Monodelphis domestica (gray short-tailed opossum): 100032613
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Entry
100032613 CDS
T01031
Symbol
SAMHD1
Name
(RefSeq) SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03250
Viral life cycle - HIV-1
mdo04623
Cytosolic DNA-sensing pathway
mdo05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100032613 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100032613 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100032613 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100032613 (SAMHD1)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100032613 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
100032613
NCBI-ProteinID:
XP_001381585
Ensembl:
ENSMODG00000001280
UniProt:
F7CIF8
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All DBs
Position
1:complement(390351755..390408972)
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AA seq
622 aa
AA seq
DB search
MRELGAPQKRARCGSPDPPPEHAAALAESAGAEFQDDGDPQSWGPEQLCAFLNHQGFSDP
ALLSRFRENKIRGSQLLHLDESLLENLGVRSSEDRQKLLDCVYKLNQSHEDTMKVFNDPI
HGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYVFPGASHNRFEHSLGVGYLAGYLVRTL
QEKQPELQITNRDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPELNWRHETASVKMFE
HLVNANGIEAVMRNYGLVPEEDICFIKEQIEGSLDSTEEQSAWLKKGRPQEKNFLYEIVA
NKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCKVDEKTHICTRDKEVGNLYDM
FHTRNCLHRRAYQHKIGNIIETMITDAFLKADPYIQIEGTGGKKYTLSTAIDDMEAYTKL
TDNIFLEILHSTDPKLAEAREILQKVECRKLYKFVGETQPTGKDRIETDEYDQLPESVAD
SKPESIPLPVELKAEDFVVDVINMDYGMKEKNPIDNVRFYCKSDRNKAVMITKDQVSQLL
PEQFAEQLIRVYCKRTDKQSLDAAGQYFVQWCMNRNFTKPQDGDVVAPKLTPRKPSWNPQ
NRGQDPDGARKGYKPKSNLFGN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcttggtgcgccccaaaagcgtgctcgttgcgggagtcccgacccccctccg
gagcacgccgcagcgcttgccgagtcagcaggcgcggagttccaggacgatggcgatccc
cagagctggggtcccgagcaactgtgcgccttcctcaaccatcagggcttcagcgacccg
gcgctgctcagccgcttccgagaaaacaaaatcagaggttctcagcttctccaccttgat
gaatctcttcttgaaaaccttggagtaaggtcttcagaagacagacagaagctgctggat
tgtgtctataaactgaatcaaagccatgaagatacaatgaaggtatttaatgatcctatc
catggccacatagagcttcacccacttcttatcagaatcattgacacaccccaatttcaa
cgtctgagatatattaaacagctgggaggatcttactatgtttttccaggtgcttcacat
aatcgatttgaacattctttgggtgtcggatatctagcaggatatttggtccgcactctt
caagaaaaacaacccgagctacagataactaatcgggatatgctttgtgttcagatagcg
gggctctgtcatgatctaggtcatggaccattttcacacatgtttgatggaaggtttatt
cctcttgctcgcccagagttgaactggaggcatgaaactgcttcagtcaagatgtttgag
catctggttaatgccaatggaattgaagctgtcatgaggaactatggccttgtcccagaa
gaagatatatgtttcatcaaagaacaaattgaaggatctcttgattcaacagaagagcaa
tctgcgtggctgaagaaagggcgacctcaagagaaaaactttctttatgagatagtggct
aataaacgcaatggcattgatgtggataaatgggattattttgccagggattgccaccat
cttggaattcaaaataattttgactataagcgctttcttaagtttgctcgtgtatgtaaa
gtagacgagaagacacatatttgcaccagagacaaggaagtcggcaatctgtatgacatg
ttccatactcgcaactgcctgcaccgaagagcttaccagcacaaaatcggcaacatcatt
gaaacaatgattacagatgccttccttaaagcagatccctacatacaaatagaaggtaca
ggggggaaaaaatacacgctttctacagcaattgatgatatggaagcctacactaaactc
acagataacatctttctggaaattttgcactctactgatcccaaacttgctgaggcaaga
gagattttgcaaaaagttgaatgtcgtaaattatacaagtttgtgggtgagactcagcca
acagggaaagataggattgaaacggacgaatatgatcaacttccagaaagtgttgcagat
tctaaaccagaaagtatacccctgccagtggaattaaaggctgaagattttgtagttgat
gttatcaacatggattatggaatgaaagaaaaaaatcctattgataatgttcgtttctat
tgtaagagtgaccgaaataaagcagtcatgattacaaaagatcaggtttctcagcttctg
cctgaacaatttgcagaacaacttatccgagtatactgtaagagaacagataagcaaagt
ttagatgctgctggtcaatattttgttcagtggtgtatgaacagaaacttcactaaacca
caggatggtgatgttgtggccccaaaactaactcctaggaaaccgagttggaatccccag
aatagaggccaggatccagatggtgcaagaaagggctacaaacccaaaagcaaccttttt
gggaattga
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