Monodelphis domestica (gray short-tailed opossum): 100032323
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Entry
100032323 CDS
T01031
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082
ATP-dependent chromatin remodeling
mdo04714
Thermogenesis
mdo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100032323 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100032323 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100032323 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100032323 (ARID1B)
03021 Transcription machinery [BR:
mdo03021
]
100032323 (ARID1B)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100032323 (ARID1B)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
Helix-turn-helix
ARID
100032323 (ARID1B)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100032323 (ARID1B)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100032323 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
TFIIA
Motif
Other DBs
NCBI-GeneID:
100032323
NCBI-ProteinID:
XP_007484865
Ensembl:
ENSMODG00000008068
LinkDB
All DBs
Position
2:438366634..438922069
Genome browser
AA seq
2273 aa
AA seq
DB search
MKTGLLPNHKLKNVGDSPAAPPHHQQHHHHAHHHHHHHHPHHLLHHHHALQQQLNQFQQQ
QQQHPISNNNNSLVVVGSGGSNNGAGGSGAAAGAAAAAAAGASAQPSPDMEPQQHGGGKD
GVLGNQAETQAQQLLSKSGEEEELPNKMGEQMGGRYEHPSLGALGAQQQQQQQQQQQQQQ
QQQQQQQQQQQQQPPQSTGNGGSSGGGGGGGGGGNGSLGSGGSSGGGPSAAVGVSEFNNY
YGSAPPASGGTGSRAGPCFDQHGGQQSPGMGMMHPAAAATGXPNSMDPLQNSHEGYPNSQ
YNHYAGYGRAGAGGGGGGGGSGGGGAGGGGGGGGGGGSGVGGGGGGAGAGAGAVAAAAAA
AAAAAAAAGGGGGGGGYGGSSSGYGVLSSPRQQGSNMMMGPGGGGGGGGGGGGGGGGGGG
GGATSLGKAAAAASSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGSSYPDYSG
NPNAPGQQQSQAPGAAGAAPGSQQAAAGMGMGKDLGSQYGTANPGWAAAQQRNHPAMSPG
NTGQTINRSQGSPMDPMVMKRPQLYGMGNNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQG
RTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQHLPPQAQYLSTQSQQRYQ
TQQDMSQEGYGTRSQPPMAPGKPNHEDLSLIQQERPSSLPDLSGSIDDLPTGTEATLSSA
VSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASI
PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMTGTQRNPQMSQYGPQQTGPSMSPHPS
PGGQIHPGISSFQQSNSSGAYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINAN
NQMHGQGPSQPCGTMPLGRMPSTGMQSRPFPGNMSSMTPNSPGMAQQGGPGMGPPMPTVN
RKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMGSSSPYSQPMNNSSSLMNPQAPQYSM
TPNMVNSSTASMGLADMMSPGESKLPVPLKADSKEEGAPQPESKSKKSSSSTTTGEKITR
VYELGNEPERKLWVDRYLTFMEERGSPVTSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKN
KKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQAKIQ
PPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMPGGRNSAVSVHDP
FSDVSDSSFTKRNSMTPNAPYQQGMNIPDMMGRMPYEPNKDPFGGMRKVSGSNEPFMTPG
