Monodelphis domestica (gray short-tailed opossum): 100027234
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Entry
100027234 CDS
T01031
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specific factor 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03015
mRNA surveillance pathway
mdo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100027234 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100027234 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100027234 (CPSF7)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100027234 (CPSF7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100027234
NCBI-ProteinID:
XP_007497687
Ensembl:
ENSMODG00000020364
UniProt:
A0A5F8GG91
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Position
5:complement(299451095..299478184)
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AA seq
486 aa
AA seq
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MSEGVDLIDIYADEEFNQDPEFSNADQIDLYDDVLAASSQPSDDRSSSAEPPPPIRQEQS
PKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQIIRSVGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKILNGEKVDVRLATRQNLSQFEAQARKRECVRV
PRGGVPPRAHSRDSSDSADGRATPTENLVPPPPRVDKPPSVLPYFSRPPSALPLMGLPPP
PIPPPPPLSSGFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
AAVGPPPDAYIKASAPYNHHGRSKCHGRSGMVLSPCSRELGPPPPTVCEAEFEEIMNRNR
AISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEA
KSYSVGAGGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHEDYFQERNREHERHRDR
ERDRHH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggagtggacctgattgatatctacgcagacgaggaattcaaccaggaccca
gagttcagtaatgctgatcagattgacctgtatgatgacgtgctggctgctagctcgcag
ccctctgatgaccgaagtagcagtgccgagccaccgcctcctatccgacaggagcagtct
cccaagcccaacagcaagtcgccagcgatcctgtacacctacagtgggctgcggaataag
cgggctgcagtctacgtgggcagcttctcctggtggacaacagaccaacagctgatccaa
atcatccgttctgtgggggtctatgatgttgtggagctaaaatttgcagagaatcgagct
aatggccagtctaaagggtatgctgaggtggtggtagcctctgagaattctgtccacaaa
ctgttggagcttctgccaggcaagattctcaatggggagaaggtggatgtgaggctggcc
accaggcagaatttgtcacagtttgaggcgcaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggagtaccaccacgtgcccactcccgagattctagtgattctgctgatgga
cgggccactcccactgagaaccttgtgcccccgcccccccgtgtggacaagccccccagt
gtgctgccctacttcagccgccctccctcagctcttcccctgatgggtctgcccccaccc
cccatcccacctccacctcctctctcctcgggctttggggtccctcctccgcctcctggt
atccattaccagcatctcatgcccccccctccccgactgcctccccacctggctgtgcct
cctcctggggccattccacctgccctgcacctcaaccccgccttcttccccccaccaaat
gctgcagtggggcctccgccagatgcttacatcaaggcctctgcaccctataaccaccat
ggcagatctaagtgccacgggcggtcagggatggtgttgtctccgtgcagccgagagctg
ggccccccgcccccgacggtgtgtgaagccgagttcgaggagatcatgaataggaacaga
gcgatctccagcagtgccatttccaaagctgtctctggggccagtgcaggggattatagt
gacgctattgagacgctcctcacagccattgctgtcatcaaacaatcccgggtcgccaac
gacgaacgttgccgtgtgctcatctcctcccttaaggactgtcttcatggcatcgaagcc
aagtcctacagcgtgggtgccggcgggagctcttccaggaaaagacaccggtcccgtgag
cgatcacctagccggtcccgtgagagcagccggaggcaccgggacctgctccataatgag
gataggcacgaggattattttcaagaaaggaatcgggagcatgagagacaccgggacaga
gaacgggaccggcaccactga
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