Monodelphis domestica (gray short-tailed opossum): 100026988
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Entry
100026988 CDS
T01031
Symbol
PAXBP1, GCFC1
Name
(RefSeq) PAX3 and PAX7 binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100026988 (PAXBP1)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100026988 (PAXBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
100026988
NCBI-ProteinID:
XP_007493337
Ensembl:
ENSMODG00000021072
LinkDB
All DBs
Position
4:15265862..15298313
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AA seq
809 aa
AA seq
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MFRKARRVNVRKRNDSEEEEREREEDQEAPPLLPPGGGEESGAGDRAPGGELQSPPLAPG
PPLLSSSSAALLLSPGADAGPGFPASAEQGNGLKPRKRPRENKEAPRASLLSFQDEEEET
EEVFKVKKSSYSKKIVKLLKKEYKEDLEKSKVKTELNSSADAEQPLDKAGQTKDLNLEDG
AIICEHGEEEMEVESEKEEEKPKVGGTFSSALSSLNVLRPGEIPDAAFIHAARKKRQMAR
ELGDFTPHDHEPGKGRLVREDENDASDDDDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSD
DEALVTGEQDEELSRWEQEQIRKGINIPQVQASQPAEVNMYYQNTYQTMPYGSSYGIPYT
YTAYGSSEAKSQKTDNTVPFKTPTNEMTPVTIDLVKKQLKDRLDSMKELHKANRQQHEKH
LQSRADSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAMHQLY
KQRASRLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARR
TRRRQAREQTGKMADHLEGLSSDDEETSTDITNFSLERDRISKESTKIFEDVLESFYSID
CIKSQFEAWRSKYFTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFESMLWFESL
LFYGCEEQEQEKEDVDVALLPTIVEKVILPKLTGIAENTWDPFSTTQTSRMVGITLKLTS
GYPSVVNAENKHFQLYLKALLLRMRRTLDDDVFMPLYPKNILENKNSGPYLFFQRQFWSS
VKVSDLDILEIWNLFTCFGILCYLSKIIK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggcccggcgggtgaacgtgcgcaagcggaacgactcggaggaggaggag
cgggagcgcgaagaggaccaggaggcgccgccgctgctgccgccgggcgggggggaggag
tcgggcgctggggacagggcccccggcggtgagctccagtcgccccccctggcccccggc
ccgccgctcctctcctcctcttctgctgcgctgttactaagccctggggccgatgctggg
cctggcttcccggccagcgccgagcagggcaacggcctgaagccgcgcaagaggccgcgg
gagaacaaagaggcgccccgggccagcctgttgagtttccaggacgaagaagaagaaact
gaagaagttttcaaagtgaagaaatcaagttatagcaaaaaaatagtaaaactacttaag
aaagaatataaagaagatcttgaaaaatcaaaggttaagacagaactcaattcatcagcc
gacgctgaacagcctttggacaaagcaggacagactaaagatctaaatctagaagatgga
gctattatctgtgaacatggagaagaagaaatggaagtggaaagtgagaaggaagaagag
aaaccaaaagttggtggaactttttcaagtgctttgtcgtctttgaatgttttgcgtcca
ggggaaatcccagatgctgcttttatccatgctgctaggaaaaaacgtcaaatggcccgt
gaactcggtgattttacaccacatgatcatgagcctggtaaaggccgccttgttagagaa
gatgaaaatgatgccagtgatgatgatgatgatgatgagaaacgtcgaatagttttctct
gttaaagaaaagtcacagaggcaaaaaattgcagaggaaataggtattgagggaagtgat
gatgaagccttagtaactggggaacaggatgaagaactaagtcgatgggaacaggagcag
ataagaaaaggaattaacatacctcaggttcaagcaagtcagcctgctgaagtgaacatg
tactaccagaatacttaccagacaatgccttatggttcatcgtatggcattccttacact
tacacagcctatggatcatcagaagccaaatctcaaaaaacagataatacagtccctttc
aaaactcccactaatgagatgactcctgttactattgatttggtaaagaaacagcttaaa
gacaggttagactccatgaaagagttgcacaaagcaaatcgacagcaacatgagaaacat
ctgcaaagccgagcggattctaccagggctattgaaagattggaagggtcttctgggggt
attggtgaacggtataaatttttgcaagaaatgcgagggtatgtccaagacttgcttgag
tgtttcagtgaaaaggtgccactgattaacgaacttgaatcagcaatgcatcagctgtac
aaacagcgagcttcccgccttgtccaaagacgacaagatgatattaaagatgaatcttcg
gagttttcaagccattcaaataaagctctgatggcaccaaatcttgattcttttggacga
gaccgagccttgtatcaggagcatgcaaagcgtcggattgcagaacgggaggccaggagg
acccgccgcagacaagccagggagcaaaccggcaaaatggcagatcacctcgaaggtctt
tccagtgatgatgaagaaacatcaacagatattactaatttcagtctggaaagagatcgt
atctcaaaagaatccactaagatttttgaagatgtccttgagagcttctattcaattgat
tgtattaaatcacagtttgaagcatggcgttctaaatatttcacttcttataaggatgct
tatattggtctttgtttgccaaagttattcaatcctcttataaggttgcagcttctcact
tggactccgctagaggcaaaatgtcgtgactttgaaagtatgctgtggtttgaatcattg
ctattttatggctgtgaagagcaagaacaagaaaaggaagatgtagatgttgcattacta
cctaccattgtggaaaaagtaattctccctaaactaacaggaatagctgaaaatacatgg
gaccctttctctacaacacagacatctagaatggttgggattacattgaaactgacaagt
ggatatccttcagtggtaaatgcagaaaataaacatttccagctatacttaaaggcactc
ttactaagaatgagaagaactttagatgatgatgtattcatgcccttatatcccaagaat
atcttggaaaataaaaactctggcccttatttgtttttccagcgacagttctggtcttca
gttaaggtaagtgatcttgacattctagagatttggaatttatttacttgttttggaatt
ttatgctacctctctaaaataataaaatga
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