Monodelphis domestica (gray short-tailed opossum): 100027119
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Entry
100027119 CDS
T01031
Symbol
PODNL1
Name
(RefSeq) podocan like 1
KO
K25038
podocan-like protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mdo00535
]
100027119 (PODNL1)
Proteoglycans [BR:
mdo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
100027119 (PODNL1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
100027119
NCBI-ProteinID:
XP_001377508
Ensembl:
ENSMODG00000011977
LinkDB
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Position
3:446364239..446372049
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AA seq
630 aa
AA seq
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MGCPQVLSSARYKALGCYCPHDDGPFPKPGSMGPSPPGLEILSQLHVPCQSMSLLLLLLL
GNLPSQDAATAIPIMTEDQNFPHLGESLQPPPRACPPRCSCPRDDTVSCDGLDLGLFPSN
ITKSAQHLSLQNNQLVEIPYNELSRLRYLRTLNLHNNQLSSEGLPDEAFESLPDLQYIYL
ANNQLTVAPQFLPRSLRIADLAANQLVEIYPLTFGEKPELRSVYLHDNQLTNTGLPFDAF
RGSEAITTLILSSNQLSYLPPSLPSSLIRLHLQNNRIAKVPRGALGRHVQLRELYLQHNR
LSDAGLDATTFSKLKSLEYLDLSNNRLGEVPEGLPPSLVILHLGRNQICHVPAGRLSGAR
GLQYLLLQHNPLGPGGLDLAAFQGLRGLHTLHLYASGLEQVPAGLPRRLHALMLPHNRIS
ELGPRAFVATPSLVDLNLAHNQLTSAHLHHLAFCRLGHLQTLDLAGNRLTLLPQGLPGSL
QVLRLPRNQLNTLDPEPMTNLSMLQELHLGHNRLRVGSIMPGTWQEVPSLKLLDLSHNEL
SFVPPDLPEALEFLYLQGNRISSVGAQAFLTTPRLRALVLRSNQLMMTSISPEAFLDLLH
LEVVDTTGNPEPIIVRMPKRPKRPQRPQAH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtccccaggtgctgagctcagccaggtataaggcgctgggatgctactgtccc
catgatgatggtccttttcctaagccaggtagcatgggcccctctccaccaggcttagag
atcctctcccagctccatgttccctgccagtcaatgagcctactgctgctcttgctgctg
ggaaacctgcccagccaagatgctgctaccgccatccccatcatgacggaggaccagaat
ttcccccacctgggggagagcttgcaaccaccaccccgagcctgcccccctcgatgctcc
tgccctcgggatgacaccgtgtcttgtgatggccttgaccttgggctcttccccagtaac
atcaccaaaagtgcccagcatctctccctacagaataaccaactcgtggagattccctac
aacgagctctcccgcctccgctacctccggactctcaaccttcacaacaaccagttgtcc
tcggagggtctccctgatgaagccttcgagtcactgcctgatcttcaatacatttatctg
gccaacaaccagcttactgtggcaccccagtttctgccgcgctccctacgcatcgctgac
cttgctgccaaccagctagtggagatctacccacttacatttggggagaagcctgagctc
agatctgtgtatctccatgacaaccagctgaccaacacgggcctcccctttgatgccttc
cgaggttctgaggccatcaccaccctgatcctctccagcaaccagcttagctacctccca
cccagcttaccctcttcgctgattcgcctccacctgcagaacaaccgaattgccaaggtt
ccccgaggggccctgggccgacacgtccagctgcgcgagctctacctgcagcacaaccgg
ctctctgatgctggccttgatgctaccaccttcagcaaactcaagagcctggagtactta
gacctgtccaacaacaggttgggtgaggtgccggaggggttaccaccaagcctggtcatt
ctgcacttgggcaggaaccagatttgccatgtgccggcaggaaggcttagtggggcccgg
ggtctgcagtatttgttactacagcacaacccgctggggcctggaggactggacctggct
gccttccagggtcttcggggcctgcatacgttgcacctttacgccagtgggttggaacag
gtgccagcaggcctgccccgccgcctccatgccctcatgctgccccacaaccgcatcagt
gagctggggcctcgtgcctttgtggccacaccctctctggttgacctcaatctggcccac
aaccaactcactagcgcacacctccaccacctggcattctgccgcctggggcatctgcag
acccttgacctagcaggaaaccgccttaccctgctgccgcagggcctgcctggcagcctg
caggtgctcaggctgcccaggaatcagctcaacaccctggaccccgagcccatgaccaac
ttgagcatgcttcaggagttacacctgggacacaacaggctccgtgtgggttctatcatg
cctgggacctggcaggaggtccccagcctcaagctcctggatctcagccacaatgagctg
tcttttgtgcccccggatcttcccgaagccctggaattcctgtaccttcaggggaaccgc
atcagcagcgtgggtgcccaagccttcctcacaacaccccgcctccgagccctggtcctc
agatccaaccagctgatgatgaccagtatctccccggaggcctttctggatctgctgcat
ttagaggtggttgatacaacaggaaaccctgagccaatcatcgtcaggatgcccaaacgg
cctaaaaggccccaaaggccccaggcccactga
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