Monodelphis domestica (gray short-tailed opossum): 100030134
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Entry
100030134 CDS
T01031
Symbol
SOX30
Name
(RefSeq) SRY-box 30
KO
K09271
transcription factor SOX15/30
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100030134 (SOX30)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100030134 (SOX30)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100030134
NCBI-ProteinID:
XP_001379720
Ensembl:
ENSMODG00000008341
UniProt:
F7EKS5
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All DBs
Position
1:complement(352639031..352665158)
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AA seq
844 aa
AA seq
DB search
MERARPEPPPPQPPPPPPPRQLPRGSLPRPLRPALPSLLSQPLAEGAPYRQPSEPSQSPP
APRLGPGPRSPSPCQAPGEQPSPLLPHSGAGGPPPRGPACAAPRLLLQVKAEQPPPPPPP
PLPPPPPPPLPPPPPLLFLHPTPHPAAEEAATPPLLPSHPSAATVASGSSRLLQVKSEQV
LLLPPALVPGEGALCRGEQLPPPPQHIPASRVLQVKAEKPELSAREGAGQELLGRRGAEG
GHRAARGGKGEGPGSATDSRRLEEKKGSKAEAEESRREMAKNNGESKSLGSVREGVIKTE
EPERMHEDCRHGKDAAQVKPPASNGLVHSNKDVILTQPPSGFGPHSQDLRIPLTLHTVPP
GARIQFQGPPPSELIRLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPF
SKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDE
AQKIKEKHREEFPGWVYQPRPGKRKRFPLSVSTVFSGTTQNIISTNPTTIYPYRSPTYSV
VIPSLQNTISHPVGEAPPTIQLPTPPVQRPSPITLFQPSVASTAQVAVPAPSLPLRPALP
PQRFTGPTQTDTHRLHSGANRSVKRPTPVSLESTSRNPTSASTAHARFAPSTIQPPKEYP
SVSTCPRSAPLPQAPPIPHPHVYQPPPIGHPATLFGAPPRFSFHHPYFLPGPHYFPSSTC
PYSRPPFGYGNFPSSMPECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCE
SLDGASYYNSHSHSGEEYLNPMPQLDIGALENVFTAPASTPSSIQQVNVTDSDEEEEEKV
LRDL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggccggagccgccgccgccgcagccaccgccaccgccgccgccccgc
caactgccgcgggggtctctgccgcgcccgctccgtcctgccctgccgtcgctgctttcg
cagcctctggccgagggcgccccctaccggcagccctccgagccctctcagtcccccccg
gctccccgtctggggcccgggccccgaagtccctccccgtgccaggcccccggggagcag
ccctcgccgctgctgccccactccggagcgggcgggccccctcctcgaggcccggcctgt
gccgccccccggctgctcctgcaggtgaaggcggagcagcccccgccgccgccgccccct
ccactgccgcctcctcctccccctcctcttcctcctcctcctccccttctgttcttgcat
cctaccccgcatcccgcagcagaggaggctgcgacgcccccgctcctgccttcccatcct
tccgctgccactgtggcgtctggctcgtccaggttgttgcaagtgaagtctgagcaagtc
ttgctcttgccacctgccctggtgcccggggagggtgccctttgtagaggggagcagctg
ccgccgccgccccagcacatccctgcgagcagggtgctgcaggtgaaggctgagaaaccg
gagttgtcagccagggaaggagcagggcaggagctcttgggaagaaggggagctgagggt
ggccatagggctgccagagggggcaagggtgaagggccgggctcagccactgatagccgc
agactggaggagaagaagggcagcaaggcagaggcagaggagagcaggcgggaaatggcc
aaaaacaatggggagagcaaaagccttgggtccgtgagagaaggagtcataaaaactgag
gaacctgaaaggatgcatgaggactgcaggcatggcaaggatgctgcacaagtcaaacca
cctgcatccaatggcctggtccattctaacaaggatgtcattttgactcagcctcccagt
ggatttggcccacattcacaagatctgaggatccctttgactcttcatactgtaccccct
ggggccagaatccaatttcagggacctccgccttcagagctgatacgattgactaaggtg
cctctgacaccagtgcctataaaaatgcaatccttactggagccttcagtaaaaattgaa
accaaagatgtcccactcaccgtgcttccctcagatgcaggaattcctgatactcctttc
agtaaggacagaaatggccatgtgaagcgacccatgaatgcatttatggtctgggcaaga
atccatcgaccagcactagccaaagctaatccagcagccaacaatgcagaaatcagtgtc
caactcgggttagagtggaacaaacttagtgaagaacaaaagaaaccttattatgatgaa
gcacaaaaaattaaagaaaagcaccgagaagaatttcctggttgggtttatcaaccacgt
ccaggcaaacgaaaacgcttccccctaagtgtgtctactgtgttttctggtactacgcag
aatatcatctctacaaatccaacaacaatttatccttatcgctcacctacatactctgtg
gttatccccagcctacagaacactatctctcatccagttggtgaagccccacctactatc
cagctacccacgcctccagtccagcgtccaagccctattacactcttccaaccaagcgtt
gccagcactgctcaggtggccgtcccggctccaagcttgcctcttcgtccagcacttcca
ccacagcgctttactggacctacccaaacggacactcatcgtctgcattcaggagccaat
cgctctgtaaagagacccaccccagtctctttggagagtaccagtagaaatccaactagt
gcaagtactgctcatgccagatttgccccctccaccattcagccccccaaggagtacccc
agcgtttctacttgtccccgaagtgcaccactccctcaggctccacccattccacaccct
catgtctatcaaccccctcccattggccacccagccacattatttggtgcaccgcctcga
ttctcctttcatcacccttacttcttacctggacctcactatttcccatcaagcacgtgt
ccttatagtcgtcctccctttggctatggaaatttcccaagttcaatgccagaatgcctt
gggtattatgaagataggtatcaaaagcatgaggccatgttttctgccttaaatagagac
tatcccttcagagactacccagatgaacggacacacagtgaagattctcgaagctgtgag
agcctggacggagcctcttactataacagccatagccatagtggggaagaatatttaaac
cccatgcctcaactggacattggagccttagagaatgtattcacagctcctgcatctact
ccctctagcatccagcaggttaatgtaactgacagtgatgaggaggaagaagagaaagtg
ctcagggatttataa
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