIPKALPVPVPPIPVPAPITVPPPQVPPHQPG
PPVVGALQPPTFTPPLGIPPPGFGHGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITP
PVSIPPPHTPPITIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAV
PPAAPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPL
MPPRPMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGAE
ERDGRPQQPPQQPPPQQPFRNETRQQQFNSGRDQERFGRRSFGNRVENDRERYGNRIDDR
DNSNRERREWGRRTPERDRHRDLEERRRSSGHRDRDSRERDSRRDKEENRGKEKPEVTDR
AGGDKTIEPSSSSQVGNADTISELDKGESTALNPTEELPSEATSSVDEPEKDSASGVEAS
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaagagctcttttcactcatggatatgaagcctccc
atttctcgggctaagatgattctcattactaaagctgccattaaagccattaagctttac
aagcatgtagtccagattgtagaaaagttcatcaagaagtgtaaaccagaatataaagtt
ccaggactatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaacagac
aaggatgtttttgggccaagattctctaaaaatataacagccacattccagtatttatat
ctctgtccatctgaagataagagtaaaatagttcgtgttttgaacctttggcagaaaaat
ggggtgttcaaaattgaaattattcagcctcttttggacatggcagcaggagctactagt
gctgcctcggtgccagaaaatgttactaataatgaaggttcacctccgcctccaataaaa
gtttcttctgaaccacctcaagtcactacaaattcagtaccaactatgccacagttgcca
agctcggatgcttttgcagcagtggcccagttatttcagacaactcaaggacaacagctt
cagcaaattcttcaaactttccaacaaccttcaaaaccccagtctccagccattgataat
tctgtgatggctcaggttcaagctataacagctcagttgaagactacaacgacacaacca
cctgaacaaaaagcttcctttccccaacctgagcaaaaaactacatttgataagaagtta
ttagatagatttgattatgatgatgagccagaagctgctgaagaatcaaagaaagaagat
tcttctgtttctccttctcttcctcagcctccatttggatttccaggagatggcatgcag
cagccagcatattcacagcttccaaatatagatccatatcagcagagaatgttgggagta
cagcaagatccaatacaccaccaggtcccacttcctcctaatgggcaaatgccaggattt
ggattacttcctacacctccatttcctgctatggctccacctgtgattcctccaacacca
ccagtgcaacaacctttccaaacttcgttccagccgcaaaatgagccacatatgcagaaa
gtacatcagcaggaaatggaagtggagcaaccttgtgttcaggaatctaagcggcatgtc
tctgaaaacagaaagtcaagatctaggtcagcatcaaggtcacccaaaagaaggagatca
aggtctggttctagatctcgaaggtcccgtcatagacgttctcgttcccgttcccgagag
aggcgtcggcattctccccgatcccgatcccaggagagaagagaacgagagagggaaaga
gagcgtaggcaaaagggccttcctcagattaaaccagaaactgctagtgtttgtagtact
acactttgggtgggacaactagacaaaagaactactcaacaggatgttgccagtctttta
gaagagtttggcccaattgaatctattaatatgatacctcctagggggtgtgcctatatt
gtaatggtccacagacaggatgcttaccgtgcccttcagaaactgagccgtggcaactac
aaagtcaaccagaaatctataaagattgcctgggccttaaataaaggaataaaaaccgat
tataaacaatattgggatgtagaactaggagttacttatataccgtgggacaaagtcaaa
cctgaagacctggaaagtttttgtgaaggaggaatgctggacagtgaaacactcaatcct
gattggaaaggaatccctaagaaatctgacagtgaagttgctcagaatggaggtgcagag
actacacatactgaaccagtatcaccaatacctaaggctttacctgtccctgttcctccc
attcctgttcctgcaccaataacagtacctcctccacaggtcccaccacatcaaccaggt
cctccagtggttggtgcactccagccacctactttcacaccacctttaggaattccccca
cctggttttggccacggagttcctcctcctccaccaccaccatttttacgcccaggattc
aacccaatgcatttaccaccaggttttcttcctcctggacctccacctcccataacacca
ccagtgtctattcctcctccccacactccaccaataaccatcccaaattctactatcgct
ggtataaatgaagacactacaaaagacttatctattggaaatcccattccaacagtggtt
tctggggctagaggaaatgccgaatctggtgacagtgtgaaaatgtatgggtctgccgtt
ccacctgctgcacctcctgttacccaacctgtttcacttcttgggactcaaggagttgca
cctggtcccgttatcgggttacaagcgccatctactggtcttctgggtgctcggcctggc
ttaatacccctgcagcgcccccctggaatgcctccacctcacttacaacgattccctttg
atgccaccgcgccctatgccacctcacatgatgcacagaggaccccctccaggcccagga
ggcttcggaatgccgccgcctcatggaatgaaaggccctttcccacctcatggccctttt
gttaggccaggtgggatgccaggacttgggggccccggcccaggccccggcggagctgaa
gagcgagacggaaggccacagcaaccaccacagcaaccaccaccacagcaaccctttaga
aatgaaactaggcagcagcagttcaattcaggtagagaccaagaaagatttgggaggagg
tcttttggaaatcgggtagaaaatgatcgggaacgatacggtaaccgtattgatgacaga
gataatagtaatcgtgaaaggagagagtggggaagaagaacccctgaacgagacaggcac
agagacttggaagagaggagacgatccagtggacatcgagacagggattctagagagaga
gattctcgtagagataaggaagagaatcgagggaaggagaaacctgaggtgacagatagg
gcaggtggtgataagaccattgaaccctctagtagtagccaagtgggaaatgcagacact
atttcagaactcgataaaggggagtcaacagctctaaaccctactgaagagttaccgtca
gaggctacttcatctgttgatgaacctgaaaaggattctgcctcgggagtagaggcttcc
cgctag
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integrated database retrieval system
