Monodelphis domestica (gray short-tailed opossum): 100028863
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Entry
100028863 CDS
T01031
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross complementing 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100028863 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdo03041
]
100028863 (XRCC6)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100028863 (XRCC6)
Spliceosome [BR:
mdo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100028863 (XRCC6)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
100028863 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
VWA
Motif
Other DBs
NCBI-GeneID:
100028863
NCBI-ProteinID:
XP_001378778
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Position
Un
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AA seq
613 aa
AA seq
DB search
MSAWESYYRHEGAEDEEEEQEEGAETEGQYKYSGRDSLIFLVDASKAMFEPQDEGPRTSF
ELTIQCIQSVYSSKIISSDRDLLAVVFYGTDKAKNSVNFRSVYVLHELDPPGAKRILELD
RFKGEQGERNFRELIGHGPDYSLSEALWVCANLFSGVRLKMSHKRIMLFTNEDHPHANDG
AKASRARTKASDLRDTGIFLDLMNLKKPGGFDVALFYRDLITPAEGEEVGVHFEESGRLE
DLLRKVRAKETRKRALARLKLRLGKDVALMVSIFNLVQKACKPLPIRLYRETNEQVKTKT
RTFSVQTGGLLLPSDTKRSQVYGGRPIVMEKAETEELKRFDEPGLVLIGFKPLFLLKQHH
FLRPSLFVYPEESLVHGSTTLFSALLTKCLEKGVLALCRYTPHQNSPPCFVALVPQEEEL
DAQRVQVTPPGFQLVFLPYADDKRKVPATEKVTANPEQVDKMKAIVQRLRFKYRSDSFEN
PVLQQHFRNLEALALDLTEPEHAPDLTLPKVEAMDLRLGSLVEEFKELVYPPDYDPQRKA
VKRKQGTEGGGPGDKQPRLEVSQEELKAHAEKGTLGKLTVPVLKEACRVCGLKPSSTKKQ
ELLGLLQEHFQKP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtgggagtcgtactaccgacacgaaggagccgaggatgaggaggaggagcag
gaggagggggccgaaacggaaggacagtacaagtactccgggcgggacagtttgattttc
ttagtcgatgcctccaaagccatgttcgagccgcaggatgaaggcccgagaacgtctttt
gagctcaccatccagtgcatccagagcgtgtacagcagcaagatcatcagcagcgaccga
gacctcttggccgtggtcttctacgggacggacaaggccaagaactcggtgaacttccgc
agcgtctacgtcctgcacgagctggacccgccaggtgcgaaaagaatcctggaactcgac
cgctttaagggagagcagggggagaggaatttccgggagctcattggccacggcccggac
tactcgctgagcgaggccctctgggtctgtgccaacctcttcagcggggtccgcctcaag
atgagccacaagcgcatcatgctgttcaccaacgaggaccacccccacgccaacgacggc
gccaaggccagccgggccagaaccaaagccagcgatctccgcgacacgggtatcttcctg
gacctcatgaacctgaagaagcccggggggttcgacgttgccttgttctacagggacctc
atcaccccggctgagggcgaggaggtcggggttcactttgaagagtcaggaaggctggag
gacctcctgcggaaggttcgggccaaggagaccaggaagcgcgctctggccaggctgaag
ctcagactgggcaaggacgtggccctcatggtgagcattttcaacctggtccagaaggcc
tgcaagcccctccccatccggctttaccgggaaacaaacgagcaggtgaagaccaagacg
cggacgttcagcgtccagacgggcggcttgctcctgcccagcgacaccaagaggtctcag
gtgtacggaggccggcccatcgtcatggagaaggccgagacggaggagctgaagcgcttc
gacgagccgggcttggttctgatcggcttcaagcctctcttcctgctcaagcagcaccac
ttcctgaggccttccctgttcgtgtacccggaggagtccctcgtccacggaagcaccacc
ctgttcagtgctttgctcaccaagtgcctggagaagggggtgctggccctgtgcagatac
accccccaccagaacagccccccgtgtttcgtggccctggtgccccaggaggaggagctg
gacgcgcagagggttcaggtgacgcccccaggcttccagctcgtcttcctgccctacgcg
gacgacaagcggaaggtgcccgcgaccgagaaggtgacggccaacccggagcaggtggac
aagatgaaggcgatcgtgcagagactccgcttcaagtaccggagcgacagcttcgagaac
cccgtcctgcagcagcacttccggaacttggaggccctggccctggacctgacggagccc
gagcacgccccggacctgaccttgcccaaagtggaagcgatggatctcaggctgggcagc
ctggtggaggagttcaaggagctggtctacccccctgactatgacccccagaggaaggcc
gtgaagaggaagcaaggtacggaaggaggaggtcctggggacaaacagcccaggctcgag
gtctctcaagaggagctcaaggcccatgcggagaagggcaccctgggcaagctcaccgtg
cccgtcctcaaggaagcctgccgggtgtgcgggctcaagcccagcagcaccaagaagcag
gagctcttgggtctgctccaggagcatttccagaagccctga
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