QIPNSGMQDMYNQAPTGAMSNMGMSQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG
GHQPGIYPQQPNYKRHMDGMYGPPAKRHEGDMYNVQYGSQQQEMYNQYGTTYSGPDRRPI
QGQYPYPYNRERMQGPGQMQQHGLPPQMIGGPMPSSSSEGPQQNMWPTRNDMPYPYQNRQ
GPGGPGQAPPYPGMNRSDEMMVPDQRINHESQWPSHVNQRQPYMSSSASMQPITRPPQSS
YQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPSVPASQVTGPPPQP
PPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTIN
ILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNTNKKE
DSQSLADDSGKEEEDEAECIDYYDEEDEEEEEEEEEEKTGGAEDKSTAFASPDASVDPKE
RPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFES
KMEIPPRRRAPPALSSLGKKKDSEGRSDFEEPPEKSIIATIDDVLSAWPGALPEDANPST
QPESSKFPFGIHEAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLS
FVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEDEEDKGVTCSKDEWWWDC
LEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVL
SPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLS
NLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMC
RAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgggcctgctccccaaccacaaactgaaaaacgttggcgattcccccgctgca
cctccccaccaccagcagcaccaccatcatgcccaccaccaccaccaccaccaccatcct
caccatctcctccaccaccatcatgcactacagcaacagctaaatcaattccagcagcag
cagcaacaacatccaatttctaacaacaacaacagcctcgtcgtcgtcggcagcggcggc
agcaacaacggagcggggggcagcggcgctgctgctggtgctgctgctgctgctgctgct
ggtgcttctgctcagcccagtcctgacatggagccccagcaacatggaggaggcaaagac
ggtgttttgggaaatcaggccgagacccaagcgcagcagttgctgagcaagtcaggcgag
gaagaagagctcccgaataaaatgggggagcagatgggcggccggtacgagcaccccagc
ctgggagctttgggcgcgcagcagcagcagcagcaacagcagcagcagcagcaacagcaa
cagcagcagcagcagcaacagcaacagcagcagcagcagccgccccaaagcaccgggaac
ggcggcagcagcggcggcggcggcggcggcggcggcggcggcaatggtagcctcggcagc
ggtggcagcagcggtggcggcccctccgcggcggtgggggtctcggagtttaataattac
tatggcagcgctccccctgcgagcggcggcacaggcagccgagccgggccttgctttgat
caacatggcggacaacaaagccccgggatggggatgatgcacccggccgccgccgccaca
gggncccccaacagcatggaccccttgcaaaactcccacgaaggctaccccaacagccag
tacaaccattatgccggttacggccgggccggcgcgggaggcggaggaggaggcggtggc
agtggcggcggcggtgctggaggaggaggaggtggaggaggaggaggaggtagtggagta
ggaggaggaggaggaggagcaggagcgggagcaggagcagtggcggcggcggcggccgca
gcggcggcagcagcagcagcagcgggaggcggcggcggcggcggcggctatgggggctcg
tcctcgggctacggggtgctgagctccccccggcagcagggcagcaacatgatgatgggc
cctggaggaggcggcggcggcggaggaggcggcggcggcggcggcggaggaggaggcggc
ggcggagctactagcctgggcaaggctgccgctgctgccagctctgccgcgggaggtttt
cagcgctttgccgggcagaaccagcacccttcgggggccacgccgaccctcaatcagctg
ctgacttccccaagccctatgatgaggagctacggcagcagttaccccgattacagcggc
aaccctaatgccccaggccagcagcagtcccaggcgccgggagcggcgggggcagctcca
ggaagccagcaggcagcagcgggcatgggcatgggcaaagatctgggctcccagtatgga
actgcaaaccccggctgggcagcggcacaacaaagaaatcatccagctatgagccctgga
aacactggacagaccattaacagatcccagggcagtccaatggatccaatggtaatgaag
