Monodelphis domestica (gray short-tailed opossum): 100028665
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Entry
100028665 CDS
T01031
Symbol
PMS1
Name
(RefSeq) PMS1 homolog 1, mismatch repair system component
KO
K10864
DNA mismatch repair protein PMS1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100028665 (PMS1)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100028665 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HK_sensor
Motif
Other DBs
NCBI-GeneID:
100028665
NCBI-ProteinID:
XP_001378642
Ensembl:
ENSMODG00000011535
UniProt:
F6QXE7
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All DBs
Position
4:206637906..206755858
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AA seq
936 aa
AA seq
DB search
MKQLPAATVRLLSSSQVITSVISVIKELIENSLDAGATNIDVKLENYGFDKIEVRDNGDG
IKAIDAPVMAIKHYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTKTAADNFSTQ
YVLDSSGHIVSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTARRCKDELKKIQDLLIAYG
ILKPELRIIFTHNKVIIWQKSRVSDHKTALMAVLGTSIMSNMAAFEHHYEESQIYLSGFL
PKLDSDHSLTNLSTPERSFIFINNRPVHQKDILKLIRHYYTEKCLKESTRSYPVFFMKIV
VPAADVDVNLTPDKSQVLLQNKESLLIAVENVLTSWYGPLISTDSHENNKADVSSVDMTV
NRTVQTDVDVNEMESSGNSYSDVDISTFSFQHDMQNCESGNNTEVCLKKQIICHDNPHGF
DGDISNTDKIKQNTFQDIFINNFSSCKNDASQHNETFNLNALKHVQSINGNGDGPINEVE
KNVAATLSEISSEICADDWSKGNALKNSVGKNIEPVEIFVPQAKSLTSDLNINCNQQNPE
QKSPSKSPSKKKSNVIDDKCGQLTAYDLISSRVIKKPISARDLFIQDQRSKFLSENSKTH
LEDMTVQAEELWKTLNEEERMKYEDKAAKDLERYNKQIKKATEQGLQRTTKENEKRSKLT
TMQNLAQKHKLKTSFSNQPKLDELFSQSEKRKSKSQNIKILQIPFSMKTLKLKYRKHMKS
DLLYKEELCLIHHLSFPDAWIIASQKEIMLLNPYRVEEALLFKRLLENHKLPAEPLEKPM
ILTESLFNGSIYLEVLSKMTMDDQDFSGSTYLSDPRLTANGFRIKMIPGTSVTENHLEIE
GMANCLPFYGILDLKEILNAVLNKNAKEVYECRPRKVVSYLEGEAVRLSRQLPLYLSKED
VQDTIYRMKLQLGDDIKGCVHGRPFFHHLTYLPKTI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgcctgcagcaactgttcgtctcctttcaagttctcaagtgatcacttct
gtgatcagtgtcataaaagagctaatagaaaattcattggatgctggtgccacaaatata
gatgttaaactggaaaattatggatttgataagatagaagttcgagacaatggtgatgga
atcaaagctattgatgcacctgtgatggcaataaagcattatacctcaaaaataaacagt
catgaagaccttgaaaatttgacgacttatggttttcgtggggaagctttggggtcaatt
tgttgtatagctgaggttttaattacaacaaagacagctgctgataactttagcacccag
tatgttttagatagcagtggtcatatagtttctcaaaagccttcacatcttggacaaggt
acaacagtaactgcactgaaattatttaagaatcttcctgtaagaaaacaattttattca
acagctagacgatgtaaggatgagttaaaaaaaatccaagaccttcttatagcctatggc
attctcaaacctgaattaaggattatttttacacataacaaggtaattatttggcagaaa
agcagggtttcagatcataaaacagctttgatggcagttctgggaacttccattatgagc
aatatggcagcctttgagcatcactatgaagaatctcagatttatttaagtggatttctt
ccaaagcttgactctgatcactctttgacaaatctttcaaccccagaaaggagttttatt
ttcataaataatcgaccagtacatcagaaagacatcctaaagttaattcgtcattactac
actgagaaatgcctaaaagagtcaactcgttcttatccagttttcttcatgaaaattgtt
gtgcctgcagctgatgtagatgtaaatttaacacctgataaaagccaagtattattacaa
aataaggaatcacttttaattgctgttgaaaatgtgttgacatcatggtatggaccacta
attagtacagattctcatgaaaataataaagcagatgtttcctcagttgacatgactgtt
aacagaacagtacaaacagatgtggatgttaatgaaatggaatcatctggaaatagttat
tcagatgtggatatttcaaccttttcattccaacatgacatgcagaattgtgaatcagga
aataacactgaggtctgcttaaaaaaacagataatttgtcatgataatcctcatggtttt
gatggtgacatttctaatactgataagataaagcaaaatacatttcaagacatcttcata
aataatttttcatcatgtaagaatgacgcaagccaacataatgaaacttttaatctaaat
gctctaaagcatgttcagtctataaatggcaatggagatggtcctattaatgaggtggaa
aaaaatgtggcagcaacactatctgaaatatcttctgaaatctgtgcagatgactggagt
aagggaaatgcacttaaaaattcagtaggaaagaacattgaacctgtggaaatttttgtg
ccacaagcaaaaagtttaacatctgacctaaatataaactgtaatcaacaaaatcctgaa
cagaagagtcccagtaaaagccccagtaaaaagaaatcaaatgtgatagatgacaaatgt
gggcaacttacagcctatgatttaattagcagtcgagtaattaagaagcccatttcagca
agagacctttttattcaagatcagcgttcaaaatttctcagtgaaaattcaaagacccat
ctagaggatatgacagtacaagctgaagaactgtggaagacattgaatgaagaggaaagg
atgaaatatgaagataaagctgctaaagatctagagcgatacaataagcaaatcaagaag
gctactgaacaagggttacaaagaacaacaaaagaaaatgaaaaaagatcaaaattaaca
acaatgcagaatctggcacaaaaacacaagctaaaaacttcattttctaatcagccaaaa
cttgatgagcttttttctcaaagtgagaaaaggaaaagcaagtcacaaaatataaaaatt
ttacagattcctttctctatgaaaaccttaaaacttaagtataggaagcatatgaaaagt
gatttactatataaagaagaactttgcctgatccatcatttaagttttcctgatgcatgg
ataattgcttcccaaaaagagatcatgttattaaacccatacagagtggaagaagcttta
ctatttaaaagacttcttgaaaatcataaacttcctgcagagccattggagaagccaatg
atattaacagagagtctttttaatgggtccatttatttagaggtcttaagtaaaatgaca
atggatgatcaagatttcagtggctcaacctacttgtctgatccacgccttacagcaaat
ggatttaggataaaaatgataccaggaacttcagtcactgaaaaccatctggaaatagaa
ggaatggctaattgtctcccattctatggaatattggatttaaaggaaattcttaatgcg
gtgctaaataaaaatgcgaaggaagtttatgaatgtagacctcgtaaagtagttagttat
ttagagggagaagcagtacgtctttctcgacagctacctttgtatttatcaaaagaggat
gtgcaagatactatatataggatgaagctacaactgggagatgacattaagggatgtgtt
catggtcgcccattttttcatcacttaacataccttccaaaaactatataa
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