Monodelphis domestica (gray short-tailed opossum): 100030314
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Entry
100030314 CDS
T01031
Symbol
TFEB
Name
(RefSeq) transcription factor EB
KO
K15590
transcription factor EB
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04020
Calcium signaling pathway
mdo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100030314 (TFEB)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100030314 (TFEB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100030314 (TFEB)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
100030314 (TFEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
100030314
NCBI-ProteinID:
XP_016285092
Ensembl:
ENSMODG00000012916
LinkDB
All DBs
Position
2:complement(284584725..284602112)
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AA seq
484 aa
AA seq
DB search
MVYLPRARVIQLAFRLLQPATMASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQ
QQQQQLPGPPTPAINTPVHFQPPPPVPGEILKVQSYLENPTSYHLQQSRDQKVREYLSET
YGNKFAAHISPAQSSPKPPPAASPGVRASHVLSSSAGNSAPNSPMAMLNIGSNPERELDD
VIDNIMRLDDVLGYINPEIQMPNTLPLSSSHLTVYSGDPQVTASLIGVTSSSCPADLAQK
RELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILK
ASXDYIRRMQKDMTNKQLWLRIQELEMQARVHGLPTASPSGVNMAELAQQVVKQELPSEE
GLGEPLLPTAELPDQEPSLTLPPQPPPPPPPPPLPPPQSPYQLDFSHNMSFGGGEGPQGF
PDSLGPEHGSLFPSLSKKELDHLMLLDDTMLPLASDPLFSTMSPEASKASSRRSSFSMEE
GDML
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtctaccttccccgcgccagagtgatccagcttgccttcaggctcctccagccagcc
accatggcatcccgcatcggccttcggatgcagctcatgagggagcaggcccaacaggag
gaacagcgggagcggatgcagcagcaggctgtgatgcactacatgcagcagcagcagcag
caacaacagcagcagctaccagggcctcccaccccggccatcaatacaccagttcacttc
cagcccccacctcctgtgccaggagaaatcctgaaggtgcagtcgtacctggagaatccc
acctcctaccatctgcagcagtcccgagaccagaaggtgcgggagtatttgtcggagacc
tatgggaacaagtttgctgctcacatcagccctgcccagagctccccaaagccaccccca
gctgcttctcccggggtccgggccagccatgtgctctcttcctctgcaggcaacagtgcc
cccaacagccctatggccatgcttaatattggctcgaatccagagcgggagctcgatgac
gttattgacaacatcatgcgcctggatgacgtcctgggatacatcaatccagagattcag
atgcccaatacgctgcctttgtccagcagccacctgacagtatacagtggagacccccag
gtcacagcctccctcataggtgtcactagcagctcctgcccagctgacttggcccagaag
agagagctcacagatgctgagagcagggccttggccaaggaacgtcagaagaaagacaat
cacaaccttatcgaaagaagacgaagattcaacatcaacgaccgaatcaaagagctgggc
atgctgattcccaaggccaatgaccttgatgtgcgctggaacaagggaaccatcctgaag
gcctcantggattatattcgtcggatgcagaaggatatgacaaacaagcagttgtggctt
cgcatccaggagctagagatgcaggccagagtccacggcttacccacagcttctccctct
ggagttaacatggccgaattggcccagcaggtggtgaaacaagagctccccagtgaggag
ggtttgggggagcccttgctccccacagctgagctccccgaccaagagccctccctgacc
ctgcctcctcagccgccacccccaccgccacccccacccctgccaccgccgcagtctccg
taccaactggacttcagccacaacatgagttttggtgggggcgaggggccccagggtttc
cctgactccctggggcccgagcatggctccctcttcccctccttgtccaagaaggagctg
gaccatctgatgcttctggacgacaccatgttgcccctggcctctgatcccctcttctct
accatgtcacccgaggcctccaaggccagcagccggcgaagcagtttcagcatggaggaa
ggggacatgctgtga
DBGET
integrated database retrieval system