agacctcagttgtatggaatgggcaataaccctcattcccagcctcagcaaagcagtcca
tacccaggggggtcatatggtccccctgggccacagcgttatccaattggaatccaggga
cggaccccaggtgccatgggaggaatgcaatatccacaacaacagatgccgcctcagtat
ggtcagcaaggtgtgagtggttactgccaacagggccaacaaccatattacaaccagcaa
cctcagcacctcccaccccaggcacaatatctgtcaacacagtcccagcagaggtaccaa
acacagcaggacatgtctcaggaaggctatggaactagatctcaacctcctatggcacca
ggaaagcctaaccatgaagacctgagcctaatacagcaagaaagaccatcaagtttacca
gacttatctggctcaattgatgacctgcccacaggaacagaagcaacattgagttcagca
gtgagtgcatcaggctctactagcagccaaggggatcagagcaaccctgcacagtcaccc
ttctctcctcatgcttccccccatctttccagtataccagggggcccatcaccctcccct
gtgggctctcctgtcgggagcaaccagtcaagatcgggcccaatttctcctgcgagtatt
ccaggcagtcagatgccacctcagcctcctggtagccaatctgaatccagttcccatcca
gccttgagccagtcaccaatgccacaggaacgaggttttatgacaggcacacaaaggaac
cctcagatgtctcaatatgggcctcaacaaactggaccatccatgtcacctcatccttcc
cctggaggacagatacatcctggaatcagtagctttcaacagagtaactctagtggggct
tatggtcctcagatgagccaatatggaccacaaggtaactactcgagacctccaacatat
agtggagtgcccagtgcaagctacagtggcccagggcctggcatgggcatcaatgccaat
aaccagatgcatggacaagggccaagccagccatgtgggaccatgcccctgggacggatg
ccatcaacggggatgcagagcaggccatttcctggaaacatgagcagtatgacacccaat
tctcctggcatggctcagcaaggagggcccggaatgggccccccaatgccaactgtgaat
cgtaaggcacaggaggccgcagctgcagtcatgcaagctgctgcaaactcagctcaaagc
aggcaaggcagttttcctggcatgaatcagagtggactcatgggctccagctctccttac
agccagcccatgaacaacagttccagcctcatgaacccacaagcccctcagtacagcatg
actcccaacatggtgaatagttcaacagcatctatgggtcttgcagatatgatgtcacct
ggtgagtccaaattgcccgtacctctcaaagcagacagtaaagaagaaggcgctcctcag
cccgagagcaagtcaaagaaatcaagttcttctacaaccactggggagaaaatcacaaga
gtctacgagctggggaacgagcccgagcgcaagctgtgggtagacagatacctgaccttc
atggaggagaggggctcgcctgtgaccagtctgccagccgtgggcaaaaagcccctggac
ctgttcaggctctatgtctgcgtcaaagagattggaggcttggcacaggttaataaaaac
aaaaagtggcgcgagctggccaccaacctgaatgtgggtacttctagcagtgcagccagc
tccttgaaaaagcagtatattcagtacctatttgcctttgagtgcaagattgaaagaggg
gaggagccccctccagaagtcttcagcactggagatactaagaaacaagctaagattcag
ccgccatctcctgctaattcaggatccttacaaggtccacagaccccccagtcaactggt
agtaactccatggcagaagttccaggcgatctgaagcctcccacaccagcctctacccct
cacggacagatgacaccaatgccgggcggcaggaacagcgcagtcagcgtgcatgacccc
ttctcggatgtgagtgattcctcattcaccaaacggaactctatgacaccaaatgcacca
taccagcagggcatgaacattccagacatgatgggaaggatgccctatgaacctaacaag
gacccttttggtggaatgagaaaagtgtctggaagcaacgaacccttcatgaccccagga
caaatacctaatagtgggatgcaagatatgtataaccaagccccaactggagcaatgtct
aacatgggcatgagccagcggcaacagtttccctatggagccagttatgacagaaggcat
gagccttatggacagcagtatcctggacaagggcctccctcaggacagccaccctatgga
ggacaccagcctggaatatatccacagcaaccgaactacaaacgtcacatggatggcatg
tacgggcccccagcaaaacgccacgagggagacatgtacaacgttcagtatggcagccag
cagcaagaaatgtataaccagtacggcactacttactccggcccagacaggaggcccatc
cagggacagtatccctacccttacaaccgagagcgcatgcagggcccggggcaaatgcaa
caacacggcctccctccgcaaatgatcggcggccccatgccgtcgtcgtcgagcgagggt
cctcagcagaacatgtggccgacgcgcaacgatatgccttatccgtaccagaacaggcaa
ggtcccggaggccccgggcaggctcccccgtatccaggaatgaaccgctccgacgaaatg
atggtccctgatcagaggataaaccacgagagccagtggccttctcacgtcaaccaacgg
cagccttacatgtcctcttcagcctccatgcagcccatcacgcgccctccccagtcatcc
taccagacgccaccatcgatgccaaaccacatctccagggccccgagcccagcatcgttc
cagcgctccctagagaaccgcatgtctccgagcaaatctcccttcctgccctccatgaag
atgcagaaggtgatccccagcgtcccggcatcccaggtcacggggccgcccccccagcca
ccccccatccgaagagagatcactttcccgccaggctctgtagaagcatcccaacccgtc
ttgaaacaaagacgaaagattacctcaaaagatatcgtaactcctgaggcatggcgtgtg
atgatgtcccttaaatcgggcctcttggctgaaagtacctgggctttggacacgattaat
atcctcctctatgatgacagcactgtggctactttcaatctctctcagttatctggattt
cttgagcttttagtagagtactttagaaaatgcctgattgacatttttggaattctaatg
gaatatgaagtgggggatcccagtcaaaaagcacttgatcacaacacaaataagaaagag
gacagccagtctttggcagatgactctgggaaagaagaagaagacgaagctgaatgtatc
gattattatgacgaggaagatgaggaggaggaagaggaggaagaagaggaaaagacaggt
ggcgcagaagacaagagcacggctttcgcttctcccgatgccagcgtcgatccgaaagag
aggccgaagcaggccagtaaatttgacaaactgccaataaagatagtaaagaagaataat
ctgtttgtggtcgaccgatctgacaaactaggccgtgttcaggaattcaacagcgggctt
ctccactggcagctggggggaggtgacaccacggagcatatccagactcattttgagagc
aagatggaaattcctccccgtcggcgggcacctcctgccctcagctccctgggcaaaaag
aaagactcagaaggaagaagcgacttcgaggagcccccggagaaaagcatcatagcgacc
atcgacgacgtcttgtccgcttggccgggagcgctgcccgaagacgcgaaccctagcacc
cagcccgaaagcagtaagtttccctttggcatccacgaagccaaaagccaccggaatatt
aaactgctggaggacgagccaaggagccgagacgagactccactatgcaccatcgcccac
tggcaggactctttggccaagcgctgcatctgtgtgtcaaatatcgtccgtagcttgtct
tttgtgcctggcaatgacgccgaaatgtccaaacatccaggcctggtgctgatcctgggg
aagctgattcttcttcaccacgaacatcccgagagaaaacgggcccctcagacgtacgag
aaagaagacgaagaggacaagggggtgacctgcagcaaggatgagtggtggtgggactgt
ctcgaggtcttaagggataatacattggtcacattagccaacatttctgggcagctagac
ttgtctgcttacacagaaagcatctgcttgccaattttggatggcttgctacactggatg
gtgtgcccatccgccgaggcgcaggatccctttcccacagtgggacccaactcagtgctg
tcgcctcaaagactcgtcctggagaccctgtgtaagctcagcatccaggacaacaacgtg
gaccttatcttggccacccctccttttagccgtcaggagaaactctacgctactttagtt
aggtacgtgggagaccgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcg
aaccttgcccaaggcgacgcgttagccgccagggcgatagctgtgcagaaaggaagcatc
ggaaacttgataagcttcctagaggatggggtcacgatggcccagtaccagcagagccag
cataaccttatgcacatgcaacctccacctctggaaccacctagcgtagacatgatgtgc
agggcggccaaggccttgctggccatggccagagtagatgagaaccgctcagagttcctt
ttgcacgagggccgtttgctggatatctcaatatcagctgtcctgaactctctggttgcc
tctgtcatctgtgatgtactctttcagattgggcagttatga
DBGET
integrated database retrieval system
